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The map label for this gene is yhbO [H]

Identifier: 108799848

GI number: 108799848

Start: 3046632

End: 3047189

Strand: Reverse

Name: yhbO [H]

Synonym: Mmcs_2882

Alternate gene names: 108799848

Gene position: 3047189-3046632 (Counterclockwise)

Preceding gene: 108799852

Following gene: 108799847

Centisome position: 53.41

GC content: 67.92

Gene sequence:

>558_bases
ATGCCGAAGGAACTACAGGGCCGCAAGATCGCCATCCTCGCCGCGGACGGCGTGGAGAAGGTCGAACTCGAACAGCCGCG
CGCGGCGGTCGAAACCGCGGGCGGACAGGTCGAACTGCTGTCGCTCGAACCCGGCGAGATCGAGGCACGCAACCACGATC
TCGAACCCGCGGGTTCGTTCTCCGTCGACCGCCCGGTCGGTGAGGCGCGGGTCGAGGAGTTCGACGCGCTCGTCCTGCCC
GGGGGCACGGTCAATCCCGACAAGCTGCGCCTCGACGAATCGGCCGTGGCGTTCGTACGGGACTTCGTGCGCTCCGGTAA
GCCCGTCGCCGCGATCTGCCACGGTCCCTGGACCCTGGTGGAGGCCGACGTCGTGCGGGACCGCACGCTCACGTCGTACC
CGAGCATCCGCACCGATCTGCGCAACGCCGGGGCCACCGTCGTCGACCAACAGGTGTGCATCGACGGGAACCTGATCACC
AGCCGGTCGCCGAAAGACCTGCCCGCCTTTTGTCAGGCGATCACCGATCAGTTCGCCAACACTCCCGCGCACACCTGA

Upstream 100 bases:

>100_bases
AGTGCGGCGGGGATCACGACCGAAAGCCTACGGAGGTGTTCGAGGTGTTCGATCCCGTTCACGCGGGTACGCCTGATTCC
GTCGCAGAAAGGACTTCCAC

Downstream 100 bases:

>100_bases
TCGATGACCTCCGTCGTCATCGTCGGCAGCGGGTTCACCGGTTTCGAGTGCGCCCGTCATCTGGCCCGCAAGCTGCGCAA
GAGCGAGGGGACCGGCTCGG

Product: peptidase C56, PfpI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MPKELQGRKIAILAADGVEKVELEQPRAAVETAGGQVELLSLEPGEIEARNHDLEPAGSFSVDRPVGEARVEEFDALVLP
GGTVNPDKLRLDESAVAFVRDFVRSGKPVAAICHGPWTLVEADVVRDRTLTSYPSIRTDLRNAGATVVDQQVCIDGNLIT
SRSPKDLPAFCQAITDQFANTPAHT

Sequences:

>Translated_185_residues
MPKELQGRKIAILAADGVEKVELEQPRAAVETAGGQVELLSLEPGEIEARNHDLEPAGSFSVDRPVGEARVEEFDALVLP
GGTVNPDKLRLDESAVAFVRDFVRSGKPVAAICHGPWTLVEADVVRDRTLTSYPSIRTDLRNAGATVVDQQVCIDGNLIT
SRSPKDLPAFCQAITDQFANTPAHT
>Mature_184_residues
PKELQGRKIAILAADGVEKVELEQPRAAVETAGGQVELLSLEPGEIEARNHDLEPAGSFSVDRPVGEARVEEFDALVLPG
GTVNPDKLRLDESAVAFVRDFVRSGKPVAAICHGPWTLVEADVVRDRTLTSYPSIRTDLRNAGATVVDQQVCIDGNLITS
RSPKDLPAFCQAITDQFANTPAHT

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=165, Percent_Identity=44.8484848484849, Blast_Score=131, Evalue=3e-32,
Organism=Drosophila melanogaster, GI28571932, Length=173, Percent_Identity=32.3699421965318, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19910; Mature: 19778

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKELQGRKIAILAADGVEKVELEQPRAAVETAGGQVELLSLEPGEIEARNHDLEPAGSF
CCCCCCCCEEEEEECCCCCEEECCCCHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCC
SVDRPVGEARVEEFDALVLPGGTVNPDKLRLDESAVAFVRDFVRSGKPVAAICHGPWTLV
CCCCCCCHHHHHHCCEEEECCCCCCHHHEEECHHHHHHHHHHHHCCCCEEEEECCCEEEE
EADVVRDRTLTSYPSIRTDLRNAGATVVDQQVCIDGNLITSRSPKDLPAFCQAITDQFAN
EHHHHHCCCCCCCCCHHHHHHHCCCEEECCEEEECCCEECCCCCCCHHHHHHHHHHHHCC
TPAHT
CCCCC
>Mature Secondary Structure 
PKELQGRKIAILAADGVEKVELEQPRAAVETAGGQVELLSLEPGEIEARNHDLEPAGSF
CCCCCCCEEEEEECCCCCEEECCCCHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCC
SVDRPVGEARVEEFDALVLPGGTVNPDKLRLDESAVAFVRDFVRSGKPVAAICHGPWTLV
CCCCCCCHHHHHHCCEEEECCCCCCHHHEEECHHHHHHHHHHHHCCCCEEEEECCCEEEE
EADVVRDRTLTSYPSIRTDLRNAGATVVDQQVCIDGNLITSRSPKDLPAFCQAITDQFAN
EHHHHHCCCCCCCCCHHHHHHHCCCEEECCEEEECCCEECCCCCCCHHHHHHHHHHHHCC
TPAHT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]