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The map label for this gene is ybaT [H]

Identifier: 108799616

GI number: 108799616

Start: 2801950

End: 2803302

Strand: Reverse

Name: ybaT [H]

Synonym: Mmcs_2649

Alternate gene names: 108799616

Gene position: 2803302-2801950 (Counterclockwise)

Preceding gene: 108799618

Following gene: 108799613

Centisome position: 49.13

GC content: 63.93

Gene sequence:

>1353_bases
GTGGACAAGAACGACACCTCGAAGATCTCCTTGATCGGGTCAGTCGCGTTGGGCACTGGCGTCATGATCGGTGCGGGGAT
CTTCGCGCTCGTGGGACAGGTGGCGGAGCTGGCCGGCTCGGCCGTGCCCTGGGCGTTCGTGGCCGGCGCTGTAGTGGCCG
CCGTCAGCGCCTACTCATACGTGCGATGCGCGAGCGCCAATCCGTCATCGGGTGGGATCGCCATGATCCTCAAAGCGGCG
TATGGCCCCGGCGTCGTCGCCGGAACCTTCTCGCTGTTCATGTATGTGTCCATGGTCCTGGCCGAGAGCCTGCTGGCGCG
AACCTTCGGCACCTACGCTCTGCGTCCGTTCGGACTGCAGGGTTCGGCGATCTTGGTGCCTGTCCTCGCCGTATTGGCGA
TCGTGATCGCGACGTCGGTCAACCTCGTGGGTAACCGTTGGGTCGAGTCGTCGGCGACGGTGACCGCGATCGTGAAGATC
ACCGGGATTGCCGTGCTCGCGATCGCCGGAATCTACGCCACCGGGTTGTCTTCGCTGTCACAGGTTTTCGAGACAGGAGC
CGAAGCCACGCCGCCGCGCAGTGGAATCCTCGGCTTCCTTGCCGGTGTCACACTCTGCATCCTTGCTTACAAGGGCTTCA
CCACGATCACGAATCAGGGCGACGACATCCGTGATCCCCGCCGAAACATCGGCCGGGCAATCGTCATCTCGCTCGTCGTG
TGCGCTGTCGTCTACCTGCTACTCACGATCGCCGTCACCGGGAGTCTGTCCGTCGCCGAGATCGTGGACGCACGTGACTA
CGCTCTCGCGGAGGCAGCGGAACCGCTCTTCGGCTCATGGGGTGTGCGGTTGACCGTTGCCGTCGCCGTCGTGGCGACGA
TGTCCGGTCTGATCGCGAGCTTGTACTCCGTGTCACGGCTCTACGACATGCTGCGGCACATGCATCAGGTGCCTGATGTA
CCCGGCAGCGTGCACCGCCCGTCACTGCTGATCACCGCGGCCGCTGCCATCGTCACGGCGGCACTGTTCGACCTGAGTCG
AATCGCTTCGCTGGGCGCGATGCTGTACCTGTCGATGGACATCGCGATCCACTGGGGATTGCTCCGTCGGTTGAGACACG
ATGTGGACTTCAAGGTTTGGGTTCCACTGCTGGCGATCGCGCTCGATGTCGTGGTGTTGGTGCCCTTCGTGATCCTCACC
GCGCGCAACAGTCTGCCAACACTCGTCATTTTCGGCGTCGTCTCAGCGGTGATCGTCCTGGGTCAGCAAGCGGCGGTGCG
GCATCGCAACCGGTCGTCGGCGGCGCCGGCCGCTCCGAACGACGGCACCGACGAGAATCAGGACCGCTCCTGA

Upstream 100 bases:

>100_bases
GGGACTTCGATACTTGCGTCGTTGAATCAGTTGCCACTACGCAAGTGAAGTAAACGTTCATCACCAAACCAGCTACCGAA
GCATCGGGAGGGCGTGGACC

Downstream 100 bases:

>100_bases
TCCTCGTCCCGCTGTCGGTCGAGCACCGACAACACCTCTCGGTACAAGAGCTCTGTGCGCTGCGCATCGACTGTCCCGAC
ATCCTGCGGGGCCACTCGTC

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MDKNDTSKISLIGSVALGTGVMIGAGIFALVGQVAELAGSAVPWAFVAGAVVAAVSAYSYVRCASANPSSGGIAMILKAA
YGPGVVAGTFSLFMYVSMVLAESLLARTFGTYALRPFGLQGSAILVPVLAVLAIVIATSVNLVGNRWVESSATVTAIVKI
TGIAVLAIAGIYATGLSSLSQVFETGAEATPPRSGILGFLAGVTLCILAYKGFTTITNQGDDIRDPRRNIGRAIVISLVV
CAVVYLLLTIAVTGSLSVAEIVDARDYALAEAAEPLFGSWGVRLTVAVAVVATMSGLIASLYSVSRLYDMLRHMHQVPDV
PGSVHRPSLLITAAAAIVTAALFDLSRIASLGAMLYLSMDIAIHWGLLRRLRHDVDFKVWVPLLAIALDVVVLVPFVILT
ARNSLPTLVIFGVVSAVIVLGQQAAVRHRNRSSAAPAAPNDGTDENQDRS

Sequences:

>Translated_450_residues
MDKNDTSKISLIGSVALGTGVMIGAGIFALVGQVAELAGSAVPWAFVAGAVVAAVSAYSYVRCASANPSSGGIAMILKAA
YGPGVVAGTFSLFMYVSMVLAESLLARTFGTYALRPFGLQGSAILVPVLAVLAIVIATSVNLVGNRWVESSATVTAIVKI
TGIAVLAIAGIYATGLSSLSQVFETGAEATPPRSGILGFLAGVTLCILAYKGFTTITNQGDDIRDPRRNIGRAIVISLVV
CAVVYLLLTIAVTGSLSVAEIVDARDYALAEAAEPLFGSWGVRLTVAVAVVATMSGLIASLYSVSRLYDMLRHMHQVPDV
PGSVHRPSLLITAAAAIVTAALFDLSRIASLGAMLYLSMDIAIHWGLLRRLRHDVDFKVWVPLLAIALDVVVLVPFVILT
ARNSLPTLVIFGVVSAVIVLGQQAAVRHRNRSSAAPAAPNDGTDENQDRS
>Mature_450_residues
MDKNDTSKISLIGSVALGTGVMIGAGIFALVGQVAELAGSAVPWAFVAGAVVAAVSAYSYVRCASANPSSGGIAMILKAA
YGPGVVAGTFSLFMYVSMVLAESLLARTFGTYALRPFGLQGSAILVPVLAVLAIVIATSVNLVGNRWVESSATVTAIVKI
TGIAVLAIAGIYATGLSSLSQVFETGAEATPPRSGILGFLAGVTLCILAYKGFTTITNQGDDIRDPRRNIGRAIVISLVV
CAVVYLLLTIAVTGSLSVAEIVDARDYALAEAAEPLFGSWGVRLTVAVAVVATMSGLIASLYSVSRLYDMLRHMHQVPDV
PGSVHRPSLLITAAAAIVTAALFDLSRIASLGAMLYLSMDIAIHWGLLRRLRHDVDFKVWVPLLAIALDVVVLVPFVILT
ARNSLPTLVIFGVVSAVIVLGQQAAVRHRNRSSAAPAAPNDGTDENQDRS

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI115648063, Length=416, Percent_Identity=23.7980769230769, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI115648022, Length=416, Percent_Identity=23.7980769230769, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI186910308, Length=371, Percent_Identity=24.7978436657682, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI186910306, Length=371, Percent_Identity=24.7978436657682, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI186910304, Length=371, Percent_Identity=24.7978436657682, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI187423910, Length=435, Percent_Identity=23.9080459770115, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI7657591, Length=435, Percent_Identity=23.9080459770115, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI33286428, Length=401, Percent_Identity=24.9376558603491, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI4507047, Length=397, Percent_Identity=25.1889168765743, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786694, Length=401, Percent_Identity=30.1745635910224, Blast_Score=142, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17540018, Length=425, Percent_Identity=24.9411764705882, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI32566699, Length=306, Percent_Identity=26.797385620915, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17568033, Length=346, Percent_Identity=21.9653179190751, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17532491, Length=267, Percent_Identity=26.2172284644195, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI221331183, Length=316, Percent_Identity=26.5822784810127, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI17647653, Length=316, Percent_Identity=26.5822784810127, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24664379, Length=316, Percent_Identity=26.5822784810127, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24651635, Length=325, Percent_Identity=24.6153846153846, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24651633, Length=325, Percent_Identity=24.6153846153846, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21357367, Length=420, Percent_Identity=22.8571428571429, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24667468, Length=378, Percent_Identity=26.4550264550265, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45550968, Length=376, Percent_Identity=21.8085106382979, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI19921172, Length=376, Percent_Identity=21.8085106382979, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 46787; Mature: 46787

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNDTSKISLIGSVALGTGVMIGAGIFALVGQVAELAGSAVPWAFVAGAVVAAVSAYSY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VRCASANPSSGGIAMILKAAYGPGVVAGTFSLFMYVSMVLAESLLARTFGTYALRPFGLQ
HEECCCCCCCCCHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GSAILVPVLAVLAIVIATSVNLVGNRWVESSATVTAIVKITGIAVLAIAGIYATGLSSLS
CCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVFETGAEATPPRSGILGFLAGVTLCILAYKGFTTITNQGDDIRDPRRNIGRAIVISLVV
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
CAVVYLLLTIAVTGSLSVAEIVDARDYALAEAAEPLFGSWGVRLTVAVAVVATMSGLIAS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHH
LYSVSRLYDMLRHMHQVPDVPGSVHRPSLLITAAAAIVTAALFDLSRIASLGAMLYLSMD
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIHWGLLRRLRHDVDFKVWVPLLAIALDVVVLVPFVILTARNSLPTLVIFGVVSAVIVL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GQQAAVRHRNRSSAAPAAPNDGTDENQDRS
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKNDTSKISLIGSVALGTGVMIGAGIFALVGQVAELAGSAVPWAFVAGAVVAAVSAYSY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VRCASANPSSGGIAMILKAAYGPGVVAGTFSLFMYVSMVLAESLLARTFGTYALRPFGLQ
HEECCCCCCCCCHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GSAILVPVLAVLAIVIATSVNLVGNRWVESSATVTAIVKITGIAVLAIAGIYATGLSSLS
CCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVFETGAEATPPRSGILGFLAGVTLCILAYKGFTTITNQGDDIRDPRRNIGRAIVISLVV
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
CAVVYLLLTIAVTGSLSVAEIVDARDYALAEAAEPLFGSWGVRLTVAVAVVATMSGLIAS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHH
LYSVSRLYDMLRHMHQVPDVPGSVHRPSLLITAAAAIVTAALFDLSRIASLGAMLYLSMD
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIHWGLLRRLRHDVDFKVWVPLLAIALDVVVLVPFVILTARNSLPTLVIFGVVSAVIVL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GQQAAVRHRNRSSAAPAAPNDGTDENQDRS
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]