| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800082
Identifier: 108800082
GI number: 108800082
Start: 3299666
End: 3301051
Strand: Reverse
Name: 108800082
Synonym: Mmcs_3116
Alternate gene names: NA
Gene position: 3301051-3299666 (Counterclockwise)
Preceding gene: 108800083
Following gene: 108800080
Centisome position: 57.86
GC content: 70.2
Gene sequence:
>1386_bases ATGGCGATCCAGATGCGCCCAGCGACGCTGAGGGCCGGGCGGGGCGAGGACGGTGGGCTCCGCGACGACCACCTGGCCTA CATCGACCAGGCGGCGTACCTGCAGCAGCGCGCCACCGGCGTCGGCAAACTGGCGCAGGCGGTCTGGGTGTACGAGCACC CGCTGAACATGGACGCGCTCAAGAGGTTTCACGCCAACCTCGACCACAGTCTGATCGGCAGGCGGGTCGAGACGTCGGTG CTGCCGTTCGGTCGGCACCGGTGGGTGAGTGCCGAGGGCGCTCCGATCGCGGTCTCCGCGCCGCGGTCCCGCGCCGACCT CAGCGACTGGATCGACGAACGGTCGGCCGTGCCGACCGACCCGGAGATCGGGCCCAGCTGGCATCTCGGCGTACTGCCCA TGGACGACGGTTCGGTCGCGATCAGCCTGGCGGCATCCCACGTCGTCACCGACGGGATCGGGCTGCTGCGCTCGATCGCC GACGCGGCCGAGGGACGCACCCGTCACCTCGGATACGCCCCTGCCCGTTCACGATCCACGTTGACGGCGCTGCGCGCCGA CCTGCGCCAGACCGCCAGGGACATGCCCGAGGTCGGGCGCACCGTGGCCGCAGCGGCCAAACTGGCCTACCGGCGGCGCC ACGAATTGCGGCAGCCCGCTTCGCCGCGCGCCGCGGCGGCGACGGTCGCCGAAGGCGGGAAACCGGTGATCATCCCCGCG ATCACCGCGTTCATCGACGCCAAGCACTGGGATTCCTGTGCCGAGATGCGAAACGGCACCACGTATTCGCTGCTCGCCGG GTTCGCGGCGCGGTTGGCCGAACGCACCGGCAGGCACCGCCCCGACGACGGCGCGGTGTCGTTGTTGATCGCGATCAGTG AGCGCACCCCCGACGACACCCGCGCGAACGCGGTGGCGATCACCAATGCGTGCGTCGATCCCGCCCGGGTGACCGCGGAT CTCTCGGAGAGCCGCATCGCGATCCGGCAGGCGATCACGACGCTGCGCGAGGTCCCCGACGAGACGTTCGCCCTGTTGCC GCTGAACCCGTTCGTGCCCAAACGCGCCGTCAAACGCGCCGCCGACATCATGTTCGGCGACCTACCGGTGTCGTGCTCCA ACCTCGGTGAGATCGACCCCGCGGTGGGCCGGGTGGACGGCACCGACGCGGAGTACTTCATGCTGCGCGGCGTCGACCAG AACCTGACCCGCGAGCAGATCGAGCGCGCCGGTGGACAGCTCGTGGTGGCCAGTGTCCGGCTGGGCGACATGATCTCGCT CGGCATCGTGTCCTACGAACCGGGCCGCACCAACACCAAGCGCCGTCTGCGCGACCTCACGACGCTGACGCTGGCCGAGT TCGACCTCTACGGCGAGATCGTCTGA
Upstream 100 bases:
>100_bases AGCCCGGCGCCACGAACACCAAACCCCATCTGCGCGAACTGACCACGGCGGCGCTGGGCGACTTCGGCCTGACGCCCGCG GTGATCTGAGGGGGTTGTCG
Downstream 100 bases:
>100_bases CCATGTCGGCGCTCCTGACGCGCCGCATCTTCGAGAAGGTCGGCCGCGGTACCCACACTCGAGGCCGGTTTCGTCATCGC TGCGGCGACCTCGCGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MAIQMRPATLRAGRGEDGGLRDDHLAYIDQAAYLQQRATGVGKLAQAVWVYEHPLNMDALKRFHANLDHSLIGRRVETSV LPFGRHRWVSAEGAPIAVSAPRSRADLSDWIDERSAVPTDPEIGPSWHLGVLPMDDGSVAISLAASHVVTDGIGLLRSIA DAAEGRTRHLGYAPARSRSTLTALRADLRQTARDMPEVGRTVAAAAKLAYRRRHELRQPASPRAAAATVAEGGKPVIIPA ITAFIDAKHWDSCAEMRNGTTYSLLAGFAARLAERTGRHRPDDGAVSLLIAISERTPDDTRANAVAITNACVDPARVTAD LSESRIAIRQAITTLREVPDETFALLPLNPFVPKRAVKRAADIMFGDLPVSCSNLGEIDPAVGRVDGTDAEYFMLRGVDQ NLTREQIERAGGQLVVASVRLGDMISLGIVSYEPGRTNTKRRLRDLTTLTLAEFDLYGEIV
Sequences:
>Translated_461_residues MAIQMRPATLRAGRGEDGGLRDDHLAYIDQAAYLQQRATGVGKLAQAVWVYEHPLNMDALKRFHANLDHSLIGRRVETSV LPFGRHRWVSAEGAPIAVSAPRSRADLSDWIDERSAVPTDPEIGPSWHLGVLPMDDGSVAISLAASHVVTDGIGLLRSIA DAAEGRTRHLGYAPARSRSTLTALRADLRQTARDMPEVGRTVAAAAKLAYRRRHELRQPASPRAAAATVAEGGKPVIIPA ITAFIDAKHWDSCAEMRNGTTYSLLAGFAARLAERTGRHRPDDGAVSLLIAISERTPDDTRANAVAITNACVDPARVTAD LSESRIAIRQAITTLREVPDETFALLPLNPFVPKRAVKRAADIMFGDLPVSCSNLGEIDPAVGRVDGTDAEYFMLRGVDQ NLTREQIERAGGQLVVASVRLGDMISLGIVSYEPGRTNTKRRLRDLTTLTLAEFDLYGEIV >Mature_460_residues AIQMRPATLRAGRGEDGGLRDDHLAYIDQAAYLQQRATGVGKLAQAVWVYEHPLNMDALKRFHANLDHSLIGRRVETSVL PFGRHRWVSAEGAPIAVSAPRSRADLSDWIDERSAVPTDPEIGPSWHLGVLPMDDGSVAISLAASHVVTDGIGLLRSIAD AAEGRTRHLGYAPARSRSTLTALRADLRQTARDMPEVGRTVAAAAKLAYRRRHELRQPASPRAAAATVAEGGKPVIIPAI TAFIDAKHWDSCAEMRNGTTYSLLAGFAARLAERTGRHRPDDGAVSLLIAISERTPDDTRANAVAITNACVDPARVTADL SESRIAIRQAITTLREVPDETFALLPLNPFVPKRAVKRAADIMFGDLPVSCSNLGEIDPAVGRVDGTDAEYFMLRGVDQN LTREQIERAGGQLVVASVRLGDMISLGIVSYEPGRTNTKRRLRDLTTLTLAEFDLYGEIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49974; Mature: 49843
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQMRPATLRAGRGEDGGLRDDHLAYIDQAAYLQQRATGVGKLAQAVWVYEHPLNMDAL CCEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHH KRFHANLDHSLIGRRVETSVLPFGRHRWVSAEGAPIAVSAPRSRADLSDWIDERSAVPTD HHHHCCCCHHHHCCHHHHHCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCCC PEIGPSWHLGVLPMDDGSVAISLAASHVVTDGIGLLRSIADAAEGRTRHLGYAPARSRST CCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH LTALRADLRQTARDMPEVGRTVAAAAKLAYRRRHELRQPASPRAAAATVAEGGKPVIIPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEHHH ITAFIDAKHWDSCAEMRNGTTYSLLAGFAARLAERTGRHRPDDGAVSLLIAISERTPDDT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCC RANAVAITNACVDPARVTADLSESRIAIRQAITTLREVPDETFALLPLNPFVPKRAVKRA CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH ADIMFGDLPVSCSNLGEIDPAVGRVDGTDAEYFMLRGVDQNLTREQIERAGGQLVVASVR HHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEEC LGDMISLGIVSYEPGRTNTKRRLRDLTTLTLAEFDLYGEIV CCCEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AIQMRPATLRAGRGEDGGLRDDHLAYIDQAAYLQQRATGVGKLAQAVWVYEHPLNMDAL CEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHH KRFHANLDHSLIGRRVETSVLPFGRHRWVSAEGAPIAVSAPRSRADLSDWIDERSAVPTD HHHHCCCCHHHHCCHHHHHCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCCC PEIGPSWHLGVLPMDDGSVAISLAASHVVTDGIGLLRSIADAAEGRTRHLGYAPARSRST CCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH LTALRADLRQTARDMPEVGRTVAAAAKLAYRRRHELRQPASPRAAAATVAEGGKPVIIPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEHHH ITAFIDAKHWDSCAEMRNGTTYSLLAGFAARLAERTGRHRPDDGAVSLLIAISERTPDDT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCC RANAVAITNACVDPARVTADLSESRIAIRQAITTLREVPDETFALLPLNPFVPKRAVKRA CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH ADIMFGDLPVSCSNLGEIDPAVGRVDGTDAEYFMLRGVDQNLTREQIERAGGQLVVASVR HHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEEC LGDMISLGIVSYEPGRTNTKRRLRDLTTLTLAEFDLYGEIV CCCEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA