Click here to switch to the map view.

The map label for this gene is mocB [H]

Identifier: 108799746

GI number: 108799746

Start: 2925644

End: 2926699

Strand: Reverse

Name: mocB [H]

Synonym: Mmcs_2780

Alternate gene names: 108799746

Gene position: 2926699-2925644 (Counterclockwise)

Preceding gene: 108799747

Following gene: 108799738

Centisome position: 51.3

GC content: 65.81

Gene sequence:

>1056_bases
ATGACACTGACAACGAAGTTCGGTGCGATCGCCGCCGCCGGGGTGCTGGGCCTCGGGCTGACGGCCTGCGGCGCCGGTGA
CACCGAAGCCAACAGCGACACCACCCGCATCGGCGTCACGGTGTACGACATGAGCTCGTTCATCACCGAGGGCAAAGAGG
GGATGGACACCTACGCCAAGGCCAAGAACATCGAACTGGTGTGGAACTCGGCCAACAACGACGTCTCCACCCAGGCCAGC
CAGGTCGACTCGCTGATCAACCAGGGGGTCGACGCGATCATCGTCGTTCCCGTGCAGGCGGATTCGCTCGGACCCCAGGT
CGCCTCGGCCAAGGAGAAGGGCATCCCGCTGCTGGCGGTCAACGCCGCGCTGGAGACGCCGGATCTGGCGGGCAACGTCC
AGCCCGACGATGTGGCCGCCGGTGAGCAGGAGATGCAGATGATGGCCGACCGCCTCGGCGGCCGCGGCAACATCGTCGTC
CTGCAGGGTCCGCTGGGCGGGTCCGGTGAGATCAACCGCGGTAAGGGCATCGACAACGTGCTCGCCAAGTACCCCGACAT
CAAGGTGCTGGCCAAGGACACCGCGAACTGGAAGCGCGACGAGGCCGTCAACAAGATGAAGAACTGGATCTCGAGCTTCG
GCCCGCAGATCAACGGCGTGGTGGCCCAGAACGACGATATGGGCCTCGGTGCCCTGCAGGCGCTCAAGGAGGCCGGCCGC
ACCGACGTCCCGATCGTCGGCATCGACGGAATCGAGGACGGCCTCAACGCCGTGAAGAGCGGTGAATTCATCGGCACCTC
ACTGCAGAACGGCACCGTCGAACTGTCCGCCGGCCTGGCCGTCGCCGACGCCCTGGTCAAGGGTGAGGACGTCAAGACCG
ATCCGGTCTACGTCATGCCCGCGATCACCAAGGACAACGTCGACGTCGCGATCCAGCACGTGGTGACCGAACGCGGCAAG
TTCCTCGAGGGGCTGGTCGAGTTGACCGAGAAGAACCTCGAGACCGGCGACATCGCCTACGAGGGCATCCCGGGCCAGGA
GCAGCCGCAGCCCTGA

Upstream 100 bases:

>100_bases
TCGAGACCGGTGACATCGCCTACGAGGGCATCCCCGGTCAGAAGCAACCGTGATCGCCGAATCCAGTGGTTCCAACCGAA
AGAGAGCGAGACAACAACAG

Downstream 100 bases:

>100_bases
CCCCGTTCGCCGAATGTGAAGCTGTTGCGAATTATCGGCCGATTCTTCGCAGTGGTTTCACATTCGGCGCTTCAGGGCGC
TACCGCGTGGTCGTCGTCGG

Product: periplasmic binding protein/LacI transcriptional regulator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTLTTKFGAIAAAGVLGLGLTACGAGDTEANSDTTRIGVTVYDMSSFITEGKEGMDTYAKAKNIELVWNSANNDVSTQAS
QVDSLINQGVDAIIVVPVQADSLGPQVASAKEKGIPLLAVNAALETPDLAGNVQPDDVAAGEQEMQMMADRLGGRGNIVV
LQGPLGGSGEINRGKGIDNVLAKYPDIKVLAKDTANWKRDEAVNKMKNWISSFGPQINGVVAQNDDMGLGALQALKEAGR
TDVPIVGIDGIEDGLNAVKSGEFIGTSLQNGTVELSAGLAVADALVKGEDVKTDPVYVMPAITKDNVDVAIQHVVTERGK
FLEGLVELTEKNLETGDIAYEGIPGQEQPQP

Sequences:

>Translated_351_residues
MTLTTKFGAIAAAGVLGLGLTACGAGDTEANSDTTRIGVTVYDMSSFITEGKEGMDTYAKAKNIELVWNSANNDVSTQAS
QVDSLINQGVDAIIVVPVQADSLGPQVASAKEKGIPLLAVNAALETPDLAGNVQPDDVAAGEQEMQMMADRLGGRGNIVV
LQGPLGGSGEINRGKGIDNVLAKYPDIKVLAKDTANWKRDEAVNKMKNWISSFGPQINGVVAQNDDMGLGALQALKEAGR
TDVPIVGIDGIEDGLNAVKSGEFIGTSLQNGTVELSAGLAVADALVKGEDVKTDPVYVMPAITKDNVDVAIQHVVTERGK
FLEGLVELTEKNLETGDIAYEGIPGQEQPQP
>Mature_350_residues
TLTTKFGAIAAAGVLGLGLTACGAGDTEANSDTTRIGVTVYDMSSFITEGKEGMDTYAKAKNIELVWNSANNDVSTQASQ
VDSLINQGVDAIIVVPVQADSLGPQVASAKEKGIPLLAVNAALETPDLAGNVQPDDVAAGEQEMQMMADRLGGRGNIVVL
QGPLGGSGEINRGKGIDNVLAKYPDIKVLAKDTANWKRDEAVNKMKNWISSFGPQINGVVAQNDDMGLGALQALKEAGRT
DVPIVGIDGIEDGLNAVKSGEFIGTSLQNGTVELSAGLAVADALVKGEDVKTDPVYVMPAITKDNVDVAIQHVVTERGKF
LEGLVELTEKNLETGDIAYEGIPGQEQPQP

Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism. Could be involved in its high affinity transport [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=246, Percent_Identity=30.0813008130081, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1788473, Length=281, Percent_Identity=29.5373665480427, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1790674, Length=229, Percent_Identity=32.3144104803493, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1790526, Length=236, Percent_Identity=29.2372881355932, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789990, Length=274, Percent_Identity=27.3722627737226, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36572; Mature: 36440

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTTKFGAIAAAGVLGLGLTACGAGDTEANSDTTRIGVTVYDMSSFITEGKEGMDTYAK
CCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHHHHCCCCHHHHHHH
AKNIELVWNSANNDVSTQASQVDSLINQGVDAIIVVPVQADSLGPQVASAKEKGIPLLAV
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEE
NAALETPDLAGNVQPDDVAAGEQEMQMMADRLGGRGNIVVLQGPLGGSGEINRGKGIDNV
ECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHH
LAKYPDIKVLAKDTANWKRDEAVNKMKNWISSFGPQINGVVAQNDDMGLGALQALKEAGR
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCC
TDVPIVGIDGIEDGLNAVKSGEFIGTSLQNGTVELSAGLAVADALVKGEDVKTDPVYVMP
CCCCEEECCCCHHHHHHHHCCCEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEE
AITKDNVDVAIQHVVTERGKFLEGLVELTEKNLETGDIAYEGIPGQEQPQP
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
TLTTKFGAIAAAGVLGLGLTACGAGDTEANSDTTRIGVTVYDMSSFITEGKEGMDTYAK
CEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHHHHCCCCHHHHHHH
AKNIELVWNSANNDVSTQASQVDSLINQGVDAIIVVPVQADSLGPQVASAKEKGIPLLAV
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEE
NAALETPDLAGNVQPDDVAAGEQEMQMMADRLGGRGNIVVLQGPLGGSGEINRGKGIDNV
ECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHH
LAKYPDIKVLAKDTANWKRDEAVNKMKNWISSFGPQINGVVAQNDDMGLGALQALKEAGR
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCC
TDVPIVGIDGIEDGLNAVKSGEFIGTSLQNGTVELSAGLAVADALVKGEDVKTDPVYVMP
CCCCEEECCCCHHHHHHHHCCCEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEE
AITKDNVDVAIQHVVTERGKFLEGLVELTEKNLETGDIAYEGIPGQEQPQP
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]