| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108798863
Identifier: 108798863
GI number: 108798863
Start: 2038900
End: 2040108
Strand: Reverse
Name: 108798863
Synonym: Mmcs_1895
Alternate gene names: NA
Gene position: 2040108-2038900 (Counterclockwise)
Preceding gene: 108798864
Following gene: 108798861
Centisome position: 35.76
GC content: 68.4
Gene sequence:
>1209_bases ATGGCGTTCGGCGACGGTCCCGACGACACGGCGCTCGATGCGGCGTGGGCGGCGTTCTGCGACCGGTTGAAAGCCGCGGG CGCGCAGGCGTTCAAGGATCACAACGCCACCTCGGGCGCACAGCGGGTCGACGCGTTGCGTTTCCTCACCCAGAACCTGG GTCAGGCCTTCGACCTGGCGCTCGAAACCGCCGACACCCGGTATCCGATCGTGCACGCCTTCTGCACCCCGCTGCGCAAA CTGGGCGGTGACAGTGCGGACTTCACCTACCACCAGGCCTGGATCGACGGGACACACACCTACCGCCTCACCGGGAACCG GGGCGGCGCACCGTTTTTCAACATCACCGTGCAGGGTCCGCGGGGTTCGGGTCCCGGCGTCCTGCACGAGCCATTCGGTG ACGTCCCGGAGGTCAACCTGTCCGGCTCCCAGCTGGCGACGGCCGCCGGCGGCGACTTCGAGCTCTACATCGGTGGACCC GAGCGCGGACCGAACTGGCTGCCGACGACACCGGGTTCGCGAAAACTGTTCATCCGTCAGGGTTTCGACCGGTGGGACGA CCGGCCGGCCGAACTGCGCATCGAACGCGTCGACATGGCGGCCCCGCGGCCACTGCCCACACCCGCCGAGATGGTGGCCG CCATCGATTGGGCCGGTGACTTCGTCGAAGGGGTGATGCGCGACTGGCCGGACTACCCGTTCACCTACGGCGGCGTCGAC GCCGCGCACCCCAACCGGTTTCCCGCCGTCGACTCCGACACCGGTGACGACAAGAGGGGCCGCGCGGCGGCGAACATGTT CTGGGAACTCGGCGCCGACGAAGCGCTGATCATCGAGTTCGACGCGCACGAGGGCCTGTGGATGCTCACCAACATGGGCG TGTTCTTCAACAGCATGGACTACCTGTACCGGCCCGTCTCCTACACCCCGAGCCGCACGGTGACCGACGGTGACGGGCGG ATCCGCATCGTGCTGGCCCACGACGATCCGGGCTGTCACAACTGGCTCGACACCCAGGGATTCAGCCGCGGCAACGTCAC CTACCGGCACATGCTGGCCGGAAAGCCCGCCGTGCTGCACACCAGGCTGGTGGCCCGGTCCGACCTCGCCGACGCGCTAC CGTCGGACACCGCCACCGTCACCGGCGAGCAACGCGTCGCCCAGATGTGGGCCCGGTTCAACGGGATCCGACGACGCCAC CGGATGTGA
Upstream 100 bases:
>100_bases TCGAGCTGATCGGGCCGCGGATCGAGGCCGAGGGCCGCGCGGTCGCGGCGCGACGGGCGTGCGAGATCGTCAGCGCGATG CTCGACCGGCTGGTGCGGTG
Downstream 100 bases:
>100_bases GCCGTCAACTGCAGGCGGCGAGCACCAGTTCGCGCACCCGCGCCGCGTCGGCCTGACCCTTGGTCGCCTTCATCACCGCA CCGACGATCGCGCCTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MAFGDGPDDTALDAAWAAFCDRLKAAGAQAFKDHNATSGAQRVDALRFLTQNLGQAFDLALETADTRYPIVHAFCTPLRK LGGDSADFTYHQAWIDGTHTYRLTGNRGGAPFFNITVQGPRGSGPGVLHEPFGDVPEVNLSGSQLATAAGGDFELYIGGP ERGPNWLPTTPGSRKLFIRQGFDRWDDRPAELRIERVDMAAPRPLPTPAEMVAAIDWAGDFVEGVMRDWPDYPFTYGGVD AAHPNRFPAVDSDTGDDKRGRAAANMFWELGADEALIIEFDAHEGLWMLTNMGVFFNSMDYLYRPVSYTPSRTVTDGDGR IRIVLAHDDPGCHNWLDTQGFSRGNVTYRHMLAGKPAVLHTRLVARSDLADALPSDTATVTGEQRVAQMWARFNGIRRRH RM
Sequences:
>Translated_402_residues MAFGDGPDDTALDAAWAAFCDRLKAAGAQAFKDHNATSGAQRVDALRFLTQNLGQAFDLALETADTRYPIVHAFCTPLRK LGGDSADFTYHQAWIDGTHTYRLTGNRGGAPFFNITVQGPRGSGPGVLHEPFGDVPEVNLSGSQLATAAGGDFELYIGGP ERGPNWLPTTPGSRKLFIRQGFDRWDDRPAELRIERVDMAAPRPLPTPAEMVAAIDWAGDFVEGVMRDWPDYPFTYGGVD AAHPNRFPAVDSDTGDDKRGRAAANMFWELGADEALIIEFDAHEGLWMLTNMGVFFNSMDYLYRPVSYTPSRTVTDGDGR IRIVLAHDDPGCHNWLDTQGFSRGNVTYRHMLAGKPAVLHTRLVARSDLADALPSDTATVTGEQRVAQMWARFNGIRRRH RM >Mature_401_residues AFGDGPDDTALDAAWAAFCDRLKAAGAQAFKDHNATSGAQRVDALRFLTQNLGQAFDLALETADTRYPIVHAFCTPLRKL GGDSADFTYHQAWIDGTHTYRLTGNRGGAPFFNITVQGPRGSGPGVLHEPFGDVPEVNLSGSQLATAAGGDFELYIGGPE RGPNWLPTTPGSRKLFIRQGFDRWDDRPAELRIERVDMAAPRPLPTPAEMVAAIDWAGDFVEGVMRDWPDYPFTYGGVDA AHPNRFPAVDSDTGDDKRGRAAANMFWELGADEALIIEFDAHEGLWMLTNMGVFFNSMDYLYRPVSYTPSRTVTDGDGRI RIVLAHDDPGCHNWLDTQGFSRGNVTYRHMLAGKPAVLHTRLVARSDLADALPSDTATVTGEQRVAQMWARFNGIRRRHR M
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44274; Mature: 44143
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFGDGPDDTALDAAWAAFCDRLKAAGAQAFKDHNATSGAQRVDALRFLTQNLGQAFDLA CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LETADTRYPIVHAFCTPLRKLGGDSADFTYHQAWIDGTHTYRLTGNRGGAPFFNITVQGP HHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEECC RGSGPGVLHEPFGDVPEVNLSGSQLATAAGGDFELYIGGPERGPNWLPTTPGSRKLFIRQ CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEC GFDRWDDRPAELRIERVDMAAPRPLPTPAEMVAAIDWAGDFVEGVMRDWPDYPFTYGGVD CCCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AAHPNRFPAVDSDTGDDKRGRAAANMFWELGADEALIIEFDAHEGLWMLTNMGVFFNSMD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCHHHCCHH YLYRPVSYTPSRTVTDGDGRIRIVLAHDDPGCHNWLDTQGFSRGNVTYRHMLAGKPAVLH HHCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH TRLVARSDLADALPSDTATVTGEQRVAQMWARFNGIRRRHRM HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AFGDGPDDTALDAAWAAFCDRLKAAGAQAFKDHNATSGAQRVDALRFLTQNLGQAFDLA CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LETADTRYPIVHAFCTPLRKLGGDSADFTYHQAWIDGTHTYRLTGNRGGAPFFNITVQGP HHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEECC RGSGPGVLHEPFGDVPEVNLSGSQLATAAGGDFELYIGGPERGPNWLPTTPGSRKLFIRQ CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEC GFDRWDDRPAELRIERVDMAAPRPLPTPAEMVAAIDWAGDFVEGVMRDWPDYPFTYGGVD CCCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AAHPNRFPAVDSDTGDDKRGRAAANMFWELGADEALIIEFDAHEGLWMLTNMGVFFNSMD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCHHHCCHH YLYRPVSYTPSRTVTDGDGRIRIVLAHDDPGCHNWLDTQGFSRGNVTYRHMLAGKPAVLH HHCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH TRLVARSDLADALPSDTATVTGEQRVAQMWARFNGIRRRHRM HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA