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The map label for this gene is ureD1 [H]

Identifier: 108799768

GI number: 108799768

Start: 2949533

End: 2950165

Strand: Reverse

Name: ureD1 [H]

Synonym: Mmcs_2802

Alternate gene names: 108799768

Gene position: 2950165-2949533 (Counterclockwise)

Preceding gene: 108799769

Following gene: 108799764

Centisome position: 51.71

GC content: 72.67

Gene sequence:

>633_bases
GTGCGCTCCGACGTCGTCATCGTCGCCTGCGCGGGGCGTGGCCCCCGCATCGAGCACACCGGGGGGATCGCGGTGCGCCG
CACCGGGTCCGACACGGTGTACCTGGTGTCCGCCGCGGCCACCCCGCTCGGCGGCGACGTCATCAACGTGCGCGTCGTGG
TGGAACCGGGGGCCCGGCTCGTGGTGCGCAGCGCCGCGGCGACCGTGACGCTGCCGAGCGCGGCCACCCCGGAGTCGCAG
ACGTGCTGGGACATCGAATCGGCAGGCGCACTCGACATCGACCCGCAACCCACCGTCGTCGCGGGCGCCTCCCGCCACCT
GACGACCACCCGCATACGGCTGACCGATGCGGGCAGCATCCGCCTACGAGAGCGGGTTCAGATCGGCAGATCGGGTGAGC
GCGAAGGCTTCTGGTCCGGTGCGCTGCACGCCGACGTCGACGGGGCGCCGCTGCTGCGGCACCGTGTCGAACTCGGCACC
GGATCGGTCACGGATGACGCGCTCGGCCGCCCGCTGGCTTGCGTCAGCGAACTGCGTTACCCCGAACCGTCATTCGCGTC
CGACGGGACGGTGCTCGCGCTTGCGGCGGGCGGCTGCCTGGCAACCTGGCAGGGCGAGCGGCTGACTAACTAG

Upstream 100 bases:

>100_bases
GAGAGCGGCCCTTCGTACTCATCTCGCTGACCGCCGATCCGACGGCCGGGCCGGTGCTGGACTGGGTGCGGGCGCAACTG
CGGGTGCCGGTGCAGGGCTA

Downstream 100 bases:

>100_bases
CCGCCTGCTCCCGCTCGCGTTCGGTGTCAGTGACCGCCGCGGCGATCTCCTCGAGTTCCTCGATCCGCGTTCGGGCGTAC
GCCTGCTGTTCGGTGATCGT

Product: putative urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRSDVVIVACAGRGPRIEHTGGIAVRRTGSDTVYLVSAAATPLGGDVINVRVVVEPGARLVVRSAAATVTLPSAATPESQ
TCWDIESAGALDIDPQPTVVAGASRHLTTTRIRLTDAGSIRLRERVQIGRSGEREGFWSGALHADVDGAPLLRHRVELGT
GSVTDDALGRPLACVSELRYPEPSFASDGTVLALAAGGCLATWQGERLTN

Sequences:

>Translated_210_residues
MRSDVVIVACAGRGPRIEHTGGIAVRRTGSDTVYLVSAAATPLGGDVINVRVVVEPGARLVVRSAAATVTLPSAATPESQ
TCWDIESAGALDIDPQPTVVAGASRHLTTTRIRLTDAGSIRLRERVQIGRSGEREGFWSGALHADVDGAPLLRHRVELGT
GSVTDDALGRPLACVSELRYPEPSFASDGTVLALAAGGCLATWQGERLTN
>Mature_210_residues
MRSDVVIVACAGRGPRIEHTGGIAVRRTGSDTVYLVSAAATPLGGDVINVRVVVEPGARLVVRSAAATVTLPSAATPESQ
TCWDIESAGALDIDPQPTVVAGASRHLTTTRIRLTDAGSIRLRERVQIGRSGEREGFWSGALHADVDGAPLLRHRVELGT
GSVTDDALGRPLACVSELRYPEPSFASDGTVLALAAGGCLATWQGERLTN

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 21887; Mature: 21887

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSDVVIVACAGRGPRIEHTGGIAVRRTGSDTVYLVSAAATPLGGDVINVRVVVEPGARL
CCCCEEEEEECCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCEE
VVRSAAATVTLPSAATPESQTCWDIESAGALDIDPQPTVVAGASRHLTTTRIRLTDAGSI
EEEECEEEEEECCCCCCCCCCEEECCCCCEECCCCCCCEEECCCCCEEEEEEEEECCCCE
RLRERVQIGRSGEREGFWSGALHADVDGAPLLRHRVELGTGSVTDDALGRPLACVSELRY
EEEEEECCCCCCCCCCCCCCCEECCCCCCHHHHEEEECCCCCCCHHHCCCCHHHHHHHCC
PEPSFASDGTVLALAAGGCLATWQGERLTN
CCCCCCCCCCEEEEECCCEEEEECCCCCCC
>Mature Secondary Structure
MRSDVVIVACAGRGPRIEHTGGIAVRRTGSDTVYLVSAAATPLGGDVINVRVVVEPGARL
CCCCEEEEEECCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCEE
VVRSAAATVTLPSAATPESQTCWDIESAGALDIDPQPTVVAGASRHLTTTRIRLTDAGSI
EEEECEEEEEECCCCCCCCCCEEECCCCCEECCCCCCCEEECCCCCEEEEEEEEECCCCE
RLRERVQIGRSGEREGFWSGALHADVDGAPLLRHRVELGTGSVTDDALGRPLACVSELRY
EEEEEECCCCCCCCCCCCCCCEECCCCCCHHHHEEEECCCCCCCHHHCCCCHHHHHHHCC
PEPSFASDGTVLALAAGGCLATWQGERLTN
CCCCCCCCCCEEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA