| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799565
Identifier: 108799565
GI number: 108799565
Start: 2757060
End: 2758517
Strand: Reverse
Name: 108799565
Synonym: Mmcs_2598
Alternate gene names: NA
Gene position: 2758517-2757060 (Counterclockwise)
Preceding gene: 108799566
Following gene: 108799563
Centisome position: 48.35
GC content: 63.79
Gene sequence:
>1458_bases ATGGCACGACCCCGGAAGCCTGAAGACCCACAGCGGTGGCCGGTCCCCTGCGACCGATGTGGACGCCACTACCAGCTGGT CGCCAACTGGCCCAACGAATCAGTCTGCGGCTACTGCTATCAGGCGGCGAAACGCATCACCGGCATCTGCGCCTGCGGGC ACCAAGGGGTACTTCCTGGCATCATCGACAACCGGCCCGCGTGCCGGCGCTGCAGTGGCGTCGCCATCAACGTGGACTGC GTCAGCTGCGGCGTCGAAGCCGAACTCTACAGCGGCGGACGCTGCCAACGCTGCGTCCTCGGAGCCACCGCACAACGCCT GTTGACCAGCCCCGACACAGGGGCCATTGCACCGCCGCTGCAGGTCATCGTCGACGCCCTGACCACCATGGAGCGCCCGA ACAGCGGACTGACATGGATCCGGCAGGCGCACGTTCAAGCCGTCCTGCGTGACCTCGCCCGCCATCACACTCTCACCCAC GAAATCCTTGACGGCATGCCGGCCGGTCGGACCTCCGACTACGTGCGCAGTCTGCTCGTCGAACACGGCGCCCTTCCTTC GCGTGACGAGCGACTTGCCCGGTTCCAGACGTGGGCTGCCACGGCGCTCGAACGCATCACCCGGGCCGACCACCGAAAGA TAATCTCCCGCTTCCTTCGGTGGAACCTAGAAAAACGGCTTCAATCGATGAGCCCGGTCACCGACTCTGCGTTCCTGCGG GCCAAGCAATCCCTCACCGTCACAATCGAGTTCTGCAACTGGCTCGTCGCTGAACACAACACTGGGATGGACCAACTCAC GCAATCGCACATCGACCTCTGGCAATCAACCGGGCCAACCACCCGCGAACACATCGCTCGCTTCATCCGGTGGGCCATCA AGAGCAGGCTGATCCCCGCCGATCTCGAAGTGACACCCCATCGCCGCGGGACGGCACCGCGAATGCCAATCACCGAGCAG AACGCTGTCATAGAGAAAGTCGCACATCAGCAGACGCTCCATCCCCGAGATCGCCTCGCCGCCATCCTCGTCATCGTGTT TGCCCAACAAATGGAAGACGTCGCAGCGCTCACCTGGGATCGCGTGACGATCACCGCCGAAGCCGCCACTATCACGCTCG CCGATACTCCGATCGAACTGCCACCGCCACTCGACGAGCCACTCAGGGCGCTCGCAGCCAGCAACTACAACAAGCAGACC GCTGCACATCCCAAGTCTCCGTGGATATTTCGCGGCTACCGGCCCGGCATGCACCTCGCGCCGACGCATCTCCGAAATCA CCTGCGCCCCGTGCTCGCCTCCCTGGAAGCGCGCCTCGGCACACTCAACGAGCTGACTCAGACCACCCCAATCGCGATCC TTGCCGAGACGCTCGGGTATAGCCCGCAGACGCTGGAGGCCCACGCCAAGGCATCAGCATCGACCTACTCTCGATACATC GCCACGCGTCTGGATTGA
Upstream 100 bases:
>100_bases CAGGCAGCAGCATCAGCCAACGCCCCGCAGCCACGCGAACTGGGAGTGACACCGGGCAACCCGGTGGCCAAACGTATCCG CATCGTGCAGGACGATGTCG
Downstream 100 bases:
>100_bases ACGCTGCAACTTGCCGATTCGACTTCGAGGTGCGCCTGGGGCTAGGTACGAACCCGTACCCCAGGCGCCCCGGGACTACG CCGCGCGAACCTTGAGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MARPRKPEDPQRWPVPCDRCGRHYQLVANWPNESVCGYCYQAAKRITGICACGHQGVLPGIIDNRPACRRCSGVAINVDC VSCGVEAELYSGGRCQRCVLGATAQRLLTSPDTGAIAPPLQVIVDALTTMERPNSGLTWIRQAHVQAVLRDLARHHTLTH EILDGMPAGRTSDYVRSLLVEHGALPSRDERLARFQTWAATALERITRADHRKIISRFLRWNLEKRLQSMSPVTDSAFLR AKQSLTVTIEFCNWLVAEHNTGMDQLTQSHIDLWQSTGPTTREHIARFIRWAIKSRLIPADLEVTPHRRGTAPRMPITEQ NAVIEKVAHQQTLHPRDRLAAILVIVFAQQMEDVAALTWDRVTITAEAATITLADTPIELPPPLDEPLRALAASNYNKQT AAHPKSPWIFRGYRPGMHLAPTHLRNHLRPVLASLEARLGTLNELTQTTPIAILAETLGYSPQTLEAHAKASASTYSRYI ATRLD
Sequences:
