Click here to switch to the map view.

The map label for this gene is apa [H]

Identifier: 108799762

GI number: 108799762

Start: 2943193

End: 2944194

Strand: Reverse

Name: apa [H]

Synonym: Mmcs_2796

Alternate gene names: 108799762

Gene position: 2944194-2943193 (Counterclockwise)

Preceding gene: 108799763

Following gene: 108799758

Centisome position: 51.6

GC content: 74.55

Gene sequence:

>1002_bases
ATGGATGAGCCGGACGTGATGTCGACGCGACGCAGGGGCCTGTCGAAGACGCTGGCGATCGCTGCGGTGGCAGGCGCCAC
CGCAGCGGCCCTGGCGATGCCCTCGGTGGCCGGTGCGCAACCCACACCCCCTCCGCCGCCCCCCGCACCCTCACCGGCGG
CGCCGGCGCCGCCGCCACCCGGTCCCGGGCCCGTCCCGCCGCCACCGCCTGCGGACCCGAATGCGGCACCGCCGCCCGCG
GGCCAGCTTCCTCCGCCGCCCCCGGCGGATCCGAATGCACCGCCGCCGGCAGATCCGAACGCCCCGCCGCCGCCCGCGCC
GGAACCGGGCCGTGTCGACAATGCCGCGGGCGGGTTCAGCTACGTGGTGCCCGGCGGGTGGAAGGTCTCCGACGCGACGA
ACCTGTCCTACGGGCAGGCGCTGCTGACCAGGATTCCGCCGGAGGGTGTCACCAACCCGCCGAACGACACCAGCGTGCTG
CTCGGCCGCCTCGACCTCAAGCTGTTCGCGGGCGCCGAGACCGACAACACCAAGGCGGCCAACCGCCTGGCCTCGGACAT
GGGTGAGTTCTTCATGCCGTTCCCGGGGACCCGGGTCAACCAGTCGACGACTCCGCTCGACGCCAACGGTATGCCGGGCG
TCGCGTCGTACTACGAGGTGAAGTTCACCGATACGAACAAGCCGAACGGCCAGATCTGGGCCGGTGTGGTCGGCAATCCG
GTCGCGCCGGGCACCCCGCGTGGCCAGCGCACGCCGGAACGGTGGTTCGTGGTGTGGCTGGGGTCGGCCACCAACCCCGT
CGACCGGGAGGCCGCGGTCACGCTCGCCAACTCGATCCGGCCGTGGGCGCCGCCGCCCCCACCGCCGCCGCCGGCGCCGG
GCGATCCGAACGTGCCGCCTCCGCCCGCGGATCCGAACGCGCCGCCGCCGCGGCCCGAGGTGGGTGTCGCGGTTCCCGTC
GCGCCGGAGAACGTACCGCCGGAGATGCGGCCGCAGGGCTGA

Upstream 100 bases:

>100_bases
CTTTGATCTGCGCGCTCAGGCAGACAGCAATCACCGTTTTACTCACATTCACAGCAATTCACACTTGCGTCACGGCGGTA
ACACGGTAGTTTCTTTCACC

Downstream 100 bases:

>100_bases
TTCCGAGGACGGTCCACATGCCTCGCGCCGATGCGCACGCAAGCCATCGGCGCGGGGCAATGCGGCACCCCGCGATTGCG
GTGCACCGTTGTCAGATTCC

Product: fibronectin-attachment

Products: NA

Alternate protein names: Antigen 43L; FAP-L; Fibronectin attachment protein [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDEPDVMSTRRRGLSKTLAIAAVAGATAAALAMPSVAGAQPTPPPPPPAPSPAAPAPPPPGPGPVPPPPPADPNAAPPPA
GQLPPPPPADPNAPPPADPNAPPPPAPEPGRVDNAAGGFSYVVPGGWKVSDATNLSYGQALLTRIPPEGVTNPPNDTSVL
LGRLDLKLFAGAETDNTKAANRLASDMGEFFMPFPGTRVNQSTTPLDANGMPGVASYYEVKFTDTNKPNGQIWAGVVGNP
VAPGTPRGQRTPERWFVVWLGSATNPVDREAAVTLANSIRPWAPPPPPPPPAPGDPNVPPPPADPNAPPPRPEVGVAVPV
APENVPPEMRPQG

Sequences:

>Translated_333_residues
MDEPDVMSTRRRGLSKTLAIAAVAGATAAALAMPSVAGAQPTPPPPPPAPSPAAPAPPPPGPGPVPPPPPADPNAAPPPA
GQLPPPPPADPNAPPPADPNAPPPPAPEPGRVDNAAGGFSYVVPGGWKVSDATNLSYGQALLTRIPPEGVTNPPNDTSVL
LGRLDLKLFAGAETDNTKAANRLASDMGEFFMPFPGTRVNQSTTPLDANGMPGVASYYEVKFTDTNKPNGQIWAGVVGNP
VAPGTPRGQRTPERWFVVWLGSATNPVDREAAVTLANSIRPWAPPPPPPPPAPGDPNVPPPPADPNAPPPRPEVGVAVPV
APENVPPEMRPQG
>Mature_333_residues
MDEPDVMSTRRRGLSKTLAIAAVAGATAAALAMPSVAGAQPTPPPPPPAPSPAAPAPPPPGPGPVPPPPPADPNAAPPPA
GQLPPPPPADPNAPPPADPNAPPPPAPEPGRVDNAAGGFSYVVPGGWKVSDATNLSYGQALLTRIPPEGVTNPPNDTSVL
LGRLDLKLFAGAETDNTKAANRLASDMGEFFMPFPGTRVNQSTTPLDANGMPGVASYYEVKFTDTNKPNGQIWAGVVGNP
VAPGTPRGQRTPERWFVVWLGSATNPVDREAAVTLANSIRPWAPPPPPPPPAPGDPNVPPPPADPNAPPPRPEVGVAVPV
APENVPPEMRPQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the apa family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010801 [H]

Pfam domain/function: PF07174 FAP [H]

EC number: NA

Molecular weight: Translated: 33881; Mature: 33881

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEPDVMSTRRRGLSKTLAIAAVAGATAAALAMPSVAGAQPTPPPPPPAPSPAAPAPPPP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCC
GPGPVPPPPPADPNAAPPPAGQLPPPPPADPNAPPPADPNAPPPPAPEPGRVDNAAGGFS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
YVVPGGWKVSDATNLSYGQALLTRIPPEGVTNPPNDTSVLLGRLDLKLFAGAETDNTKAA
EECCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHH
NRLASDMGEFFMPFPGTRVNQSTTPLDANGMPGVASYYEVKFTDTNKPNGQIWAGVVGNP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCC
VAPGTPRGQRTPERWFVVWLGSATNPVDREAAVTLANSIRPWAPPPPPPPPAPGDPNVPP
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PPADPNAPPPRPEVGVAVPVAPENVPPEMRPQG
CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDEPDVMSTRRRGLSKTLAIAAVAGATAAALAMPSVAGAQPTPPPPPPAPSPAAPAPPPP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCC
GPGPVPPPPPADPNAAPPPAGQLPPPPPADPNAPPPADPNAPPPPAPEPGRVDNAAGGFS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
YVVPGGWKVSDATNLSYGQALLTRIPPEGVTNPPNDTSVLLGRLDLKLFAGAETDNTKAA
EECCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHH
NRLASDMGEFFMPFPGTRVNQSTTPLDANGMPGVASYYEVKFTDTNKPNGQIWAGVVGNP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCC
VAPGTPRGQRTPERWFVVWLGSATNPVDREAAVTLANSIRPWAPPPPPPPPAPGDPNVPP
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PPADPNAPPPRPEVGVAVPVAPENVPPEMRPQG
CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8262636; 7790081; 11234002 [H]