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The map label for this gene is xylB [H]

Identifier: 108799754

GI number: 108799754

Start: 2933875

End: 2935356

Strand: Reverse

Name: xylB [H]

Synonym: Mmcs_2788

Alternate gene names: 108799754

Gene position: 2935356-2933875 (Counterclockwise)

Preceding gene: 108799755

Following gene: 108799753

Centisome position: 51.45

GC content: 72.13

Gene sequence:

>1482_bases
ATGACCGCCGTCCTGGGCGTCGACTCGTCGACGCAGTCGTGCAAGGTGGAGATCCGCGATCTGACCACCGGAGAGCTCCT
GGGGTGCGGTTCGGCCCCGCACCCGCCGGCGTTCCCGCCGTGCAGCGAACAGCATCCGCTCGACTGGGTGTCGGCGTTCG
TCGCCGCAACCCGGACCGCTCTCGCCGACTGCGCCCGCCCACCCGCCGTATGCGCGATCTCCGTCGCCGCGCAGTGCCAC
GGCCTGGTACTGCTCGACGATCACGGCAATCCCCTGCGCGCGGCCAAGTTGTGGAACGACACCACCGGCGCCCCCGCACT
GCGCGCGCTGGCCGACCGCATCGGTGTCCCGTCCTGGATCCGCCGGACCGGGTCCGCGCCGACCGCCGCGTTCACCATCG
CCAAACTCGCGTGGGTCGCCGAACACGAACCCGAGGTGCTCGACCGGGCGTCGACGATCCTGCTCCCGCACGACTACCTG
ACCTACTGGCTGACGGGGCGGCCGGTCACCGACCGCTCCGAGGCGTCGGGCACCGGGTACTTCGATGTCGGAACCGGACA
GTGGATCACCGAATACCTCGATTTGGCAGGTGGTGCCCGCGACTGGCCGTCGATGCTGCCGACGGTGCTCGCCCCGTGTG
AGCCTGCCGGGGCGCTGCGACCGGCCGCGGCGGAGATCCTCGGTCTCGACGGTGACGTGGTCGTCGCACCCGGCGGCGGT
GACCAGCACGCGGCCTACCTCGGTCTCGGTCTGCGCGACGGTGACCAGTACATCGGCATCGGCACGTCCGGTGTGGTCGC
AACCTCCTCGCGCACACCGGTTTTCGACCCGCAAGGCATGGTCGACGGGGTCGCGGACCTGACCGGGGGCTACCTGCCGC
TGGTGAGCACGCTCAACGCGGCGCGGGTGTCCGATGTCGCCGCCCGACTCCTGGGCACCGATCTGGTCGACCTGGCCGAC
CTGGCGCTCAGTGCCGGGGAGACGCAGGGGCCCGTGCTGGTGCCGTTCCTCGACGGTGAGCGCAAACCCGACCGGCCCGA
CGCCCGCGGCGCGTTCGCCGACCTCACTTCCCGCACCACCCGCGCAGAACTGGCGCGAGCATTCGTGGAGGGGCCACTTC
TGTCGCTGATGAGCGCACGCGACAGCCTGCGCGCATGTGGCGTCGACGTCAGCGGCGCCGCCACCGCGGTCGGCGGCGGC
GCCCGCTCACCGGCCACGCTGCAGTTGCTCGCCGATCTGCTCGACGGCGAGGTCACCGTGCTCGACACCGATGAGGCGAC
CGCGCGCGGGGCCTGTGTGCAGGCCGCCGCCGTCGCCACCGGACGCGACGTCGCCGGGCTGGTCGACCTGGCCAAACAAT
GGCAACCCGCGGTGCGGCATCGGGTTTCGCCGCGACACACCGGACGCGACCTGGGCGCCCTGCGGGCGCGGTGGGCGCAG
CTCTCGGCGTCGCCCCTGCTGGAGAACGGAATTCGGCCGTGA

Upstream 100 bases:

>100_bases
GAGGGCACACCCTGCACGACGTCGTGCACAGCCACCCCGCGGGCGGAGTCGGCGCGCGCGGGCATCGCCCGGGTGACGAA
TCGGCACCGGTGGTGCGGAC

Downstream 100 bases:

>100_bases
ACGCCGCCGCGCTGCTGGCACCGTGGCACCGGGAGTTCCCCGGCCGCCTCGCCGGATCCGTGTACGCGGCGCCGCCTGCC
GCGCGCGCTTCGGCGGCCAG

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTAVLGVDSSTQSCKVEIRDLTTGELLGCGSAPHPPAFPPCSEQHPLDWVSAFVAATRTALADCARPPAVCAISVAAQCH
GLVLLDDHGNPLRAAKLWNDTTGAPALRALADRIGVPSWIRRTGSAPTAAFTIAKLAWVAEHEPEVLDRASTILLPHDYL
TYWLTGRPVTDRSEASGTGYFDVGTGQWITEYLDLAGGARDWPSMLPTVLAPCEPAGALRPAAAEILGLDGDVVVAPGGG
DQHAAYLGLGLRDGDQYIGIGTSGVVATSSRTPVFDPQGMVDGVADLTGGYLPLVSTLNAARVSDVAARLLGTDLVDLAD
LALSAGETQGPVLVPFLDGERKPDRPDARGAFADLTSRTTRAELARAFVEGPLLSLMSARDSLRACGVDVSGAATAVGGG
ARSPATLQLLADLLDGEVTVLDTDEATARGACVQAAAVATGRDVAGLVDLAKQWQPAVRHRVSPRHTGRDLGALRARWAQ
LSASPLLENGIRP

Sequences:

>Translated_493_residues
MTAVLGVDSSTQSCKVEIRDLTTGELLGCGSAPHPPAFPPCSEQHPLDWVSAFVAATRTALADCARPPAVCAISVAAQCH
GLVLLDDHGNPLRAAKLWNDTTGAPALRALADRIGVPSWIRRTGSAPTAAFTIAKLAWVAEHEPEVLDRASTILLPHDYL
TYWLTGRPVTDRSEASGTGYFDVGTGQWITEYLDLAGGARDWPSMLPTVLAPCEPAGALRPAAAEILGLDGDVVVAPGGG
DQHAAYLGLGLRDGDQYIGIGTSGVVATSSRTPVFDPQGMVDGVADLTGGYLPLVSTLNAARVSDVAARLLGTDLVDLAD
LALSAGETQGPVLVPFLDGERKPDRPDARGAFADLTSRTTRAELARAFVEGPLLSLMSARDSLRACGVDVSGAATAVGGG
ARSPATLQLLADLLDGEVTVLDTDEATARGACVQAAAVATGRDVAGLVDLAKQWQPAVRHRVSPRHTGRDLGALRARWAQ
LSASPLLENGIRP
>Mature_492_residues
TAVLGVDSSTQSCKVEIRDLTTGELLGCGSAPHPPAFPPCSEQHPLDWVSAFVAATRTALADCARPPAVCAISVAAQCHG
LVLLDDHGNPLRAAKLWNDTTGAPALRALADRIGVPSWIRRTGSAPTAAFTIAKLAWVAEHEPEVLDRASTILLPHDYLT
YWLTGRPVTDRSEASGTGYFDVGTGQWITEYLDLAGGARDWPSMLPTVLAPCEPAGALRPAAAEILGLDGDVVVAPGGGD
QHAAYLGLGLRDGDQYIGIGTSGVVATSSRTPVFDPQGMVDGVADLTGGYLPLVSTLNAARVSDVAARLLGTDLVDLADL
ALSAGETQGPVLVPFLDGERKPDRPDARGAFADLTSRTTRAELARAFVEGPLLSLMSARDSLRACGVDVSGAATAVGGGA
RSPATLQLLADLLDGEVTVLDTDEATARGACVQAAAVATGRDVAGLVDLAKQWQPAVRHRVSPRHTGRDLGALRARWAQL
SASPLLENGIRP

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI4504007, Length=462, Percent_Identity=24.8917748917749, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI189409120, Length=462, Percent_Identity=24.8917748917749, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI42794763, Length=462, Percent_Identity=24.6753246753247, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI41393575, Length=453, Percent_Identity=25.60706401766, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI1789987, Length=420, Percent_Identity=35.9523809523809, Blast_Score=166, Evalue=5e-42,
Organism=Escherichia coli, GI1787789, Length=474, Percent_Identity=27.8481012658228, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1790005, Length=387, Percent_Identity=25.3229974160207, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789168, Length=390, Percent_Identity=25.1282051282051, Blast_Score=79, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 51177; Mature: 51046

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVLGVDSSTQSCKVEIRDLTTGELLGCGSAPHPPAFPPCSEQHPLDWVSAFVAATRTA
CCEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LADCARPPAVCAISVAAQCHGLVLLDDHGNPLRAAKLWNDTTGAPALRALADRIGVPSWI
HHHHCCCCHHHHEEEHHHHCCEEEECCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCHHH
RRTGSAPTAAFTIAKLAWVAEHEPEVLDRASTILLPHDYLTYWLTGRPVTDRSEASGTGY
HHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCEEEECCHHEEEEECCCCCCCCCCCCCCCE
FDVGTGQWITEYLDLAGGARDWPSMLPTVLAPCEPAGALRPAAAEILGLDGDVVVAPGGG
EECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEECCCC
DQHAAYLGLGLRDGDQYIGIGTSGVVATSSRTPVFDPQGMVDGVADLTGGYLPLVSTLNA
CCCEEEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
ARVSDVAARLLGTDLVDLADLALSAGETQGPVLVPFLDGERKPDRPDARGAFADLTSRTT
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
RAELARAFVEGPLLSLMSARDSLRACGVDVSGAATAVGGGARSPATLQLLADLLDGEVTV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCEEE
LDTDEATARGACVQAAAVATGRDVAGLVDLAKQWQPAVRHRVSPRHTGRDLGALRARWAQ
EECCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LSASPLLENGIRP
HCCCHHHHCCCCC
>Mature Secondary Structure 
TAVLGVDSSTQSCKVEIRDLTTGELLGCGSAPHPPAFPPCSEQHPLDWVSAFVAATRTA
CEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LADCARPPAVCAISVAAQCHGLVLLDDHGNPLRAAKLWNDTTGAPALRALADRIGVPSWI
HHHHCCCCHHHHEEEHHHHCCEEEECCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCHHH
RRTGSAPTAAFTIAKLAWVAEHEPEVLDRASTILLPHDYLTYWLTGRPVTDRSEASGTGY
HHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCEEEECCHHEEEEECCCCCCCCCCCCCCCE
FDVGTGQWITEYLDLAGGARDWPSMLPTVLAPCEPAGALRPAAAEILGLDGDVVVAPGGG
EECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEECCCC
DQHAAYLGLGLRDGDQYIGIGTSGVVATSSRTPVFDPQGMVDGVADLTGGYLPLVSTLNA
CCCEEEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
ARVSDVAARLLGTDLVDLADLALSAGETQGPVLVPFLDGERKPDRPDARGAFADLTSRTT
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
RAELARAFVEGPLLSLMSARDSLRACGVDVSGAATAVGGGARSPATLQLLADLLDGEVTV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCEEE
LDTDEATARGACVQAAAVATGRDVAGLVDLAKQWQPAVRHRVSPRHTGRDLGALRARWAQ
EECCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LSASPLLENGIRP
HCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]