| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799613
Identifier: 108799613
GI number: 108799613
Start: 2799601
End: 2800047
Strand: Reverse
Name: 108799613
Synonym: Mmcs_2646
Alternate gene names: NA
Gene position: 2800047-2799601 (Counterclockwise)
Preceding gene: 108799616
Following gene: 108799612
Centisome position: 49.08
GC content: 66.67
Gene sequence:
>447_bases ATGAGTGCGCACAACCGAACCGCGCGGGCGCGTCGTTTCGCCGTCCTGGCGGCCGCCGTTGCGGCCGCATCCGCGGCGAC GGGATGTTCGGACGGTTACTCCGCGCTTGGCACCCACACCGCGGAGGTGCTGATCAACGGCGTGGACATCGGAGAACGGC CCCGCATTCGATGCGAGCAGGTCGAGTGGGTCTGGTATGTGGAGACGCTCCGTGAGACACCGGGTTTCGGGGCCCAGGTG AAGACCGGTGCGACGGTTGAACCCCGCGCCGTTCGGATCGACGATCTGGGCAATTTCACGGGGAGCTTCTGGGAGGGAAC CATCGGTGCCGCCTCGGCGTCGATCGTCGAGGGAACGTTGATCCTGACGGGCACGGCCGAGGGCTACTTCCACGACGCCC CGAAAGAAAAGGCCACCGCGCGCTTCGCGATCCGTACCGACTGCTGA
Upstream 100 bases:
>100_bases GCATCGCATGGCGAGACACGTACCCCGATGGCGGGAGTCTGATACGTCGGGGCCAGCCCGGGGCAGGTATCAGCGTCCGC TTGCCGGGTAATGAAGAAGC
Downstream 100 bases:
>100_bases CCGGAGTATCACCAAGCGGTCACCCGGGCACTACTGCGGCGAATTCATCGATCGATCGCGAGGAGTGGCCAAGATGGTCG ACAACTCTCCCGAAGACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSAHNRTARARRFAVLAAAVAAASAATGCSDGYSALGTHTAEVLINGVDIGERPRIRCEQVEWVWYVETLRETPGFGAQV KTGATVEPRAVRIDDLGNFTGSFWEGTIGAASASIVEGTLILTGTAEGYFHDAPKEKATARFAIRTDC
Sequences:
>Translated_148_residues MSAHNRTARARRFAVLAAAVAAASAATGCSDGYSALGTHTAEVLINGVDIGERPRIRCEQVEWVWYVETLRETPGFGAQV KTGATVEPRAVRIDDLGNFTGSFWEGTIGAASASIVEGTLILTGTAEGYFHDAPKEKATARFAIRTDC >Mature_147_residues SAHNRTARARRFAVLAAAVAAASAATGCSDGYSALGTHTAEVLINGVDIGERPRIRCEQVEWVWYVETLRETPGFGAQVK TGATVEPRAVRIDDLGNFTGSFWEGTIGAASASIVEGTLILTGTAEGYFHDAPKEKATARFAIRTDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15705; Mature: 15573
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHNRTARARRFAVLAAAVAAASAATGCSDGYSALGTHTAEVLINGVDIGERPRIRCEQ CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCEEEE VEWVWYVETLRETPGFGAQVKTGATVEPRAVRIDDLGNFTGSFWEGTIGAASASIVEGTL EEEEEEEEHHHHCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECEE ILTGTAEGYFHDAPKEKATARFAIRTDC EEEECCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure SAHNRTARARRFAVLAAAVAAASAATGCSDGYSALGTHTAEVLINGVDIGERPRIRCEQ CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCEEEE VEWVWYVETLRETPGFGAQVKTGATVEPRAVRIDDLGNFTGSFWEGTIGAASASIVEGTL EEEEEEEEHHHHCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECEE ILTGTAEGYFHDAPKEKATARFAIRTDC EEEECCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA