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The map label for this gene is yfmJ [H]

Identifier: 108799640

GI number: 108799640

Start: 2824953

End: 2825972

Strand: Reverse

Name: yfmJ [H]

Synonym: Mmcs_2673

Alternate gene names: 108799640

Gene position: 2825972-2824953 (Counterclockwise)

Preceding gene: 108799642

Following gene: 108799639

Centisome position: 49.53

GC content: 68.33

Gene sequence:

>1020_bases
ATGAACCGCCAGATCGTGTTGCGTCGCCGCCCGGTCGGCCTGGTCGAGCCGTCAGACACCGAACTCGTCGAGTCACCGGC
GCCGGAGCCCGCCGACGGTGAAGCACTGTTGCGCACCACGTTCGTGGGCATCGACGCGGCAATCCGCACGTGGCTCAACG
ATCAGCGCGGCTACCTGCCCCCGGTGCAACTCGGTGAGGTGATCCGGGCGGCGGGGATCGGCGAGGTCGTGCGGTCGCGG
TGTGACGCCTTCGCCGTCGGGGATGTCGTGACGACCCTGACGGGATTCCAGGAGTACGCGATCATCCGCGACGATCTGTT
CAGCACGCCGATCGCGGGGCGGGAGAAGGTGGACCAGCGCGCGGTCATGTCGGTGTACGGGCCGACGGGCGCGACCGCCT
ACTTCGGTATGACCGACATCGGGCGGCCGCGGCCGGGGGAGACGGTCGTGGTGTCGGCGGCGGCCGGTGCGACCGGTTCG
GTGGCCGGGCAGATCGCGAAGATCGCCGGTGCTCGCGTGGTGGGGATCGCCGGCGGTCCGCAGAAGTGCCGAACTGTGGT
GGAGGACTTCGGATTTGACGCGTGCATCGACTACCGGTCGGCGGATCTGGCGGCGGCGCTCAAGGAGCACTGCCCCAAGG
GGGTCGACGTCTACTTCGACAACGTCGGCGGGGCCATTCTCGACGCGGTGCTCGGACGGCTCGCGCAGAACGCCCGGGTG
GTGCTGTGCGGGGTGATCTCCAGCTATCTCACCGGGGAACACCCCGGACCGGCCAACTACGTCAACCTGCTGTCGCGGAC
CGCGCTCATGCAGGGGTTCAACGCGCTCGACCAGTGGGGCCGTTTCGAGGAAGCGTTCGCCGCACTGCGCAGCTGGGATG
AGCAGGGTCTGCTGGTGCACCGCGAACACGTCTTCGAGGGCATCGGCTCGTGCGTCGATGCGCTCAACGGGCTGTTCGCC
GGGGTCAACATCGGCAAGATGCTTGTCAAGATCGGGGAGCCGACCGTCGAAACGGCCTGA

Upstream 100 bases:

>100_bases
CTTGGCGGTGTGCAGGGCGACCACGATCACTGCCGCGATTGTACGGAGTCCGGCCCGAAACCCGCTGGGGTGCCGTAGGT
TCGGGCAGGTGCCGGACCCG

Downstream 100 bases:

>100_bases
GCGGCGGAGGCTTTCGAGCGTTCGTTGAGGCGGCTGGCGTCGGCCACCGCATACCCCTGACCCGGCGGCTCACACGGGCG
TCCACCCACCGATCGATCAC

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNRQIVLRRRPVGLVEPSDTELVESPAPEPADGEALLRTTFVGIDAAIRTWLNDQRGYLPPVQLGEVIRAAGIGEVVRSR
CDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIAGREKVDQRAVMSVYGPTGATAYFGMTDIGRPRPGETVVVSAAAGATGS
VAGQIAKIAGARVVGIAGGPQKCRTVVEDFGFDACIDYRSADLAAALKEHCPKGVDVYFDNVGGAILDAVLGRLAQNARV
VLCGVISSYLTGEHPGPANYVNLLSRTALMQGFNALDQWGRFEEAFAALRSWDEQGLLVHREHVFEGIGSCVDALNGLFA
GVNIGKMLVKIGEPTVETA

Sequences:

>Translated_339_residues
MNRQIVLRRRPVGLVEPSDTELVESPAPEPADGEALLRTTFVGIDAAIRTWLNDQRGYLPPVQLGEVIRAAGIGEVVRSR
CDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIAGREKVDQRAVMSVYGPTGATAYFGMTDIGRPRPGETVVVSAAAGATGS
VAGQIAKIAGARVVGIAGGPQKCRTVVEDFGFDACIDYRSADLAAALKEHCPKGVDVYFDNVGGAILDAVLGRLAQNARV
VLCGVISSYLTGEHPGPANYVNLLSRTALMQGFNALDQWGRFEEAFAALRSWDEQGLLVHREHVFEGIGSCVDALNGLFA
GVNIGKMLVKIGEPTVETA
>Mature_339_residues
MNRQIVLRRRPVGLVEPSDTELVESPAPEPADGEALLRTTFVGIDAAIRTWLNDQRGYLPPVQLGEVIRAAGIGEVVRSR
CDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIAGREKVDQRAVMSVYGPTGATAYFGMTDIGRPRPGETVVVSAAAGATGS
VAGQIAKIAGARVVGIAGGPQKCRTVVEDFGFDACIDYRSADLAAALKEHCPKGVDVYFDNVGGAILDAVLGRLAQNARV
VLCGVISSYLTGEHPGPANYVNLLSRTALMQGFNALDQWGRFEEAFAALRSWDEQGLLVHREHVFEGIGSCVDALNGLFA
GVNIGKMLVKIGEPTVETA

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=350, Percent_Identity=34.2857142857143, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI226246680, Length=350, Percent_Identity=34.2857142857143, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI22748929, Length=350, Percent_Identity=34.2857142857143, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI226059159, Length=333, Percent_Identity=31.2312312312312, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI226059133, Length=333, Percent_Identity=31.2312312312312, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI226056130, Length=250, Percent_Identity=33.6, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI28557745, Length=326, Percent_Identity=31.5950920245399, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI194239674, Length=226, Percent_Identity=26.9911504424779, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI13236495, Length=226, Percent_Identity=26.9911504424779, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI226510941, Length=337, Percent_Identity=37.6854599406528, Blast_Score=228, Evalue=4e-61,
Organism=Escherichia coli, GI1790485, Length=251, Percent_Identity=30.6772908366534, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI133901710, Length=351, Percent_Identity=32.1937321937322, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI133901712, Length=351, Percent_Identity=32.1937321937322, Blast_Score=163, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6323504, Length=366, Percent_Identity=31.6939890710383, Blast_Score=140, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35990; Mature: 35990

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQIVLRRRPVGLVEPSDTELVESPAPEPADGEALLRTTFVGIDAAIRTWLNDQRGYLP
CCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PVQLGEVIRAAGIGEVVRSRCDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIAGREKVDQR
HHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AVMSVYGPTGATAYFGMTDIGRPRPGETVVVSAAAGATGSVAGQIAKIAGARVVGIAGGP
HHHHHCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCH
QKCRTVVEDFGFDACIDYRSADLAAALKEHCPKGVDVYFDNVGGAILDAVLGRLAQNARV
HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCEE
VLCGVISSYLTGEHPGPANYVNLLSRTALMQGFNALDQWGRFEEAFAALRSWDEQGLLVH
EHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEH
REHVFEGIGSCVDALNGLFAGVNIGKMLVKIGEPTVETA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNRQIVLRRRPVGLVEPSDTELVESPAPEPADGEALLRTTFVGIDAAIRTWLNDQRGYLP
CCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PVQLGEVIRAAGIGEVVRSRCDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIAGREKVDQR
HHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AVMSVYGPTGATAYFGMTDIGRPRPGETVVVSAAAGATGSVAGQIAKIAGARVVGIAGGP
HHHHHCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCH
QKCRTVVEDFGFDACIDYRSADLAAALKEHCPKGVDVYFDNVGGAILDAVLGRLAQNARV
HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCEE
VLCGVISSYLTGEHPGPANYVNLLSRTALMQGFNALDQWGRFEEAFAALRSWDEQGLLVH
EHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEH
REHVFEGIGSCVDALNGLFAGVNIGKMLVKIGEPTVETA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]