>Translated_485_residues MARPRKPEDPQRWPVPCDRCGRHYQLVANWPNESVCGYCYQAAKRITGICACGHQGVLPGIIDNRPACRRCSGVAINVDC VSCGVEAELYSGGRCQRCVLGATAQRLLTSPDTGAIAPPLQVIVDALTTMERPNSGLTWIRQAHVQAVLRDLARHHTLTH EILDGMPAGRTSDYVRSLLVEHGALPSRDERLARFQTWAATALERITRADHRKIISRFLRWNLEKRLQSMSPVTDSAFLR AKQSLTVTIEFCNWLVAEHNTGMDQLTQSHIDLWQSTGPTTREHIARFIRWAIKSRLIPADLEVTPHRRGTAPRMPITEQ NAVIEKVAHQQTLHPRDRLAAILVIVFAQQMEDVAALTWDRVTITAEAATITLADTPIELPPPLDEPLRALAASNYNKQT AAHPKSPWIFRGYRPGMHLAPTHLRNHLRPVLASLEARLGTLNELTQTTPIAILAETLGYSPQTLEAHAKASASTYSRYI ATRLD >Mature_484_residues ARPRKPEDPQRWPVPCDRCGRHYQLVANWPNESVCGYCYQAAKRITGICACGHQGVLPGIIDNRPACRRCSGVAINVDCV SCGVEAELYSGGRCQRCVLGATAQRLLTSPDTGAIAPPLQVIVDALTTMERPNSGLTWIRQAHVQAVLRDLARHHTLTHE ILDGMPAGRTSDYVRSLLVEHGALPSRDERLARFQTWAATALERITRADHRKIISRFLRWNLEKRLQSMSPVTDSAFLRA KQSLTVTIEFCNWLVAEHNTGMDQLTQSHIDLWQSTGPTTREHIARFIRWAIKSRLIPADLEVTPHRRGTAPRMPITEQN AVIEKVAHQQTLHPRDRLAAILVIVFAQQMEDVAALTWDRVTITAEAATITLADTPIELPPPLDEPLRALAASNYNKQTA AHPKSPWIFRGYRPGMHLAPTHLRNHLRPVLASLEARLGTLNELTQTTPIAILAETLGYSPQTLEAHAKASASTYSRYIA TRLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54088; Mature: 53956
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPRKPEDPQRWPVPCDRCGRHYQLVANWPNESVCGYCYQAAKRITGICACGHQGVLPG CCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC IIDNRPACRRCSGVAINVDCVSCGVEAELYSGGRCQRCVLGATAQRLLTSPDTGAIAPPL CCCCCCHHHHHCCCEEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH QVIVDALTTMERPNSGLTWIRQAHVQAVLRDLARHHTLTHEILDGMPAGRTSDYVRSLLV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH EHGALPSRDERLARFQTWAATALERITRADHRKIISRFLRWNLEKRLQSMSPVTDSAFLR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHH AKQSLTVTIEFCNWLVAEHNTGMDQLTQSHIDLWQSTGPTTREHIARFIRWAIKSRLIPA HCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC DLEVTPHRRGTAPRMPITEQNAVIEKVAHQQTLHPRDRLAAILVIVFAQQMEDVAALTWD CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEC RVTITAEAATITLADTPIELPPPLDEPLRALAASNYNKQTAAHPKSPWIFRGYRPGMHLA CEEEEEECEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCC PTHLRNHLRPVLASLEARLGTLNELTQTTPIAILAETLGYSPQTLEAHAKASASTYSRYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ATRLD HHCCC >Mature Secondary Structure ARPRKPEDPQRWPVPCDRCGRHYQLVANWPNESVCGYCYQAAKRITGICACGHQGVLPG CCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC IIDNRPACRRCSGVAINVDCVSCGVEAELYSGGRCQRCVLGATAQRLLTSPDTGAIAPPL CCCCCCHHHHHCCCEEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH QVIVDALTTMERPNSGLTWIRQAHVQAVLRDLARHHTLTHEILDGMPAGRTSDYVRSLLV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH EHGALPSRDERLARFQTWAATALERITRADHRKIISRFLRWNLEKRLQSMSPVTDSAFLR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHH AKQSLTVTIEFCNWLVAEHNTGMDQLTQSHIDLWQSTGPTTREHIARFIRWAIKSRLIPA HCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC DLEVTPHRRGTAPRMPITEQNAVIEKVAHQQTLHPRDRLAAILVIVFAQQMEDVAALTWD CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEC RVTITAEAATITLADTPIELPPPLDEPLRALAASNYNKQTAAHPKSPWIFRGYRPGMHLA CEEEEEECEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCC PTHLRNHLRPVLASLEARLGTLNELTQTTPIAILAETLGYSPQTLEAHAKASASTYSRYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ATRLD HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA