| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is fabH [H]
Identifier: 108799902
GI number: 108799902
Start: 3093726
End: 3094739
Strand: Reverse
Name: fabH [H]
Synonym: Mmcs_2936
Alternate gene names: 108799902
Gene position: 3094739-3093726 (Counterclockwise)
Preceding gene: 108799903
Following gene: 108799901
Centisome position: 54.24
GC content: 66.77
Gene sequence:
>1014_bases ATGACTGTGAGCCTGCTCGACGTCTCGACCTATCTTCCCGGCGAACCCATCAGCGCCGATTACTACGCCGACTTCGCCAG CGCCGACGACCTCCGCGAGCACCTGATGTTCCGGGCGCCGAAATTCCGCCACCACGTCGCCGAGGACGAGACGGCCATCG ACATGGTCGAACGTGCGACCGCCGGCCTGGTGCAACGGCACGGCCACGACACGATCGCCGACATCGACATCCTCATCACC CACACCCAGATGCCCGATATGCCGTTCTACGGAGGCGGCGGCGGCATGGCCCATCGCCTCGGGATGAAACCGCGCACCGT GATCGACCTGCACAACGGTGGATGCGCGGCGTTCATCCTCGGTCTGCAGCTGGCGCGCACGCTGATCCAGGCCGGCGAAG GGCGCACCGCCATGATCGCGTTGGCGCAGAACGCCGCCGGGCAGATCTTCGACCAGCCGCTCACCCGGCAGAAGGCCCAG TCGTGTGTACCCGGTGACGGTGCCGCCGTCGGCCTGGTCGCGCTGTCCGACGAATCTCCCGTGCTCGACGTGGAGTGCCG TACCTACGGCGAATACGCCGGTGACATGACGATCGCGGTCGAACCGTTCCGCAAGTGGTGGCAGCCCGGTCCGGGGGAGG GCTGCATCGGATTCACCGAGGCCAAGATCACCAAGGTGCTCGCCCGCGGCAACCGACAGGTTCCGGAGGTGTCCTTCGCG GTGTGTGACCGGTTGGGCATCAAACCCAAAGAGCTCGATCTGTTCGTCACCAACCAGCCCAACCGCGTGTTCCTGCGCAA CTGGCGCGATGCGCTGGAGCTGCCGAAGGAACGTCACCGCGACACGTTCGACGAGTGCGGGAACCTGTTCGCGGTCGGTG TCCCGATGAACCTCGACCGCGCGATCAGCGACGGCCAACTCAAACGCGGCGACACCGTGCTGATGGCCGCGTTCGCCCAC GCCGGCGACTTCGCCGGCGCCGCGGCCGTGCGGTGGGGTGGTCGATCAGCATGA
Upstream 100 bases:
>100_bases CGGCCACCTGCTCGAGCTGAAGAATCTGAAGGCGATCGCCGAATTCCGCCATCGCAACGGTCTGCCGATCAAACCGGCCT GGATGGACTGAGGGCACGAG
Downstream 100 bases:
>100_bases CCATCGTCGCCGAACCGGGACCAGCAACGTCACCACCGGGGCCCGTGCAGCCCAGGATCTCCTCACTGCCCACGGCGGTC GATCCGATGGCGTTGTCGCT
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTVSLLDVSTYLPGEPISADYYADFASADDLREHLMFRAPKFRHHVAEDETAIDMVERATAGLVQRHGHDTIADIDILIT HTQMPDMPFYGGGGGMAHRLGMKPRTVIDLHNGGCAAFILGLQLARTLIQAGEGRTAMIALAQNAAGQIFDQPLTRQKAQ SCVPGDGAAVGLVALSDESPVLDVECRTYGEYAGDMTIAVEPFRKWWQPGPGEGCIGFTEAKITKVLARGNRQVPEVSFA VCDRLGIKPKELDLFVTNQPNRVFLRNWRDALELPKERHRDTFDECGNLFAVGVPMNLDRAISDGQLKRGDTVLMAAFAH AGDFAGAAAVRWGGRSA
Sequences:
