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The map label for this gene is 108798456

Identifier: 108798456

GI number: 108798456

Start: 1620083

End: 1620700

Strand: Direct

Name: 108798456

Synonym: Mmcs_1486

Alternate gene names: NA

Gene position: 1620083-1620700 (Clockwise)

Preceding gene: 108798455

Following gene: 108798458

Centisome position: 28.4

GC content: 62.14

Gene sequence:

>618_bases
ATGCGTAGTCGCGGCTGGGCGGGTGTCACACCCACCTCGGACGAAGAGGCCATTGGTCGGATCCTGGATGCGGTTGACGA
AGTGGTCGCCGAACACGGATCAGCGATACGTCTTGCCGACGTCGCCCGCAGGCTCGGAGTGACCCGCCAGACTGTCTACC
GCTACTTCCCCAATGCCGACGCGCTGCTCATGGCCAGCGCAATGCGTGCGGTCGACGGATTCATCGACCAGGTCGTGGAC
TACGTCAGGGGAGTCAACGACCCGGTGACCGCGATCGTCGAAAGCGTGTCGTTCGGCATTGAAATCCTCGCTGGTGATCC
GCAGTTGGAGAATCTGCTGACCCGGCGCCAAGATGGCGAAGCCCTCACCTCGTTGACGTCCGACACGGCCATCACATTCT
GTTTGTCCGTCTTTCGCCGCTTCGATGTGGATTGGCGGCTTCACGGTTTCGACGACGCCGCGCTCCGTGAACTTGTGGAA
ATGACGCTCCGCAGCGTGCAATCGCTCCTGATCGACCATGGGCAGCCCCAGCGGAAAGGAAGCGAACTACGCCGCTTCCT
TGCTCGGTGGCTCGGTCCAGCCATCCTCTACCCGCGCTTATCGTCGCTGCCGACCTAG

Upstream 100 bases:

>100_bases
CCGCGTCGCGTCGGTCCGGCCCCATGGAAATCCGTGCTGGGAATGACCGGTCCGACAACACTTCCGATCGAGTTCACGAG
CGGAAGGGTTGTGACCGCGG

Downstream 100 bases:

>100_bases
CGAACAATGCCGACGCCGCTGGACCCGGCGCGAAAGGCAAAGTGGGGGAGCGGGTTCCGCTGCCGCGTCGGCTGACCGGT
GAGGCGGCTGCGGCTCAGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRSRGWAGVTPTSDEEAIGRILDAVDEVVAEHGSAIRLADVARRLGVTRQTVYRYFPNADALLMASAMRAVDGFIDQVVD
YVRGVNDPVTAIVESVSFGIEILAGDPQLENLLTRRQDGEALTSLTSDTAITFCLSVFRRFDVDWRLHGFDDAALRELVE
MTLRSVQSLLIDHGQPQRKGSELRRFLARWLGPAILYPRLSSLPT

Sequences:

>Translated_205_residues
MRSRGWAGVTPTSDEEAIGRILDAVDEVVAEHGSAIRLADVARRLGVTRQTVYRYFPNADALLMASAMRAVDGFIDQVVD
YVRGVNDPVTAIVESVSFGIEILAGDPQLENLLTRRQDGEALTSLTSDTAITFCLSVFRRFDVDWRLHGFDDAALRELVE
MTLRSVQSLLIDHGQPQRKGSELRRFLARWLGPAILYPRLSSLPT
>Mature_205_residues
MRSRGWAGVTPTSDEEAIGRILDAVDEVVAEHGSAIRLADVARRLGVTRQTVYRYFPNADALLMASAMRAVDGFIDQVVD
YVRGVNDPVTAIVESVSFGIEILAGDPQLENLLTRRQDGEALTSLTSDTAITFCLSVFRRFDVDWRLHGFDDAALRELVE
MTLRSVQSLLIDHGQPQRKGSELRRFLARWLGPAILYPRLSSLPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22787; Mature: 22787

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRGWAGVTPTSDEEAIGRILDAVDEVVAEHGSAIRLADVARRLGVTRQTVYRYFPNAD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCH
ALLMASAMRAVDGFIDQVVDYVRGVNDPVTAIVESVSFGIEILAGDPQLENLLTRRQDGE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCH
ALTSLTSDTAITFCLSVFRRFDVDWRLHGFDDAALRELVEMTLRSVQSLLIDHGQPQRKG
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SELRRFLARWLGPAILYPRLSSLPT
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSRGWAGVTPTSDEEAIGRILDAVDEVVAEHGSAIRLADVARRLGVTRQTVYRYFPNAD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCH
ALLMASAMRAVDGFIDQVVDYVRGVNDPVTAIVESVSFGIEILAGDPQLENLLTRRQDGE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCH
ALTSLTSDTAITFCLSVFRRFDVDWRLHGFDDAALRELVEMTLRSVQSLLIDHGQPQRKG
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SELRRFLARWLGPAILYPRLSSLPT
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA