Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

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The map label for this gene is 108799695

Identifier: 108799695

GI number: 108799695

Start: 2876442

End: 2877284

Strand: Reverse

Name: 108799695

Synonym: Mmcs_2729

Alternate gene names: NA

Gene position: 2877284-2876442 (Counterclockwise)

Preceding gene: 108799696

Following gene: 108799690

Centisome position: 50.43

GC content: 67.26

Gene sequence:

>843_bases
GTGGGGACAAGCCGTAACAGGAAAGGCGCCGTCGAGGCGCGAGGGCGCCGTCGATCGGGAGGGCCGATCCGTCGTCCCAC
CTACACTGGCCACATGCTGCGCATGTTCACGCGATCGGTGCTGGTGATCGCCGGTTCCGTCGCGATCGCGATGACCGGTT
CCGTCGCGACGGGTTCCGCGGCGATCAGCACGCCGCCCGCCGTCACGTCGATCGCACCCGGGACAGGCGACGTCGTCGGG
GTGGCGATGCCGCTGACCGTGCGGTTCGCCGCGCCGGTCGACAACCGGTTCGCCGCGCAGCGGTCGTTGCGGATCACCTC
ACCGAACACGCCCGACGGCGAGTTCACCTGGCTCAGCGATTCGGTGATGCAGTGGACGCCGACGGGTTTCTGGCCTGCGC
ATTCACCGATCTCGGTGGGTGCGGGTGACTTCATGACGGAGTTCCGCACCGGCGCGTCCGTCGTCAGCGTCGCCGATATC
GACGCGTACACCTTCACCGTCAGCATCGACGACGAGGTGGTGCGGGAGATGCCGGCGTCCATGGGCAAGGCCAAGTTCCC
GACACCGCAGGGTACGTTCCGCGTCCTGGGCAAGGAATCCGTCGTCGTGATGGATTCGCGGACCATCGGCATCCCGCTCG
ACGACCCCGAGGGCTACAAACTCACCGTGTACGACGCGGTCCGCATCACCTGGGGCGGGGTCTACGTCCACGGGGCTCCG
TGGTCGACCGGCTCGCAGGGCTACGCCAACGTCAGCCACGGCTGCATCAACCTCAGCCCGGACAACGCCGACTGGTATTT
CAACACCGTCGGAATGGGCGATCCGGTCATCGTCCAGGCGTAG

Upstream 100 bases:

>100_bases
GGTGCTGGGATACGTCCTGATGGCCTTCGGACGCACCCGGCGGCGCGTGGACCCGATGCGGGGGTGAAACACCCGGGCGT
GCGCCGGCGATGTCCATGAC

Downstream 100 bases:

>100_bases
CGTGCAGGTTCTTCGCGGTCGGTGAGGTGGCGACCGCGGCGGGATCGGGACAGGTGCCGAGCACCCGGTCGGCGGTGCCG
GCGCTGGTCACCGTGAACCA

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MGTSRNRKGAVEARGRRRSGGPIRRPTYTGHMLRMFTRSVLVIAGSVAIAMTGSVATGSAAISTPPAVTSIAPGTGDVVG
VAMPLTVRFAAPVDNRFAAQRSLRITSPNTPDGEFTWLSDSVMQWTPTGFWPAHSPISVGAGDFMTEFRTGASVVSVADI
DAYTFTVSIDDEVVREMPASMGKAKFPTPQGTFRVLGKESVVVMDSRTIGIPLDDPEGYKLTVYDAVRITWGGVYVHGAP
WSTGSQGYANVSHGCINLSPDNADWYFNTVGMGDPVIVQA

Sequences:

>Translated_280_residues
MGTSRNRKGAVEARGRRRSGGPIRRPTYTGHMLRMFTRSVLVIAGSVAIAMTGSVATGSAAISTPPAVTSIAPGTGDVVG
VAMPLTVRFAAPVDNRFAAQRSLRITSPNTPDGEFTWLSDSVMQWTPTGFWPAHSPISVGAGDFMTEFRTGASVVSVADI
DAYTFTVSIDDEVVREMPASMGKAKFPTPQGTFRVLGKESVVVMDSRTIGIPLDDPEGYKLTVYDAVRITWGGVYVHGAP
WSTGSQGYANVSHGCINLSPDNADWYFNTVGMGDPVIVQA
>Mature_279_residues
GTSRNRKGAVEARGRRRSGGPIRRPTYTGHMLRMFTRSVLVIAGSVAIAMTGSVATGSAAISTPPAVTSIAPGTGDVVGV
AMPLTVRFAAPVDNRFAAQRSLRITSPNTPDGEFTWLSDSVMQWTPTGFWPAHSPISVGAGDFMTEFRTGASVVSVADID
AYTFTVSIDDEVVREMPASMGKAKFPTPQGTFRVLGKESVVVMDSRTIGIPLDDPEGYKLTVYDAVRITWGGVYVHGAPW
STGSQGYANVSHGCINLSPDNADWYFNTVGMGDPVIVQA

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 29752; Mature: 29621

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTSRNRKGAVEARGRRRSGGPIRRPTYTGHMLRMFTRSVLVIAGSVAIAMTGSVATGSA
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECEEEEEEECCCCCCCE
AISTPPAVTSIAPGTGDVVGVAMPLTVRFAAPVDNRFAAQRSLRITSPNTPDGEFTWLSD
ECCCCCCCEEECCCCCCEEEEEEEEEEEEECCCCCCHHHHCEEEEECCCCCCCCEEEECC
SVMQWTPTGFWPAHSPISVGAGDFMTEFRTGASVVSVADIDAYTFTVSIDDEVVREMPAS
CEEEECCCCCCCCCCCCEECCCHHHHHHHCCCCEEEEEECCEEEEEEEECHHHHHHHHHH
MGKAKFPTPQGTFRVLGKESVVVMDSRTIGIPLDDPEGYKLTVYDAVRITWGGVYVHGAP
CCCCCCCCCCCEEEEECCCEEEEEECCEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCC
WSTGSQGYANVSHGCINLSPDNADWYFNTVGMGDPVIVQA
CCCCCCCCEECCCCEEEECCCCCCEEEEECCCCCEEEEEC
>Mature Secondary Structure 
GTSRNRKGAVEARGRRRSGGPIRRPTYTGHMLRMFTRSVLVIAGSVAIAMTGSVATGSA
CCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECEEEEEEECCCCCCCE
AISTPPAVTSIAPGTGDVVGVAMPLTVRFAAPVDNRFAAQRSLRITSPNTPDGEFTWLSD
ECCCCCCCEEECCCCCCEEEEEEEEEEEEECCCCCCHHHHCEEEEECCCCCCCCEEEECC
SVMQWTPTGFWPAHSPISVGAGDFMTEFRTGASVVSVADIDAYTFTVSIDDEVVREMPAS
CEEEECCCCCCCCCCCCEECCCHHHHHHHCCCCEEEEEECCEEEEEEEECHHHHHHHHHH
MGKAKFPTPQGTFRVLGKESVVVMDSRTIGIPLDDPEGYKLTVYDAVRITWGGVYVHGAP
CCCCCCCCCCCEEEEECCCEEEEEECCEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCC
WSTGSQGYANVSHGCINLSPDNADWYFNTVGMGDPVIVQA
CCCCCCCCEECCCCEEEECCCCCCEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]