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The map label for this gene is uidR [C]

Identifier: 108800054

GI number: 108800054

Start: 3267765

End: 3268472

Strand: Reverse

Name: uidR [C]

Synonym: Mmcs_3088

Alternate gene names: 108800054

Gene position: 3268472-3267765 (Counterclockwise)

Preceding gene: 108800055

Following gene: 108800053

Centisome position: 57.29

GC content: 69.07

Gene sequence:

>708_bases
GTGCAGCGGAAGGGGCGGGCCAGGGCAGCGGCGCGCGCCCGGGGGCGGCCGGTTGGGGCCGATTCCGCGGAAACCCGTAG
GCAGATCGTCCGCGCCGGGCGCGTGGTCCTCATCGAGCGGGGCTACTCCGGTATGACGTTCCAGGCCATCGCCGAACGCA
CCGGGCTGAGCCGGCCGACCCTGCACTACTACTTCGCCACCCGCGAAGAGGTCTACGAAGGCATCGTCACGGAGATGCGC
GAGATCGTGGTCGACTGCGTCGAGCACTCGCTACGGCACGACCGGTTGCTCGACCGGTTGGCGGCGTTCGTGGCCGCCGT
GCGGCGCGTCGACCATCGGGATCCGTCGGTGGTGCCGTTCCTGATCAGCGCGCGCCTCGAACCGCAGCGCAATCCCGAAT
TGCAGGCGATCAGCGAGTCGCCGGTCCGGGCCTTCCTGATGCGGTTGGTCTCCGATGCGATCCGCCGCGGTGAACTCGAC
GACGACACCGACGTCGAGGGCGTCTCCGACATGCTCCACGTCATCCTGTACGGGATGGCGTTCTATTCCGGTTTCACCAA
CGGCCCCGCGGAGTTGGGCACGATTGCCAAGCAACTGATCGAATTGTTCGCCCACGGCCTGGTGGCAGGCCCGCGCGGGC
CGGATCCCGCCGGCGGGGGTGAAGACACGCTCCGCGACACGCCGAAGGGTGTCGGACCGCGGTCCTAG

Upstream 100 bases:

>100_bases
ACTGAGAGCGCATCTACGGCAACGCCTGCGGTGAGAAACGCGAGTTCGTTTGCCGGACAGGTGTTTGCCTGGTGTTCAGC
AATGTCCTAGCGTTTGCTAG

Downstream 100 bases:

>100_bases
ACTGACGACCCTATGAGTGGTTCAGACGGTCGGTCCTCGGGGTCTTTTGTTCACCTGCACAACCACACCGAGTATTCGAT
GCTGGACGGCGCCGCCAAGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; LOW QUALITY PROTEIN Transcriptional Regulator TetR-Family

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MQRKGRARAAARARGRPVGADSAETRRQIVRAGRVVLIERGYSGMTFQAIAERTGLSRPTLHYYFATREEVYEGIVTEMR
EIVVDCVEHSLRHDRLLDRLAAFVAAVRRVDHRDPSVVPFLISARLEPQRNPELQAISESPVRAFLMRLVSDAIRRGELD
DDTDVEGVSDMLHVILYGMAFYSGFTNGPAELGTIAKQLIELFAHGLVAGPRGPDPAGGGEDTLRDTPKGVGPRS

Sequences:

>Translated_235_residues
MQRKGRARAAARARGRPVGADSAETRRQIVRAGRVVLIERGYSGMTFQAIAERTGLSRPTLHYYFATREEVYEGIVTEMR
EIVVDCVEHSLRHDRLLDRLAAFVAAVRRVDHRDPSVVPFLISARLEPQRNPELQAISESPVRAFLMRLVSDAIRRGELD
DDTDVEGVSDMLHVILYGMAFYSGFTNGPAELGTIAKQLIELFAHGLVAGPRGPDPAGGGEDTLRDTPKGVGPRS
>Mature_235_residues
MQRKGRARAAARARGRPVGADSAETRRQIVRAGRVVLIERGYSGMTFQAIAERTGLSRPTLHYYFATREEVYEGIVTEMR
EIVVDCVEHSLRHDRLLDRLAAFVAAVRRVDHRDPSVVPFLISARLEPQRNPELQAISESPVRAFLMRLVSDAIRRGELD
DDTDVEGVSDMLHVILYGMAFYSGFTNGPAELGTIAKQLIELFAHGLVAGPRGPDPAGGGEDTLRDTPKGVGPRS

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25918; Mature: 25918

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKGRARAAARARGRPVGADSAETRRQIVRAGRVVLIERGYSGMTFQAIAERTGLSRPT
CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCC
LHYYFATREEVYEGIVTEMREIVVDCVEHSLRHDRLLDRLAAFVAAVRRVDHRDPSVVPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LISARLEPQRNPELQAISESPVRAFLMRLVSDAIRRGELDDDTDVEGVSDMLHVILYGMA
HHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
FYSGFTNGPAELGTIAKQLIELFAHGLVAGPRGPDPAGGGEDTLRDTPKGVGPRS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MQRKGRARAAARARGRPVGADSAETRRQIVRAGRVVLIERGYSGMTFQAIAERTGLSRPT
CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCC
LHYYFATREEVYEGIVTEMREIVVDCVEHSLRHDRLLDRLAAFVAAVRRVDHRDPSVVPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LISARLEPQRNPELQAISESPVRAFLMRLVSDAIRRGELDDDTDVEGVSDMLHVILYGMA
HHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
FYSGFTNGPAELGTIAKQLIELFAHGLVAGPRGPDPAGGGEDTLRDTPKGVGPRS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA