| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799814
Identifier: 108799814
GI number: 108799814
Start: 3011960
End: 3012874
Strand: Reverse
Name: 108799814
Synonym: Mmcs_2848
Alternate gene names: NA
Gene position: 3012874-3011960 (Counterclockwise)
Preceding gene: 108799815
Following gene: 108799813
Centisome position: 52.81
GC content: 71.91
Gene sequence:
>915_bases GTGGCTGAGCCGAACAGACTGCTGGGCGGATTCGACCCCGAGGCGGGTCTCAAGCATCACGACGCCGCCGGGCCCCAGAA GATCCCGGTGCCCTCGCTGCTGCGGTCATTGCTCTCCGAACATCTCGACCCCGGCTACGCGGCCGCGGCCGCCGCGCGAC GCGAGGGCGCCAGACGGCCCCGCGCCGTCGAGTGGGGTTGGCAGTTGGCCGCGGCGCTCACCGTCGCAACGGTCTTCGGC GTCGCCGCCGCGCAGGCGCAGACCGCCGCCCCCGCCACGCGCGAAGCCCAGCAGGTCCTCGCCGGGAGCGTGCGTGCCGC CGAGGCGGCCGACCAACAGCTCACCGCGCAGCGCAACGCGCTGACCACGCAGGTCGCCGCGGAGCGCCGCAGTCGACTCG AGGGCGACGAACGCGGCAGGCAACTGCTGGCCGACCTCGACGTCGCCGACGTCGCCGCGGCCGCGACACCGGTGATCGGT CCCGGGTTGACGGTCGCCGTCACCGATCCCGGTCTGTCGAACGACCTGTCCGACGTGTCGAAACAACGCGTCGCAGGCAG CAGGCAGGTCATCCTCGACCGCGATCTGCAGTTGGTGGTCAACTCGCTGTGGGTCAGCGGTGCCGAGGCGGTGGCCGTCG GGGGAGTGCGCATCGGACCCAACGTCACCATCCGGCAGGCCGGCGGCGGGATCCTCGTCGACAACCAGCCCGTCAGCAGC CCGTACCTCGTACAGGCGGTCGGTCCGCCGAAGTCGATGGTCGACACGTTCGACCGCAGCGCCGGGCTGCAGCGGCTGCG GCTGCTCGAAACCTCCTACGGCGTCGGGGTTTCCGTCAGCACCGCGGACGCGCTCACCCTGCCCGCCGGTTCGGTGCGGG AGGTCAACTTCGCCAAGCAGATCGGAGCCAGATGA
Upstream 100 bases:
>100_bases GGTTTCCTGGGCTGGGGGATGGCGCTGTACCTGTGGTCCGGGGTGCTGTATCTGGTGCAGGTGGTGATGGTCGCCCAGCG ATTGCCGAAGGTCCGGACCG
Downstream 100 bases:
>100_bases TCGGAATCGCCGCGCTGCTCGCCGGTATCGTCCTGGGGCTGGTCTTCCGCCCGAGCGTGCCGGACTTCGTCGAGCCCTAT CTGCCGATCGCGGTCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAEPNRLLGGFDPEAGLKHHDAAGPQKIPVPSLLRSLLSEHLDPGYAAAAAARREGARRPRAVEWGWQLAAALTVATVFG VAAAQAQTAAPATREAQQVLAGSVRAAEAADQQLTAQRNALTTQVAAERRSRLEGDERGRQLLADLDVADVAAAATPVIG PGLTVAVTDPGLSNDLSDVSKQRVAGSRQVILDRDLQLVVNSLWVSGAEAVAVGGVRIGPNVTIRQAGGGILVDNQPVSS PYLVQAVGPPKSMVDTFDRSAGLQRLRLLETSYGVGVSVSTADALTLPAGSVREVNFAKQIGAR
Sequences:
>Translated_304_residues MAEPNRLLGGFDPEAGLKHHDAAGPQKIPVPSLLRSLLSEHLDPGYAAAAAARREGARRPRAVEWGWQLAAALTVATVFG VAAAQAQTAAPATREAQQVLAGSVRAAEAADQQLTAQRNALTTQVAAERRSRLEGDERGRQLLADLDVADVAAAATPVIG PGLTVAVTDPGLSNDLSDVSKQRVAGSRQVILDRDLQLVVNSLWVSGAEAVAVGGVRIGPNVTIRQAGGGILVDNQPVSS PYLVQAVGPPKSMVDTFDRSAGLQRLRLLETSYGVGVSVSTADALTLPAGSVREVNFAKQIGAR >Mature_303_residues AEPNRLLGGFDPEAGLKHHDAAGPQKIPVPSLLRSLLSEHLDPGYAAAAAARREGARRPRAVEWGWQLAAALTVATVFGV AAAQAQTAAPATREAQQVLAGSVRAAEAADQQLTAQRNALTTQVAAERRSRLEGDERGRQLLADLDVADVAAAATPVIGP GLTVAVTDPGLSNDLSDVSKQRVAGSRQVILDRDLQLVVNSLWVSGAEAVAVGGVRIGPNVTIRQAGGGILVDNQPVSSP YLVQAVGPPKSMVDTFDRSAGLQRLRLLETSYGVGVSVSTADALTLPAGSVREVNFAKQIGAR
Specific function: Unknown
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 31543; Mature: 31412
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPNRLLGGFDPEAGLKHHDAAGPQKIPVPSLLRSLLSEHLDPGYAAAAAARREGARRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC RAVEWGWQLAAALTVATVFGVAAAQAQTAAPATREAQQVLAGSVRAAEAADQQLTAQRNA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTQVAAERRSRLEGDERGRQLLADLDVADVAAAATPVIGPGLTVAVTDPGLSNDLSDVS HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH KQRVAGSRQVILDRDLQLVVNSLWVSGAEAVAVGGVRIGPNVTIRQAGGGILVDNQPVSS HHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCEEECCCEEEEECCCEEEECCCCCCC PYLVQAVGPPKSMVDTFDRSAGLQRLRLLETSYGVGVSVSTADALTLPAGSVREVNFAKQ CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCHHHHHHHH IGAR HCCC >Mature Secondary Structure AEPNRLLGGFDPEAGLKHHDAAGPQKIPVPSLLRSLLSEHLDPGYAAAAAARREGARRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC RAVEWGWQLAAALTVATVFGVAAAQAQTAAPATREAQQVLAGSVRAAEAADQQLTAQRNA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTQVAAERRSRLEGDERGRQLLADLDVADVAAAATPVIGPGLTVAVTDPGLSNDLSDVS HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH KQRVAGSRQVILDRDLQLVVNSLWVSGAEAVAVGGVRIGPNVTIRQAGGGILVDNQPVSS HHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCEEECCCEEEEECCCEEEECCCCCCC PYLVQAVGPPKSMVDTFDRSAGLQRLRLLETSYGVGVSVSTADALTLPAGSVREVNFAKQ CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCHHHHHHHH IGAR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]