>Translated_337_residues MTVSLLDVSTYLPGEPISADYYADFASADDLREHLMFRAPKFRHHVAEDETAIDMVERATAGLVQRHGHDTIADIDILIT HTQMPDMPFYGGGGGMAHRLGMKPRTVIDLHNGGCAAFILGLQLARTLIQAGEGRTAMIALAQNAAGQIFDQPLTRQKAQ SCVPGDGAAVGLVALSDESPVLDVECRTYGEYAGDMTIAVEPFRKWWQPGPGEGCIGFTEAKITKVLARGNRQVPEVSFA VCDRLGIKPKELDLFVTNQPNRVFLRNWRDALELPKERHRDTFDECGNLFAVGVPMNLDRAISDGQLKRGDTVLMAAFAH AGDFAGAAAVRWGGRSA >Mature_336_residues TVSLLDVSTYLPGEPISADYYADFASADDLREHLMFRAPKFRHHVAEDETAIDMVERATAGLVQRHGHDTIADIDILITH TQMPDMPFYGGGGGMAHRLGMKPRTVIDLHNGGCAAFILGLQLARTLIQAGEGRTAMIALAQNAAGQIFDQPLTRQKAQS CVPGDGAAVGLVALSDESPVLDVECRTYGEYAGDMTIAVEPFRKWWQPGPGEGCIGFTEAKITKVLARGNRQVPEVSFAV CDRLGIKPKELDLFVTNQPNRVFLRNWRDALELPKERHRDTFDECGNLFAVGVPMNLDRAISDGQLKRGDTVLMAAFAHA GDFAGAAAVRWGGRSA
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 36648; Mature: 36517
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSLLDVSTYLPGEPISADYYADFASADDLREHLMFRAPKFRHHVAEDETAIDMVERAT CEEEEEEEHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH AGLVQRHGHDTIADIDILITHTQMPDMPFYGGGGGMAHRLGMKPRTVIDLHNGGCAAFIL HHHHHHCCCCCEEEEEEEEEECCCCCCCEECCCCCHHHHCCCCCCEEEEECCCCHHHHHH GLQLARTLIQAGEGRTAMIALAQNAAGQIFDQPLTRQKAQSCVPGDGAAVGLVALSDESP HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCHHHHHHHHHCCCCCCCEEEEEEECCCCC VLDVECRTYGEYAGDMTIAVEPFRKWWQPGPGEGCIGFTEAKITKVLARGNRQVPEVSFA EEEEEEEECCCCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH VCDRLGIKPKELDLFVTNQPNRVFLRNWRDALELPKERHRDTFDECGNLFAVGVPMNLDR HHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHHCCHHHCCCCHHHCCCEEEEECCCCCCC AISDGQLKRGDTVLMAAFAHAGDFAGAAAVRWGGRSA CCCCCCCCCCCEEEEEEHHHCCCCCCCCEEECCCCCC >Mature Secondary Structure TVSLLDVSTYLPGEPISADYYADFASADDLREHLMFRAPKFRHHVAEDETAIDMVERAT EEEEEEEHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH AGLVQRHGHDTIADIDILITHTQMPDMPFYGGGGGMAHRLGMKPRTVIDLHNGGCAAFIL HHHHHHCCCCCEEEEEEEEEECCCCCCCEECCCCCHHHHCCCCCCEEEEECCCCHHHHHH GLQLARTLIQAGEGRTAMIALAQNAAGQIFDQPLTRQKAQSCVPGDGAAVGLVALSDESP HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCHHHHHHHHHCCCCCCCEEEEEEECCCCC VLDVECRTYGEYAGDMTIAVEPFRKWWQPGPGEGCIGFTEAKITKVLARGNRQVPEVSFA EEEEEEEECCCCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH VCDRLGIKPKELDLFVTNQPNRVFLRNWRDALELPKERHRDTFDECGNLFAVGVPMNLDR HHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHHCCHHHCCCCHHHCCCEEEEECCCCCCC AISDGQLKRGDTVLMAAFAHAGDFAGAAAVRWGGRSA CCCCCCCCCCCEEEEEEHHHCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA