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The map label for this gene is ybbK [C]

Identifier: 108800092

GI number: 108800092

Start: 3318712

End: 3319890

Strand: Reverse

Name: ybbK [C]

Synonym: Mmcs_3126

Alternate gene names: 108800092

Gene position: 3319890-3318712 (Counterclockwise)

Preceding gene: 108800093

Following gene: 108800091

Centisome position: 58.19

GC content: 69.55

Gene sequence:

>1179_bases
GTGGATGGAGCCGTTGCCGGCCTGGTCCTGCTGTTGGTGCTGGTCGTGTTCGCCGTCGTCGTGGTGGCCAAATCGGTCGC
GCTGATCCCGCAGGCCGAGGCCGCGGTCATCGAGCGTCTCGGCCGGTACAGCCGCACCGTCAGCGGCCAACTCACGCTGC
TGATCCCGTTCATCGACAAGATCCGCGCCCGGGTCGACCTGCGTGAGCGGGTGGTGTCCTTCCCGCCGCAGCCGGTGATC
ACCGAGGACAACCTGACGGTCGCCATCGACACCGTCGTCTACTTCCAGGTCACCAACCCGCAGGCGGCGGTCTACCAGAT
CAGCAACTACATCGTCGGCGTCGAGCAACTCACCACCACCACGCTGCGCAACCTCGTCGGCGGTATGACGCTGGAACAGA
CGCTCACCTCGCGCGACCAGATCAACACCGCGCTTCGCGGGGTGCTCGACGAAGCCACCAACCGGTGGGGTCTGCGGGTG
GCGCGCGTCGAACTGCGCGCGATCGACCCGCCGCCGTCGATCCAGGACTCGATGGAAAAGCAGATGCGCGCCGACCGCGA
GAAGCGGGCGATGATCCTGACCGCGGAGGGCAGCCGGGAGGCCGCGATCAAACAGGCCGAAGGACAGAAGCAGGCGCAGA
TCCTGTCCGCCGAGGGCGCCAAACAGGCCGCGATCCTCGCCGCCGAGGCCGAACGGCAGTCGCGCATGCTGCGGGCGCAG
GGCGAGCGTGCCGCCGCGTACCTGCAGGCCCAGGGGCAGGCCAAGGCGATCGAGAAGACGTTCGCGGCGATCAAGGCGGC
CCGGCCGACCCCCGAACTGCTGGCCTACCAGTACCTGCAGACGCTGCCGGAGATGGCCAGGGGTGAGGCCAACAAGGTCT
GGGTCGTGCCAAGCGATTTTGCCGGTGCGCTGGGCGGGTTCACCAAGCTGCTGGGGACGCCCGGCGAGGACGGCGTCATC
CGCTACACCCCCTCGCCCGACGAGGGACGGCCACCGGCGGAGGACGACTCCGAGGAAGTGGCCGACTGGTTCTCCACCGA
GACCGACCCGGCGATCGCGCAGGCGGTCGCCAAGGCCGAGGCCGAGGCCCGCACCCCGATCGAGGGTCCCGGGCTGCTGT
CGTCCACCGAACCGCCCGGCCAGTTGGGCGCACCCCGCCCCGGTGTCACCGACCAATGA

Upstream 100 bases:

>100_bases
CAACGATGTGTACGAACCGGGCGACCAGGTGACCGTCATGCGGATCGACGGCGCCACCGCGGTCGTCTGGAAGAACCCCT
GAGCCGAAGGGAAGTCCGCC

Downstream 100 bases:

>100_bases
GCGCGCTCGGCTCGAAACGGACCTACGCCGCACTCGCGGCGATGCAGGCCGCCGACGCGGCGGCGTGTGTCAAACCGATC
GCGCCGATCAAGAAGGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MDGAVAGLVLLLVLVVFAVVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLIPFIDKIRARVDLRERVVSFPPQPVI
TEDNLTVAIDTVVYFQVTNPQAAVYQISNYIVGVEQLTTTTLRNLVGGMTLEQTLTSRDQINTALRGVLDEATNRWGLRV
ARVELRAIDPPPSIQDSMEKQMRADREKRAMILTAEGSREAAIKQAEGQKQAQILSAEGAKQAAILAAEAERQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAARPTPELLAYQYLQTLPEMARGEANKVWVVPSDFAGALGGFTKLLGTPGEDGVI
RYTPSPDEGRPPAEDDSEEVADWFSTETDPAIAQAVAKAEAEARTPIEGPGLLSSTEPPGQLGAPRPGVTDQ

Sequences:

>Translated_392_residues
MDGAVAGLVLLLVLVVFAVVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLIPFIDKIRARVDLRERVVSFPPQPVI
TEDNLTVAIDTVVYFQVTNPQAAVYQISNYIVGVEQLTTTTLRNLVGGMTLEQTLTSRDQINTALRGVLDEATNRWGLRV
ARVELRAIDPPPSIQDSMEKQMRADREKRAMILTAEGSREAAIKQAEGQKQAQILSAEGAKQAAILAAEAERQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAARPTPELLAYQYLQTLPEMARGEANKVWVVPSDFAGALGGFTKLLGTPGEDGVI
RYTPSPDEGRPPAEDDSEEVADWFSTETDPAIAQAVAKAEAEARTPIEGPGLLSSTEPPGQLGAPRPGVTDQ
>Mature_392_residues
MDGAVAGLVLLLVLVVFAVVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLIPFIDKIRARVDLRERVVSFPPQPVI
TEDNLTVAIDTVVYFQVTNPQAAVYQISNYIVGVEQLTTTTLRNLVGGMTLEQTLTSRDQINTALRGVLDEATNRWGLRV
ARVELRAIDPPPSIQDSMEKQMRADREKRAMILTAEGSREAAIKQAEGQKQAQILSAEGAKQAAILAAEAERQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAARPTPELLAYQYLQTLPEMARGEANKVWVVPSDFAGALGGFTKLLGTPGEDGVI
RYTPSPDEGRPPAEDDSEEVADWFSTETDPAIAQAVAKAEAEARTPIEGPGLLSSTEPPGQLGAPRPGVTDQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=206, Percent_Identity=39.8058252427184, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI21686995, Length=215, Percent_Identity=35.8139534883721, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI221316744, Length=213, Percent_Identity=36.150234741784, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI38016911, Length=209, Percent_Identity=33.9712918660287, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI7657615, Length=188, Percent_Identity=24.468085106383, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI20149563, Length=178, Percent_Identity=28.0898876404494, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1786697, Length=307, Percent_Identity=36.8078175895765, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1790616, Length=208, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI32564147, Length=282, Percent_Identity=35.4609929078014, Blast_Score=161, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17569493, Length=188, Percent_Identity=35.6382978723404, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI193209764, Length=188, Percent_Identity=35.6382978723404, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17570161, Length=233, Percent_Identity=33.9055793991416, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI193210507, Length=233, Percent_Identity=33.9055793991416, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI25153583, Length=207, Percent_Identity=36.231884057971, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71987612, Length=215, Percent_Identity=35.8139534883721, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI71987621, Length=205, Percent_Identity=35.1219512195122, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569499, Length=212, Percent_Identity=34.4339622641509, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI32566490, Length=203, Percent_Identity=32.512315270936, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71989948, Length=158, Percent_Identity=38.6075949367089, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71989955, Length=158, Percent_Identity=38.6075949367089, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=194, Percent_Identity=31.4432989690722, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570459, Length=214, Percent_Identity=34.1121495327103, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71989963, Length=119, Percent_Identity=36.1344537815126, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI45550506, Length=289, Percent_Identity=33.5640138408304, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI281361633, Length=203, Percent_Identity=33.9901477832512, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI281361631, Length=203, Percent_Identity=33.9901477832512, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI18860517, Length=199, Percent_Identity=35.1758793969849, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI21356845, Length=231, Percent_Identity=29.004329004329, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI45556022, Length=201, Percent_Identity=34.8258706467662, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281365664, Length=195, Percent_Identity=36.4102564102564, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24657857, Length=198, Percent_Identity=35.8585858585859, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI62484448, Length=195, Percent_Identity=36.4102564102564, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI62484274, Length=195, Percent_Identity=36.4102564102564, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28573263, Length=204, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281361635, Length=142, Percent_Identity=35.9154929577465, Blast_Score=92, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 42202; Mature: 42202

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGAVAGLVLLLVLVVFAVVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLIPFIDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
IRARVDLRERVVSFPPQPVITEDNLTVAIDTVVYFQVTNPQAAVYQISNYIVGVEQLTTT
HHHHHHHHHHHHCCCCCCCEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
TLRNLVGGMTLEQTLTSRDQINTALRGVLDEATNRWGLRVARVELRAIDPPPSIQDSMEK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHH
QMRADREKRAMILTAEGSREAAIKQAEGQKQAQILSAEGAKQAAILAAEAERQSRMLRAQ
HHHCCHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
GERAAAYLQAQGQAKAIEKTFAAIKAARPTPELLAYQYLQTLPEMARGEANKVWVVPSDF
CHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHH
AGALGGFTKLLGTPGEDGVIRYTPSPDEGRPPAEDDSEEVADWFSTETDPAIAQAVAKAE
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
AEARTPIEGPGLLSSTEPPGQLGAPRPGVTDQ
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDGAVAGLVLLLVLVVFAVVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLIPFIDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
IRARVDLRERVVSFPPQPVITEDNLTVAIDTVVYFQVTNPQAAVYQISNYIVGVEQLTTT
HHHHHHHHHHHHCCCCCCCEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
TLRNLVGGMTLEQTLTSRDQINTALRGVLDEATNRWGLRVARVELRAIDPPPSIQDSMEK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHH
QMRADREKRAMILTAEGSREAAIKQAEGQKQAQILSAEGAKQAAILAAEAERQSRMLRAQ
HHHCCHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
GERAAAYLQAQGQAKAIEKTFAAIKAARPTPELLAYQYLQTLPEMARGEANKVWVVPSDF
CHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHH
AGALGGFTKLLGTPGEDGVIRYTPSPDEGRPPAEDDSEEVADWFSTETDPAIAQAVAKAE
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
AEARTPIEGPGLLSSTEPPGQLGAPRPGVTDQ
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]