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The map label for this gene is 108799192

Identifier: 108799192

GI number: 108799192

Start: 2364056

End: 2364778

Strand: Reverse

Name: 108799192

Synonym: Mmcs_2225

Alternate gene names: NA

Gene position: 2364778-2364056 (Counterclockwise)

Preceding gene: 108799193

Following gene: 108799191

Centisome position: 41.45

GC content: 68.74

Gene sequence:

>723_bases
ATGGCTGATCCCATCGCTCACCCTGTCCGCCTCGACGACCTCATCAACGCCATCAAGACCGTCCACGACGAACCGCTCGA
CCAACTCACCGACGCCGTTCTTGCCGCGGAGGCGCTCGGTGAGGTCGCCGACCACCTGATCGGCCACTTCGTCGACCAGG
CGCGACGCTCCGGCGCCTCCTGGACCGACATCGGCAAGTGCATGGGCGTGACCAAACAGGCCGCCCAGAAGCGCTTCGTC
CCCAAGGCGGACACCGAACCGCTCGACCCGAACCAGGGATTCGCCCGTTTCACCCCGCGTGCGCGCGCCGCGGTGGTGCA
CGCACAGAACACCGCCCGCGAGGCCCGCCACAGCGAGATCACCCCCGATCATCTGCTGCTCGGCCTGCTCGTCGACACCG
AATCACTCGGGGTCGCGTTGCTCACCGCACAGGGCGTCGCACCGCAGGACGTCCGCGCCGCCGTGGCCCTGACACCCTCG
GCCGACGGACCCGCCCTGGACCTGGTCCCGTTCAGCGGTCCCGCCAAGAAGGTGCTCGAATTGACCTTTCGCGAGGCCCT
GCGACTCGGGCACAACTACATCGGCACCGAACACCTGCTGCTGGCGCTGCTGGAGTCCGAGGACACCGACGGACCCCTGA
GCCGCCTGGGCGTCGACCGGCAGCGGGCGCAGACCGATCTCATCGGCCTGCTCGATTCGATCACCGGCGCCGGAACGGAC
TGA

Upstream 100 bases:

>100_bases
TCCTCGAGCGCGCGGTGCGACGAGGCTACGTCCGCAGCTAAACCCCGTTCAGCGTCAACCGATAGTTGACGACCATCTTT
CGTCAACTTAAAGTTGACGC

Downstream 100 bases:

>100_bases
TCTCACGTCAGGCCCGCCGCCGGCGTCTACAGGATGTGAGGATGCGACCGTTCGAAGACGTGGTGGCCGAACACGGGCCC
GTCGTGCTGCGGGTCTGCCG

Product: Clp, N terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MADPIAHPVRLDDLINAIKTVHDEPLDQLTDAVLAAEALGEVADHLIGHFVDQARRSGASWTDIGKCMGVTKQAAQKRFV
PKADTEPLDPNQGFARFTPRARAAVVHAQNTAREARHSEITPDHLLLGLLVDTESLGVALLTAQGVAPQDVRAAVALTPS
ADGPALDLVPFSGPAKKVLELTFREALRLGHNYIGTEHLLLALLESEDTDGPLSRLGVDRQRAQTDLIGLLDSITGAGTD

Sequences:

>Translated_240_residues
MADPIAHPVRLDDLINAIKTVHDEPLDQLTDAVLAAEALGEVADHLIGHFVDQARRSGASWTDIGKCMGVTKQAAQKRFV
PKADTEPLDPNQGFARFTPRARAAVVHAQNTAREARHSEITPDHLLLGLLVDTESLGVALLTAQGVAPQDVRAAVALTPS
ADGPALDLVPFSGPAKKVLELTFREALRLGHNYIGTEHLLLALLESEDTDGPLSRLGVDRQRAQTDLIGLLDSITGAGTD
>Mature_239_residues
ADPIAHPVRLDDLINAIKTVHDEPLDQLTDAVLAAEALGEVADHLIGHFVDQARRSGASWTDIGKCMGVTKQAAQKRFVP
KADTEPLDPNQGFARFTPRARAAVVHAQNTAREARHSEITPDHLLLGLLVDTESLGVALLTAQGVAPQDVRAAVALTPSA
DGPALDLVPFSGPAKKVLELTFREALRLGHNYIGTEHLLLALLESEDTDGPLSRLGVDRQRAQTDLIGLLDSITGAGTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family. ClpC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004176
- InterPro:   IPR023150 [H]

Pfam domain/function: PF02861 Clp_N [H]

EC number: NA

Molecular weight: Translated: 25582; Mature: 25451

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPIAHPVRLDDLINAIKTVHDEPLDQLTDAVLAAEALGEVADHLIGHFVDQARRSGAS
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WTDIGKCMGVTKQAAQKRFVPKADTEPLDPNQGFARFTPRARAAVVHAQNTAREARHSEI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHHEEHHHHHHHHHHHCCC
TPDHLLLGLLVDTESLGVALLTAQGVAPQDVRAAVALTPSADGPALDLVPFSGPAKKVLE
CHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHEEEEECCCCCCCEEEEEECCCHHHHHHH
LTFREALRLGHNYIGTEHLLLALLESEDTDGPLSRLGVDRQRAQTDLIGLLDSITGAGTD
HHHHHHHHHCCHHCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ADPIAHPVRLDDLINAIKTVHDEPLDQLTDAVLAAEALGEVADHLIGHFVDQARRSGAS
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WTDIGKCMGVTKQAAQKRFVPKADTEPLDPNQGFARFTPRARAAVVHAQNTAREARHSEI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHHEEHHHHHHHHHHHCCC
TPDHLLLGLLVDTESLGVALLTAQGVAPQDVRAAVALTPSADGPALDLVPFSGPAKKVLE
CHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHEEEEECCCCCCCEEEEEECCCHHHHHHH
LTFREALRLGHNYIGTEHLLLALLESEDTDGPLSRLGVDRQRAQTDLIGLLDSITGAGTD
HHHHHHHHHCCHHCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]