| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799323
Identifier: 108799323
GI number: 108799323
Start: 2501243
End: 2501800
Strand: Reverse
Name: 108799323
Synonym: Mmcs_2356
Alternate gene names: NA
Gene position: 2501800-2501243 (Counterclockwise)
Preceding gene: 108799327
Following gene: 108799318
Centisome position: 43.85
GC content: 67.56
Gene sequence:
>558_bases ATGAGCAAGTGGTTACTGCGCGGACTGGTGTTCGCAGCCCTGATGGTGATCGTCCGATTGCTGCAGGGGGCGATGATCAA CACGTGGGAAACCAGGGCGGCGACGATCAGCATCGTTCTCGTGTCGGTGTACGCCCTCGTGGCCTTCGCGTGGGGGTTCG TCGACGGTCGACGGGACGCGCGCCAGAACCCCGATCCGGACCGCCGCTCGGATCTGGCGATGACGTGGCTGCTGACCGGT CTGTTCGCCGGAATCGTCAGCGGGTTCGTCGCGTGGCTGATCGGGGTGTTCTACAAGAACCTCTACGTCGAGGCGCTGCT CAACGAGCTCACCACGTTCGCGGCGTTCACCGCGCTGCTGACGTTCGTGCTCGCGATCATCGGCGTGGCGCTGGGCCGCT GGCTGGTCGACCGCAAGACGCCCGACGAGCCGCGCAAGCGGCACGGTGAGGACGACGACCGCGCCGACACCGACGTGTTC GCCGCGGTCCGTCCGGGCGGCCAGGACGGTCGCGACGGCCACGACGATTCCCCGACCACAGAGCAGCAGCGCGCCTAG
Upstream 100 bases:
>100_bases GCATCGCATCCAGTTCGGCGGCGGCCAGCCGCTCGCGCAGGCGGTCTCTACGCTGGGAAAGAGTCACAGCCGCTGACGGT ACTCGCTACGCTGTTGCGCC
Downstream 100 bases:
>100_bases CGCGGGCCTAACCGGCTGCGAGGTAGCGCAGGGCCAGCACGTAGCCCTGCACGCCCAGGCCGACGATCACGCCGGTCGCG ACCCCACTCAGGTACGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSKWLLRGLVFAALMVIVRLLQGAMINTWETRAATISIVLVSVYALVAFAWGFVDGRRDARQNPDPDRRSDLAMTWLLTG LFAGIVSGFVAWLIGVFYKNLYVEALLNELTTFAAFTALLTFVLAIIGVALGRWLVDRKTPDEPRKRHGEDDDRADTDVF AAVRPGGQDGRDGHDDSPTTEQQRA
Sequences:
>Translated_185_residues MSKWLLRGLVFAALMVIVRLLQGAMINTWETRAATISIVLVSVYALVAFAWGFVDGRRDARQNPDPDRRSDLAMTWLLTG LFAGIVSGFVAWLIGVFYKNLYVEALLNELTTFAAFTALLTFVLAIIGVALGRWLVDRKTPDEPRKRHGEDDDRADTDVF AAVRPGGQDGRDGHDDSPTTEQQRA >Mature_184_residues SKWLLRGLVFAALMVIVRLLQGAMINTWETRAATISIVLVSVYALVAFAWGFVDGRRDARQNPDPDRRSDLAMTWLLTGL FAGIVSGFVAWLIGVFYKNLYVEALLNELTTFAAFTALLTFVLAIIGVALGRWLVDRKTPDEPRKRHGEDDDRADTDVFA AVRPGGQDGRDGHDDSPTTEQQRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20540; Mature: 20409
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKWLLRGLVFAALMVIVRLLQGAMINTWETRAATISIVLVSVYALVAFAWGFVDGRRDA CHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC RQNPDPDRRSDLAMTWLLTGLFAGIVSGFVAWLIGVFYKNLYVEALLNELTTFAAFTALL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFVLAIIGVALGRWLVDRKTPDEPRKRHGEDDDRADTDVFAAVRPGGQDGRDGHDDSPTT HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC EQQRA CCCCC >Mature Secondary Structure SKWLLRGLVFAALMVIVRLLQGAMINTWETRAATISIVLVSVYALVAFAWGFVDGRRDA HHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC RQNPDPDRRSDLAMTWLLTGLFAGIVSGFVAWLIGVFYKNLYVEALLNELTTFAAFTALL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFVLAIIGVALGRWLVDRKTPDEPRKRHGEDDDRADTDVFAAVRPGGQDGRDGHDDSPTT HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC EQQRA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA