| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108799270
Identifier: 108799270
GI number: 108799270
Start: 2443408
End: 2445057
Strand: Reverse
Name: 108799270
Synonym: Mmcs_2303
Alternate gene names: NA
Gene position: 2445057-2443408 (Counterclockwise)
Preceding gene: 108799271
Following gene: 108799269
Centisome position: 42.85
GC content: 70.24
Gene sequence:
>1650_bases TTGGTTAGGCCACACACGGCGGTCGATGCCGTCGCCGAACGCTACCTCGACACCCTCGCCGCGCTGGATCCCTGTACCGC AACCGAACTCGGCATCGCCGGCGGCGACCGCAACTACGACGAGGACATCACCGACTACTCCCCCGACGCCGTCGCCGCAC GGGCCGAGGCCGCCCGTTCGGCGCTCAAGGAACTGCGCGCCGTCGTCGCGGTGGACGAGACCGACGCGGTGACCGCCGCC GCGATGCGCGAACGACTCGGGGTGCTCATCGACATCCACGAGGCCGGACTCGACATCGGCGAACTCAACGTGATCGCCTC ACCGCTGCAGACCATGCGGGACGTGTTCGACCTGATGCCCACCGACACCGCCGACGACTGGACGGTGATCGACCGGCGAC TGGCCAAGCTGCCCGAGCGGGTGCCCGGCTACGCCGAGGCGCTGCGCACCGCCGTGGCCGAAGGTCGTCCACCGGCGATC AGGCAGGTGCAGCGCGGCGTCGAGCAGGCCGCCCAGATCGAGCAGTTGTTCCTCGACATGGTGTCCGGCGCCACGGTGGC CCCCGCGCTGCGGGCCGACCTCGACCGGCACGCCGCCGCCGCCGCGGAGGCCTACCGGGGCCTGGGCCGGGTGTTGCGCG AGGACATCGCCCCGTACGCCCGCGAGCGCGACGCCTTCGGCCGGGACGCCTACCGGCTGATGTCACGGTCGTTCCTCGGC ACGGAGGTCGACCTCGACGAGACCTACGCCTGGGGTCTCGAACACCTCAACGCGATCGTGGCCGAACAGGAGACCGTCGC CGAGCGGCTGTATCCCGGTGCGGGCGTTGCCGAGACGATCCGCCGCCTCGACGAGGAACCGCGGTATCAGGTGCACGGCA CGGATGCGCTGCAGGCGTGGATGCAGGATCTGTCCGACCGCGTGGTGGACGCCCTGGCGGACACGCATTTCGACATCGAC CCGGCGTTGCGCAACCTCGAGTGCCGGATCGCCCCCACCCACACCGGCGGCATCTACTACACCGGCCCTTCGGAAGACCT CACCCGTCCCGGTCGGATGTGGTGGTCGGTGCCGCCCGGTAAGCAGACCTTCCACACCTGGCAGGAGACGACGACGGTGT TCCACGAGGGGGTGCCCGGACACCACCTGCAGATCGGGCGCGCCGTCGTACTCGCCGACCGGCTGAACCGGTGGCGCCGG TTGGGCTGCTGGGTGTCCGGCCACGGTGAGGGCTGGGCGCTCTACGCCGAGCGGTTGATGGCCGAACTGGGGTGGCTCGA CGACGACGGCGCACGGATGGGCATGCTCGACGCCCAGGGGTTCCGCGCCGCCCGGGTGGCGATCGACATCGGCGTGCATT GTGAACTCACCGCCCCCGACGGCGGAACGTGGGACGCCGACCGGGCGTGGGATCTGCTGGCCGCGCACTGCGCACAGTCG GAGAAGACACGGCGTTTCGAACTAGACCGGTACCTCGGCTGGCCGGGGCAGGCGCCGTCCTACGCTGTCGGACAACGCAT CTGGGAGCAACTTCGGGAAACCATGCTGGCTCGCAGCATGACGCTCAAGGACTTCCACAGCCGCGCACTGGATCTCGGCG GCCTCCCGCTCGACGTGCTGCGTTCGGCGCTGGTCGGCGAACTCGCATGA
Upstream 100 bases:
>100_bases TCGTGGACCCACGGATCGTCGGAGCAGCGGCAGAAGTGGTTCACCGTCGGCTACCAGACCGGCGATCCGACGAAGTGCGA CACGTTCGCCACGAACGATC
Downstream 100 bases:
>100_bases CACGCGCGGACGATCCGATCGAACCGGATACCAAGGACTGGACCTGGGTGCTGTCGCGGCCGTGCCCGGACTGCGGCTTC GACGCCTCGGCGGTGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MVRPHTAVDAVAERYLDTLAALDPCTATELGIAGGDRNYDEDITDYSPDAVAARAEAARSALKELRAVVAVDETDAVTAA AMRERLGVLIDIHEAGLDIGELNVIASPLQTMRDVFDLMPTDTADDWTVIDRRLAKLPERVPGYAEALRTAVAEGRPPAI RQVQRGVEQAAQIEQLFLDMVSGATVAPALRADLDRHAAAAAEAYRGLGRVLREDIAPYARERDAFGRDAYRLMSRSFLG TEVDLDETYAWGLEHLNAIVAEQETVAERLYPGAGVAETIRRLDEEPRYQVHGTDALQAWMQDLSDRVVDALADTHFDID PALRNLECRIAPTHTGGIYYTGPSEDLTRPGRMWWSVPPGKQTFHTWQETTTVFHEGVPGHHLQIGRAVVLADRLNRWRR LGCWVSGHGEGWALYAERLMAELGWLDDDGARMGMLDAQGFRAARVAIDIGVHCELTAPDGGTWDADRAWDLLAAHCAQS EKTRRFELDRYLGWPGQAPSYAVGQRIWEQLRETMLARSMTLKDFHSRALDLGGLPLDVLRSALVGELA
Sequences:
>Translated_549_residues MVRPHTAVDAVAERYLDTLAALDPCTATELGIAGGDRNYDEDITDYSPDAVAARAEAARSALKELRAVVAVDETDAVTAA AMRERLGVLIDIHEAGLDIGELNVIASPLQTMRDVFDLMPTDTADDWTVIDRRLAKLPERVPGYAEALRTAVAEGRPPAI RQVQRGVEQAAQIEQLFLDMVSGATVAPALRADLDRHAAAAAEAYRGLGRVLREDIAPYARERDAFGRDAYRLMSRSFLG TEVDLDETYAWGLEHLNAIVAEQETVAERLYPGAGVAETIRRLDEEPRYQVHGTDALQAWMQDLSDRVVDALADTHFDID PALRNLECRIAPTHTGGIYYTGPSEDLTRPGRMWWSVPPGKQTFHTWQETTTVFHEGVPGHHLQIGRAVVLADRLNRWRR LGCWVSGHGEGWALYAERLMAELGWLDDDGARMGMLDAQGFRAARVAIDIGVHCELTAPDGGTWDADRAWDLLAAHCAQS EKTRRFELDRYLGWPGQAPSYAVGQRIWEQLRETMLARSMTLKDFHSRALDLGGLPLDVLRSALVGELA >Mature_549_residues MVRPHTAVDAVAERYLDTLAALDPCTATELGIAGGDRNYDEDITDYSPDAVAARAEAARSALKELRAVVAVDETDAVTAA AMRERLGVLIDIHEAGLDIGELNVIASPLQTMRDVFDLMPTDTADDWTVIDRRLAKLPERVPGYAEALRTAVAEGRPPAI RQVQRGVEQAAQIEQLFLDMVSGATVAPALRADLDRHAAAAAEAYRGLGRVLREDIAPYARERDAFGRDAYRLMSRSFLG TEVDLDETYAWGLEHLNAIVAEQETVAERLYPGAGVAETIRRLDEEPRYQVHGTDALQAWMQDLSDRVVDALADTHFDID PALRNLECRIAPTHTGGIYYTGPSEDLTRPGRMWWSVPPGKQTFHTWQETTTVFHEGVPGHHLQIGRAVVLADRLNRWRR LGCWVSGHGEGWALYAERLMAELGWLDDDGARMGMLDAQGFRAARVAIDIGVHCELTAPDGGTWDADRAWDLLAAHCAQS EKTRRFELDRYLGWPGQAPSYAVGQRIWEQLRETMLARSMTLKDFHSRALDLGGLPLDVLRSALVGELA
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60717; Mature: 60717
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPHTAVDAVAERYLDTLAALDPCTATELGIAGGDRNYDEDITDYSPDAVAARAEAARS CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALKELRAVVAVDETDAVTAAAMRERLGVLIDIHEAGLDIGELNVIASPLQTMRDVFDLMP HHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCC TDTADDWTVIDRRLAKLPERVPGYAEALRTAVAEGRPPAIRQVQRGVEQAAQIEQLFLDM CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VSGATVAPALRADLDRHAAAAAEAYRGLGRVLREDIAPYARERDAFGRDAYRLMSRSFLG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC TEVDLDETYAWGLEHLNAIVAEQETVAERLYPGAGVAETIRRLDEEPRYQVHGTDALQAW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCHHHHHH MQDLSDRVVDALADTHFDIDPALRNLECRIAPTHTGGIYYTGPSEDLTRPGRMWWSVPPG HHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCCCEEEECCCHHCCCCCCEEECCCCC KQTFHTWQETTTVFHEGVPGHHLQIGRAVVLADRLNRWRRLGCWVSGHGEGWALYAERLM CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH AELGWLDDDGARMGMLDAQGFRAARVAIDIGVHCELTAPDGGTWDADRAWDLLAAHCAQS HHHCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHCC EKTRRFELDRYLGWPGQAPSYAVGQRIWEQLRETMLARSMTLKDFHSRALDLGGLPLDVL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RSALVGELA HHHHHHCCC >Mature Secondary Structure MVRPHTAVDAVAERYLDTLAALDPCTATELGIAGGDRNYDEDITDYSPDAVAARAEAARS CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALKELRAVVAVDETDAVTAAAMRERLGVLIDIHEAGLDIGELNVIASPLQTMRDVFDLMP HHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCC TDTADDWTVIDRRLAKLPERVPGYAEALRTAVAEGRPPAIRQVQRGVEQAAQIEQLFLDM CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VSGATVAPALRADLDRHAAAAAEAYRGLGRVLREDIAPYARERDAFGRDAYRLMSRSFLG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC TEVDLDETYAWGLEHLNAIVAEQETVAERLYPGAGVAETIRRLDEEPRYQVHGTDALQAW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCHHHHHH MQDLSDRVVDALADTHFDIDPALRNLECRIAPTHTGGIYYTGPSEDLTRPGRMWWSVPPG HHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCCCEEEECCCHHCCCCCCEEECCCCC KQTFHTWQETTTVFHEGVPGHHLQIGRAVVLADRLNRWRRLGCWVSGHGEGWALYAERLM CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH AELGWLDDDGARMGMLDAQGFRAARVAIDIGVHCELTAPDGGTWDADRAWDLLAAHCAQS HHHCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHCC EKTRRFELDRYLGWPGQAPSYAVGQRIWEQLRETMLARSMTLKDFHSRALDLGGLPLDVL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RSALVGELA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA