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The map label for this gene is ucpA [C]

Identifier: 108799837

GI number: 108799837

Start: 3038524

End: 3039219

Strand: Reverse

Name: ucpA [C]

Synonym: Mmcs_2871

Alternate gene names: 108799837

Gene position: 3039219-3038524 (Counterclockwise)

Preceding gene: 108799838

Following gene: 108799834

Centisome position: 53.27

GC content: 68.39

Gene sequence:

>696_bases
GTGATCGCCGCCGACGAAGCGCAAATTCACGTTGCAGCGCAAGAGCTTTCGAGGATCGGCCGGGCAGTGACCCCGGTCCA
GGTGGACCTGCGCACCGAAGCGGGCGTCTCCGCGCTCTACCAGAAGGCCACGGCGGACGGGCGTCGGCTGGATGCGGTGG
CGATCAACGCCGGGATCGGGCGGGCGGGCCGGTTCGTCGACGGCGACCTTCACGAAGACCTCGCGATCGTCGACCTCAAC
GTGCGCTCCACTGTGCACCTGGCGAGGCTGGTGCTGGGCGATATGGTCGACCGCGGCAGTGGCCGGGTGCTGTTCACGTC
GTCGACGGTCGCCGCGATGCCCGGGTCTCACCAGAGCATCTACAACGCGTCGAAGTCGTTCGTGCAGAGCTTCGCCGAGG
CGCTCCACGACGAAATACGCGACACCGGGGTGACGGTCACCGCGCTGATGCCCGGTCCGGTTGACACCGCGTTCTTCACC
CGCGCCAAGATGCGCAACACCCCGGTCGGCGGTCCGCTGCCCAAGGACGATCCGGCGGACGTCGCCAGGCAGGGTTACGA
GGCGATGATGCGCGGCGACCGGAAGGTGGTCGCGTCGTCGCTGATGTCGAAGGCGTTGGGCGCGGTGAACACGGTGCTGC
CCGACGGCGTCAAGGCGCGGATGAACCGGTTGATCGCCAGGCCGATGGGCCGCTGA

Upstream 100 bases:

>100_bases
CGAAACGACCACCGCAACGAAGCTGGCACTGGTCACCGGCGCGTCCACGGGTATCGGGTTCGAACTGGCCAAGCTGTTCG
CCCGCGACGGGTACGAGCTG

Downstream 100 bases:

>100_bases
GGTCAGCCGACCGGCGGCGGGGTCCCCGCGCCGGGTGCCCCCTGGATCGGCACGATCGGGGTGGGCGTCACCGTCGTGAT
GCCGTTGGACCCCACCCGGG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIAADEAQIHVAAQELSRIGRAVTPVQVDLRTEAGVSALYQKATADGRRLDAVAINAGIGRAGRFVDGDLHEDLAIVDLN
VRSTVHLARLVLGDMVDRGSGRVLFTSSTVAAMPGSHQSIYNASKSFVQSFAEALHDEIRDTGVTVTALMPGPVDTAFFT
RAKMRNTPVGGPLPKDDPADVARQGYEAMMRGDRKVVASSLMSKALGAVNTVLPDGVKARMNRLIARPMGR

Sequences:

>Translated_231_residues
MIAADEAQIHVAAQELSRIGRAVTPVQVDLRTEAGVSALYQKATADGRRLDAVAINAGIGRAGRFVDGDLHEDLAIVDLN
VRSTVHLARLVLGDMVDRGSGRVLFTSSTVAAMPGSHQSIYNASKSFVQSFAEALHDEIRDTGVTVTALMPGPVDTAFFT
RAKMRNTPVGGPLPKDDPADVARQGYEAMMRGDRKVVASSLMSKALGAVNTVLPDGVKARMNRLIARPMGR
>Mature_231_residues
MIAADEAQIHVAAQELSRIGRAVTPVQVDLRTEAGVSALYQKATADGRRLDAVAINAGIGRAGRFVDGDLHEDLAIVDLN
VRSTVHLARLVLGDMVDRGSGRVLFTSSTVAAMPGSHQSIYNASKSFVQSFAEALHDEIRDTGVTVTALMPGPVDTAFFT
RAKMRNTPVGGPLPKDDPADVARQGYEAMMRGDRKVVASSLMSKALGAVNTVLPDGVKARMNRLIARPMGR

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI223718074, Length=158, Percent_Identity=32.2784810126582, Blast_Score=68, Evalue=8e-12,
Organism=Escherichia coli, GI87082100, Length=186, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787820, Length=154, Percent_Identity=27.9220779220779, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24576; Mature: 24576

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAADEAQIHVAAQELSRIGRAVTPVQVDLRTEAGVSALYQKATADGRRLDAVAINAGIG
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCC
RAGRFVDGDLHEDLAIVDLNVRSTVHLARLVLGDMVDRGSGRVLFTSSTVAAMPGSHQSI
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCHHHH
YNASKSFVQSFAEALHDEIRDTGVTVTALMPGPVDTAFFTRAKMRNTPVGGPLPKDDPAD
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHH
VARQGYEAMMRGDRKVVASSLMSKALGAVNTVLPDGVKARMNRLIARPMGR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIAADEAQIHVAAQELSRIGRAVTPVQVDLRTEAGVSALYQKATADGRRLDAVAINAGIG
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCC
RAGRFVDGDLHEDLAIVDLNVRSTVHLARLVLGDMVDRGSGRVLFTSSTVAAMPGSHQSI
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCHHHH
YNASKSFVQSFAEALHDEIRDTGVTVTALMPGPVDTAFFTRAKMRNTPVGGPLPKDDPAD
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHH
VARQGYEAMMRGDRKVVASSLMSKALGAVNTVLPDGVKARMNRLIARPMGR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]