| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799551
Identifier: 108799551
GI number: 108799551
Start: 2743471
End: 2744430
Strand: Reverse
Name: 108799551
Synonym: Mmcs_2584
Alternate gene names: NA
Gene position: 2744430-2743471 (Counterclockwise)
Preceding gene: 108799553
Following gene: 108799550
Centisome position: 48.1
GC content: 67.29
Gene sequence:
>960_bases ATGCTTCGCCACCTCGCGCGTACCGCCCTGACCCTTGCCGTCCTCGCCTCGGCCGTCGCCTGCAGCAGCACCGACGACAA CTCGGGCGGCTACACCCTGCGCATCGGCGCGACATCGCCGACCGGCACGCCCGCCGGGTCGCTCGGATGGGGTGACAAGC AGGGCATCCTCGCCGAGCAACTCAAAGACGCCGGCGTCGACAACATCGAGTACTCGTTCTTCCAGTCCGGCAGCGACGTC GCCTCGGCGTTGTTCGCCGGTGCGATCGACGTCGCCGCCATCGGCGACAACCCAGCCCTGCGGGCCCGCAGCCGCGACCC GAAAGTCGTTCTACTGGCGCTTGATTCGATCAGCAGCGACGCCTGGCTCGTGGGCGCCAAGGGTGGACCGACCGACATCC AGGGGTTGGTGGGCAAGACCGTCACCGCACCGCAGGGCACCATCCGGGACCGCGCGGCCAAACAGCTGATCGACGCGGCC GGGCTCACCGGCAAGATCCAGGTCCGCGATGTACCGACACCCGAATCGATCGCCGGTCTGAGCTCGGGGCAGATCGACGC CACCGTCGTGACCGGCGCCAGCGCGATCGAACTGCAGCACAAGGGTTTCCCGATCATCGACAGCCTGTCCCGGCACGGAC TGGGCAGCACCGGCACCAACATCGCGCTGACCACGTTCACGGACGAACATCCCGAGTTCGCCGACGCCTGGCGTCAGGCC GTCACCGCGGTCAACAGCGACATCCAGAAGAACTTCGACGAGTACGCCACCTGGGTCGCGCAGACCGACGGGACCGACGT CGAATTCGTCAAGGAGTCGACACGGCCCGACGAGTTCAACACCGAACCGTTCCCCGCACAGGGGGTGGATCAGCTCGAGG CGGCCTACGACTTCCTCAACGCCGACGGCTCCCTGGAGAACCAGTACTCGGTACGCGAATGGGCCGGGGCCCAGTCATGA
Upstream 100 bases:
>100_bases CTTCCCGTCAGACTGATCCGAACCGTCGCCGCCGCAGGGGCCTTCGACATCTACTGGGGTTCGATCGTGTTCCCACGTGC ACCCTCTCGGAGGCCCATCC
Downstream 100 bases:
>100_bases CCGCCGTCGTCGAAGCGGTACGCGCGGACGCCGCCACACCGCGACTGATCGACGTCGTCGCCGGGCACCGTCGCCGCCGC GGCGTCTGGGCCCGGATCCC
Product: nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLRHLARTALTLAVLASAVACSSTDDNSGGYTLRIGATSPTGTPAGSLGWGDKQGILAEQLKDAGVDNIEYSFFQSGSDV ASALFAGAIDVAAIGDNPALRARSRDPKVVLLALDSISSDAWLVGAKGGPTDIQGLVGKTVTAPQGTIRDRAAKQLIDAA GLTGKIQVRDVPTPESIAGLSSGQIDATVVTGASAIELQHKGFPIIDSLSRHGLGSTGTNIALTTFTDEHPEFADAWRQA VTAVNSDIQKNFDEYATWVAQTDGTDVEFVKESTRPDEFNTEPFPAQGVDQLEAAYDFLNADGSLENQYSVREWAGAQS
Sequences:
>Translated_319_residues MLRHLARTALTLAVLASAVACSSTDDNSGGYTLRIGATSPTGTPAGSLGWGDKQGILAEQLKDAGVDNIEYSFFQSGSDV ASALFAGAIDVAAIGDNPALRARSRDPKVVLLALDSISSDAWLVGAKGGPTDIQGLVGKTVTAPQGTIRDRAAKQLIDAA GLTGKIQVRDVPTPESIAGLSSGQIDATVVTGASAIELQHKGFPIIDSLSRHGLGSTGTNIALTTFTDEHPEFADAWRQA VTAVNSDIQKNFDEYATWVAQTDGTDVEFVKESTRPDEFNTEPFPAQGVDQLEAAYDFLNADGSLENQYSVREWAGAQS >Mature_319_residues MLRHLARTALTLAVLASAVACSSTDDNSGGYTLRIGATSPTGTPAGSLGWGDKQGILAEQLKDAGVDNIEYSFFQSGSDV ASALFAGAIDVAAIGDNPALRARSRDPKVVLLALDSISSDAWLVGAKGGPTDIQGLVGKTVTAPQGTIRDRAAKQLIDAA GLTGKIQVRDVPTPESIAGLSSGQIDATVVTGASAIELQHKGFPIIDSLSRHGLGSTGTNIALTTFTDEHPEFADAWRQA VTAVNSDIQKNFDEYATWVAQTDGTDVEFVKESTRPDEFNTEPFPAQGVDQLEAAYDFLNADGSLENQYSVREWAGAQS
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33399; Mature: 33399
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHLARTALTLAVLASAVACSSTDDNSGGYTLRIGATSPTGTPAGSLGWGDKQGILAEQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH LKDAGVDNIEYSFFQSGSDVASALFAGAIDVAAIGDNPALRARSRDPKVVLLALDSISSD HHHCCCCCCCHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC AWLVGAKGGPTDIQGLVGKTVTAPQGTIRDRAAKQLIDAAGLTGKIQVRDVPTPESIAGL EEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCC SSGQIDATVVTGASAIELQHKGFPIIDSLSRHGLGSTGTNIALTTFTDEHPEFADAWRQA CCCCEEEEEEECCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHH VTAVNSDIQKNFDEYATWVAQTDGTDVEFVKESTRPDEFNTEPFPAQGVDQLEAAYDFLN HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC ADGSLENQYSVREWAGAQS CCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MLRHLARTALTLAVLASAVACSSTDDNSGGYTLRIGATSPTGTPAGSLGWGDKQGILAEQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH LKDAGVDNIEYSFFQSGSDVASALFAGAIDVAAIGDNPALRARSRDPKVVLLALDSISSD HHHCCCCCCCHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC AWLVGAKGGPTDIQGLVGKTVTAPQGTIRDRAAKQLIDAAGLTGKIQVRDVPTPESIAGL EEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCC SSGQIDATVVTGASAIELQHKGFPIIDSLSRHGLGSTGTNIALTTFTDEHPEFADAWRQA CCCCEEEEEEECCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHH VTAVNSDIQKNFDEYATWVAQTDGTDVEFVKESTRPDEFNTEPFPAQGVDQLEAAYDFLN HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC ADGSLENQYSVREWAGAQS CCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA