| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800122
Identifier: 108800122
GI number: 108800122
Start: 3348799
End: 3349386
Strand: Reverse
Name: 108800122
Synonym: Mmcs_3156
Alternate gene names: NA
Gene position: 3349386-3348799 (Counterclockwise)
Preceding gene: 108800123
Following gene: 108800121
Centisome position: 58.71
GC content: 70.24
Gene sequence:
>588_bases ATGGCCCGAGCAATTCACGTCTTCCGCACGCCCGACCGCTTTGTGGCCGGGACGGTCGGGCAGCCCGGGAACCGGACGTT CTATCTGCAGGCCGTGCACGACAAGCGCGTGGTCTCGGTGGTGCTGGAGAAGCAGCAGGTGGCCGTGCTGGCCGAACGGA TCGCGGCGCTGCTGCAGGAGATCAACCGGCGCTTCGGCACCCCCATCCCGCCCGACACCGGTGAGGTGGACGATCTGAGC CCGCTGGTGACACCGGTCGACGCGGAGTTCCGGGTCGGCACCATGGGCCTGGGGTGGGACTCCGAGGCGCAGACGATCGT GGTGGAACTGCTCGCGGTGTCCGACACCGAATTCGACGCCTCGGTGGTGCTCGACGACGCCGAGGACGGTCCGGACGCGG TGCGGGTGTTCCTCACCCCGGAGTCGGCGCGCCAGTTCGCCACCCGGTCCAACCGCGTCATCTCGGCCGGCCGCCCGCCC TGCCCGCTGTGCGACGAACCGCTCGACCCGGAGGGGCACATCTGCGTGCGCACCAACGGCTATCGGCGCGGCGCGCTGGC CGGAACCGACGATGACACCGACATCTGA
Upstream 100 bases:
>100_bases ACCGACGGCCGACAGGACGGTTCGGACGAACTGCCCCCGGAAGACGCGGTCGTCGGCGGTTCCACCGGCTGACCCGCCAC CCGGTATTTTGGAAGGTGCC
Downstream 100 bases:
>100_bases GGGCGGCGCAGACAAGGGCGCAGATCAGGGCACCACGATGCGATCGGGGCACCTGACCGTCATCGGGCGGATCCGCTCGG CGAGCAACGCCACGTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MARAIHVFRTPDRFVAGTVGQPGNRTFYLQAVHDKRVVSVVLEKQQVAVLAERIAALLQEINRRFGTPIPPDTGEVDDLS PLVTPVDAEFRVGTMGLGWDSEAQTIVVELLAVSDTEFDASVVLDDAEDGPDAVRVFLTPESARQFATRSNRVISAGRPP CPLCDEPLDPEGHICVRTNGYRRGALAGTDDDTDI
Sequences:
>Translated_195_residues MARAIHVFRTPDRFVAGTVGQPGNRTFYLQAVHDKRVVSVVLEKQQVAVLAERIAALLQEINRRFGTPIPPDTGEVDDLS PLVTPVDAEFRVGTMGLGWDSEAQTIVVELLAVSDTEFDASVVLDDAEDGPDAVRVFLTPESARQFATRSNRVISAGRPP CPLCDEPLDPEGHICVRTNGYRRGALAGTDDDTDI >Mature_194_residues ARAIHVFRTPDRFVAGTVGQPGNRTFYLQAVHDKRVVSVVLEKQQVAVLAERIAALLQEINRRFGTPIPPDTGEVDDLSP LVTPVDAEFRVGTMGLGWDSEAQTIVVELLAVSDTEFDASVVLDDAEDGPDAVRVFLTPESARQFATRSNRVISAGRPPC PLCDEPLDPEGHICVRTNGYRRGALAGTDDDTDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21196; Mature: 21065
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAIHVFRTPDRFVAGTVGQPGNRTFYLQAVHDKRVVSVVLEKQQVAVLAERIAALLQE CCCEEEEEECCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH INRRFGTPIPPDTGEVDDLSPLVTPVDAEFRVGTMGLGWDSEAQTIVVELLAVSDTEFDA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHEEEEEEEHHCCCCCCE SVVLDDAEDGPDAVRVFLTPESARQFATRSNRVISAGRPPCPLCDEPLDPEGHICVRTNG EEEEECCCCCCCEEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEECC YRRGALAGTDDDTDI CCCCCCCCCCCCCCC >Mature Secondary Structure ARAIHVFRTPDRFVAGTVGQPGNRTFYLQAVHDKRVVSVVLEKQQVAVLAERIAALLQE CCEEEEEECCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH INRRFGTPIPPDTGEVDDLSPLVTPVDAEFRVGTMGLGWDSEAQTIVVELLAVSDTEFDA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHEEEEEEEHHCCCCCCE SVVLDDAEDGPDAVRVFLTPESARQFATRSNRVISAGRPPCPLCDEPLDPEGHICVRTNG EEEEECCCCCCCEEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEECC YRRGALAGTDDDTDI CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA