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The map label for this gene is iap [H]

Identifier: 108799639

GI number: 108799639

Start: 2824105

End: 2824719

Strand: Reverse

Name: iap [H]

Synonym: Mmcs_2672

Alternate gene names: 108799639

Gene position: 2824719-2824105 (Counterclockwise)

Preceding gene: 108799640

Following gene: 108799637

Centisome position: 49.51

GC content: 72.2

Gene sequence:

>615_bases
ATGAGGCGCATCTACGCCGTCGTCATCTGTCTGGCGCTGTCGTTGGCGACAGCGGGCACCGCGAGTGCGGAGCTTTTCCC
GCTTCCGACCCGCAACCAACAGGCCGTCGACCTGGTGATCGCCCGCGCGCTCTCGCAGCGTGGCGTCGCCTTCGCCTACG
GCGGCGGCAACACGGCGGGTCCGACGCTCGGCAACCCCGGGGGCAGCAGCGCCCCCGCACCGGCGGCGCCGCCGCCTGGG
GCGATCCCGGTCGACGGCACCAACGGCGCCATCCCGATCGCGGGCCTCCCCGCTGCGGCGCCGGCCCTCGTGCTGCCCGA
GCCGCCCCGGCCGCAGGTCGTCGGATTCGACGCCTCGGGTCTGATGGTCTACGCGTTCGCCGGCGCCGGGCTCAAGATCC
CGCGGACCTCGGGTGACCAGTACCTCGTCGGGCGCAAGGTGCTGCCCTCCCAGGCGCTGCCCGGTGACCTGATCTTCTAC
GGCCCCAACGGCACACAGAGCGTCGCCATGTTCATCGGCGGCGGGCAGATGGTCGAGGCCACCGACCCCGTCGTGCAGGT
CTCCCCGGTCCGCACCAACAACATGGCGCCGTACCTGGTGCGCTACATCGACTGA

Upstream 100 bases:

>100_bases
GCGGGCCGTTCCAGATGGAAAGAGGCGTGTTACTGGAGGTACAAGTGATGCTGGTGGGAATTGCCCACCGCTCGGGTCGA
AGTCGAGAGGTGAATGTGAG

Downstream 100 bases:

>100_bases
GCGTCGACACCCGCCAGTTCTACCTCAGGGTCGTCCCACCGTGATCGGAACGACCACTGGGTAGAACTCGCGGGGCTCAG
ACGTAGACGGCCTTCAGCGG

Product: NLP/P60

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRRIYAVVICLALSLATAGTASAELFPLPTRNQQAVDLVIARALSQRGVAFAYGGGNTAGPTLGNPGGSSAPAPAAPPPG
AIPVDGTNGAIPIAGLPAAAPALVLPEPPRPQVVGFDASGLMVYAFAGAGLKIPRTSGDQYLVGRKVLPSQALPGDLIFY
GPNGTQSVAMFIGGGQMVEATDPVVQVSPVRTNNMAPYLVRYID

Sequences:

>Translated_204_residues
MRRIYAVVICLALSLATAGTASAELFPLPTRNQQAVDLVIARALSQRGVAFAYGGGNTAGPTLGNPGGSSAPAPAAPPPG
AIPVDGTNGAIPIAGLPAAAPALVLPEPPRPQVVGFDASGLMVYAFAGAGLKIPRTSGDQYLVGRKVLPSQALPGDLIFY
GPNGTQSVAMFIGGGQMVEATDPVVQVSPVRTNNMAPYLVRYID
>Mature_204_residues
MRRIYAVVICLALSLATAGTASAELFPLPTRNQQAVDLVIARALSQRGVAFAYGGGNTAGPTLGNPGGSSAPAPAAPPPG
AIPVDGTNGAIPIAGLPAAAPALVLPEPPRPQVVGFDASGLMVYAFAGAGLKIPRTSGDQYLVGRKVLPSQALPGDLIFY
GPNGTQSVAMFIGGGQMVEATDPVVQVSPVRTNNMAPYLVRYID

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 20660; Mature: 20660

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIYAVVICLALSLATAGTASAELFPLPTRNQQAVDLVIARALSQRGVAFAYGGGNTAG
CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC
PTLGNPGGSSAPAPAAPPPGAIPVDGTNGAIPIAGLPAAAPALVLPEPPRPQVVGFDASG
CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCEEECCCCCCCCEEEECCCC
LMVYAFAGAGLKIPRTSGDQYLVGRKVLPSQALPGDLIFYGPNGTQSVAMFIGGGQMVEA
EEEEEEECCCEEEECCCCCCEEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCEEEEC
TDPVVQVSPVRTNNMAPYLVRYID
CCCEEEEECCCCCCCCCEEEEECC
>Mature Secondary Structure
MRRIYAVVICLALSLATAGTASAELFPLPTRNQQAVDLVIARALSQRGVAFAYGGGNTAG
CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC
PTLGNPGGSSAPAPAAPPPGAIPVDGTNGAIPIAGLPAAAPALVLPEPPRPQVVGFDASG
CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCEEECCCCCCCCEEEECCCC
LMVYAFAGAGLKIPRTSGDQYLVGRKVLPSQALPGDLIFYGPNGTQSVAMFIGGGQMVEA
EEEEEEECCCEEEECCCCCCEEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCEEEEC
TDPVVQVSPVRTNNMAPYLVRYID
CCCEEEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]