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The map label for this gene is ypfJ [C]

Identifier: 108799271

GI number: 108799271

Start: 2445050

End: 2446003

Strand: Reverse

Name: ypfJ [C]

Synonym: Mmcs_2304

Alternate gene names: 108799271

Gene position: 2446003-2445050 (Counterclockwise)

Preceding gene: 108799273

Following gene: 108799270

Centisome position: 42.87

GC content: 67.3

Gene sequence:

>954_bases
GTGTGGGAGGGTGAACACCGGCGCTGGGTCGGAGCGCCTCCCCGAGCGCGGACGGAGTGTGCGATGACCTTCAACGAGGG
CATGCAGATCGACACCAGTACCACCTCGAGCAGTGGCGGCGGGCGCGGCGGCGGACGCGGAATCGCGGTCGGTGGGGGCA
TCGGTGGTCTGCTGATCGTGGTCGTCGCGCTGTTCCTCGGTGTGGATCCCGGCACGGTGTTGCCGGAACAACAGCAGATC
GGCACCGAGGGCGTCCAGGCGCCGGGCTTCGACCTGAGCCAGTGCAAGACCGGTGCCGACGCCAACGAGTTCGTGCAGTG
CCGGGTGGTGGCGACCGGCAACTCCCTCGACGCGGTGTGGTCGCAGCTCAAACCGGATTACACGCGGCCGCAGGTGGAGA
TCTTCTCCGGGAGCGTGGACACCCGCTGCGGTCCGGCCACCAGCGCGGTCGGCCCGTTCTACTGCCCGGCCGATCAGACC
GCCTATTTCGACACCGACTTCTTCGACGTCCTGAGGGATCAGTTCGGTTCCAGCGGTGGACCTTTCGCCCAGGAGTATGT
CGTCGCCCATGAATTCGGCCACCACGTGCAGCAACTGCAGGGTTCGCTCGCACGAGCGCAGGAGGATCCAGAGGGACCCA
CCGGCGGCGGGGTGCGCACCGAGTTGCAGGCCGACTGCTACGCGGGTGTGTGGGCACACTATGCGGCGGTCACCACACAG
GAGAGCACCGGCGTCCCGTTCCTGGAACCGTTGACCGACAAGGACATCGCCGACGCGCTGTCGGCCGCATCGGCGGTCGG
TGACGACCGGATCCAGGAGGCCGCGACCGGCCGGGTCAATCCCGAATCGTGGACCCACGGATCGTCGGAGCAGCGGCAGA
AGTGGTTCACCGTCGGCTACCAGACCGGCGATCCGACGAAGTGCGACACGTTCGCCACGAACGATCTTGGTTAG

Upstream 100 bases:

>100_bases
GCCACACGTGAACGCCGCCTTCGTTGGTGCCCCGCAACCGTCCGAGCGCGGTGTGCGCGACGGTTTGAACTTCGGCGACG
GCGGACACACCCGAATCGTA

Downstream 100 bases:

>100_bases
GCCACACACGGCGGTCGATGCCGTCGCCGAACGCTACCTCGACACCCTCGCCGCGCTGGATCCCTGTACCGCAACCGAAC
TCGGCATCGCCGGCGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MWEGEHRRWVGAPPRARTECAMTFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIVVVALFLGVDPGTVLPEQQQI
GTEGVQAPGFDLSQCKTGADANEFVQCRVVATGNSLDAVWSQLKPDYTRPQVEIFSGSVDTRCGPATSAVGPFYCPADQT
AYFDTDFFDVLRDQFGSSGGPFAQEYVVAHEFGHHVQQLQGSLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQ
ESTGVPFLEPLTDKDIADALSAASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGYQTGDPTKCDTFATNDLG

Sequences:

>Translated_317_residues
MWEGEHRRWVGAPPRARTECAMTFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIVVVALFLGVDPGTVLPEQQQI
GTEGVQAPGFDLSQCKTGADANEFVQCRVVATGNSLDAVWSQLKPDYTRPQVEIFSGSVDTRCGPATSAVGPFYCPADQT
AYFDTDFFDVLRDQFGSSGGPFAQEYVVAHEFGHHVQQLQGSLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQ
ESTGVPFLEPLTDKDIADALSAASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGYQTGDPTKCDTFATNDLG
>Mature_317_residues
MWEGEHRRWVGAPPRARTECAMTFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIVVVALFLGVDPGTVLPEQQQI
GTEGVQAPGFDLSQCKTGADANEFVQCRVVATGNSLDAVWSQLKPDYTRPQVEIFSGSVDTRCGPATSAVGPFYCPADQT
AYFDTDFFDVLRDQFGSSGGPFAQEYVVAHEFGHHVQQLQGSLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQ
ESTGVPFLEPLTDKDIADALSAASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGYQTGDPTKCDTFATNDLG

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=268, Percent_Identity=38.8059701492537, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 33581; Mature: 33581

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWEGEHRRWVGAPPRARTECAMTFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIV
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHH
VVALFLGVDPGTVLPEQQQIGTEGVQAPGFDLSQCKTGADANEFVQCRVVATGNSLDAVW
HHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCHHHHH
SQLKPDYTRPQVEIFSGSVDTRCGPATSAVGPFYCPADQTAYFDTDFFDVLRDQFGSSGG
HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHCCCCC
PFAQEYVVAHEFGHHVQQLQGSLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEECC
ESTGVPFLEPLTDKDIADALSAASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGY
CCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEEEE
QTGDPTKCDTFATNDLG
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWEGEHRRWVGAPPRARTECAMTFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIV
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHH
VVALFLGVDPGTVLPEQQQIGTEGVQAPGFDLSQCKTGADANEFVQCRVVATGNSLDAVW
HHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCHHHHH
SQLKPDYTRPQVEIFSGSVDTRCGPATSAVGPFYCPADQTAYFDTDFFDVLRDQFGSSGG
HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHCCCCC
PFAQEYVVAHEFGHHVQQLQGSLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEECC
ESTGVPFLEPLTDKDIADALSAASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGY
CCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEEEE
QTGDPTKCDTFATNDLG
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]