| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799059
Identifier: 108799059
GI number: 108799059
Start: 2242561
End: 2243142
Strand: Reverse
Name: 108799059
Synonym: Mmcs_2092
Alternate gene names: NA
Gene position: 2243142-2242561 (Counterclockwise)
Preceding gene: 108799064
Following gene: 108799058
Centisome position: 39.32
GC content: 65.98
Gene sequence:
>582_bases ATGGCCGCCAAGCTGAGAGTGCTCTCGGCGTTGTGTGCGCTGTTCGCGGCGGTCATGGTGGTGATCGCGACCAACCCGAC GGGTGAATCGGCCACCGGCCGGGTCGACCTGCGCTCGACGTTCCTGCCGCTGACCGGATCGACGACCATCAAGTACCCGG TGGTCGAAACCGTCGACCCGTCACCGTTCGACCCGTGCCGCGACATCCCGTTCGACGTCGTCCAGCGGGCCGGCCTGGCC TACACGCCGCCTGCCCCGGAGGACGCGCTGCGCTGCAAGTACGACGCGGGCAACTACCAGATGACCATCGAGGCATTCGT CTGGCGGACCTACGAGGAGACCCTGCCGCCCGACGCCGTCCAACTCGACATCGCCGGTCACCGGGCCGCGCAGTACTGGA TCATGAAGCCCACCGACTGGAACAACCGGTGGTGGACCACCTGCGCGGTCGCGTTCGACACCAGCTACGGCGTCATCCAG CAGGTGCTGTTCTACTCGCCGATCTATTCGCAGCCCGACGTCGACTGCATGCAGACCAACCTGCAGAAGGCGCACGAACT GGCGCCGCACTACATCTACTGA
Upstream 100 bases:
>100_bases TGTTCTCATTCCCGGTTCTGCGCGAGAGTGCGGACGGTTACACTCCCCTTCCAGGGTCGGATCACGACGGCGGCGCTCCG CCAGAATCACAGGGGGTGAC
Downstream 100 bases:
>100_bases CACATCTACCGAAGGGCGGCCGGGGTCCGCTGACTACCCTTGGCCGGATGACGTCAACCGGTCCCGCGGTATTGCGCCGT TCCGTCGGCAACGCAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAAKLRVLSALCALFAAVMVVIATNPTGESATGRVDLRSTFLPLTGSTTIKYPVVETVDPSPFDPCRDIPFDVVQRAGLA YTPPAPEDALRCKYDAGNYQMTIEAFVWRTYEETLPPDAVQLDIAGHRAAQYWIMKPTDWNNRWWTTCAVAFDTSYGVIQ QVLFYSPIYSQPDVDCMQTNLQKAHELAPHYIY
Sequences:
>Translated_193_residues MAAKLRVLSALCALFAAVMVVIATNPTGESATGRVDLRSTFLPLTGSTTIKYPVVETVDPSPFDPCRDIPFDVVQRAGLA YTPPAPEDALRCKYDAGNYQMTIEAFVWRTYEETLPPDAVQLDIAGHRAAQYWIMKPTDWNNRWWTTCAVAFDTSYGVIQ QVLFYSPIYSQPDVDCMQTNLQKAHELAPHYIY >Mature_192_residues AAKLRVLSALCALFAAVMVVIATNPTGESATGRVDLRSTFLPLTGSTTIKYPVVETVDPSPFDPCRDIPFDVVQRAGLAY TPPAPEDALRCKYDAGNYQMTIEAFVWRTYEETLPPDAVQLDIAGHRAAQYWIMKPTDWNNRWWTTCAVAFDTSYGVIQQ VLFYSPIYSQPDVDCMQTNLQKAHELAPHYIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21649; Mature: 21518
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKLRVLSALCALFAAVMVVIATNPTGESATGRVDLRSTFLPLTGSTTIKYPVVETVDP CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEEEECCCCCEEEECEEECCCC SPFDPCRDIPFDVVQRAGLAYTPPAPEDALRCKYDAGNYQMTIEAFVWRTYEETLPPDAV CCCCCCCCCCHHHHHHCCCCCCCCCCCHHEEEEECCCCEEEEEHHEEEHHHHHHCCCCEE QLDIAGHRAAQYWIMKPTDWNNRWWTTCAVAFDTSYGVIQQVLFYSPIYSQPDVDCMQTN EEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHH LQKAHELAPHYIY HHHHHHCCCCCCC >Mature Secondary Structure AAKLRVLSALCALFAAVMVVIATNPTGESATGRVDLRSTFLPLTGSTTIKYPVVETVDP CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEEEECCCCCEEEECEEECCCC SPFDPCRDIPFDVVQRAGLAYTPPAPEDALRCKYDAGNYQMTIEAFVWRTYEETLPPDAV CCCCCCCCCCHHHHHHCCCCCCCCCCCHHEEEEECCCCEEEEEHHEEEHHHHHHCCCCEE QLDIAGHRAAQYWIMKPTDWNNRWWTTCAVAFDTSYGVIQQVLFYSPIYSQPDVDCMQTN EEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHH LQKAHELAPHYIY HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA