| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798428
Identifier: 108798428
GI number: 108798428
Start: 1585045
End: 1585791
Strand: Direct
Name: 108798428
Synonym: Mmcs_1457
Alternate gene names: NA
Gene position: 1585045-1585791 (Clockwise)
Preceding gene: 108798426
Following gene: 108798429
Centisome position: 27.78
GC content: 60.37
Gene sequence:
>747_bases ATGGCAGATGCCGATTACGGCTTATGGCCGTTGGTGATTCTGAATACGATGTTGTTCGCGGTTTTCGGATTGAGTTTCTT TCATCCCCACGCAAAGCGCGACTGGCGAGTTATGGGAGCCTACACCGCATTCCTGGTGGCACTATTCACCGAGATGTACG GGATCCCCCTGACCGTCTATCTACTCGGCAGCTGGTTGGGATCTCGGTTCCCGCTGCTGCGCAACACTCACGCCGGCGGG CACCTGTGGAACGATCTGATCGGGTGGACCGGCGACCCGCACCTGAGCCCGTTCCATCTGGCTAGTTATGTCGCTATTGG GGGCGGCTTCTGGCTGGTCGCCGTGGGCTGGCGACATCTCCACGACGCCGCCCAAGCTGACCGACTAGCCACCACGGGAC CGTATGCTCAGGTGCGACACCCGCAGTACGACGGTTTCCTGCTGGTCATGATTGGCTTCCTGCTGCAGTGGCCAACGATT CCCACCCTGATCATGTTTCCCATCCTGGCTTGTATCTATGCGCGGCTTGCCCGCACCGAAGAACGGGCTGTGGCCAAGCA GTTCGGCCGCGAATGGCACGAGTATGCGGCGCGCACCCCTGCATTCGTTCCCAAGATGGGCCCGTGGGACCGAACGCGTC CGAGGATCGTCGACACCCAGGACCACCATGGACGAGTCGCGAGCGCTAGCTCCAATAGTGTTGACAGACAACAGAACACC TCGCAGACCGAGCGAGAACAGTCGTGA
Upstream 100 bases:
>100_bases GCGGGGGTCGCAATCGTGGCTCTTCCGATATCGGCGAGCACCACGACCCGGCCGCACGGCCGTAGCCGAAATCGGCGCCG ACCGTTGGGATGTGGGTGCG
Downstream 100 bases:
>100_bases ACAAGATACCGACCAGGCCAGGTGTTAGGGGAGCGGGCCCGGTCGCGGCAACCTCTGCGTCGATACTCAGGGCCGAAGGC ATCGAGAAGTCGTTTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-S-Isoprenylcysteine Methyltransferase; S-Isoprenylcysteine Methyltransferase; Transmembrane Protein; Heavy Metal Translocating P-Type ATPase
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MADADYGLWPLVILNTMLFAVFGLSFFHPHAKRDWRVMGAYTAFLVALFTEMYGIPLTVYLLGSWLGSRFPLLRNTHAGG HLWNDLIGWTGDPHLSPFHLASYVAIGGGFWLVAVGWRHLHDAAQADRLATTGPYAQVRHPQYDGFLLVMIGFLLQWPTI PTLIMFPILACIYARLARTEERAVAKQFGREWHEYAARTPAFVPKMGPWDRTRPRIVDTQDHHGRVASASSNSVDRQQNT SQTEREQS
Sequences:
>Translated_248_residues MADADYGLWPLVILNTMLFAVFGLSFFHPHAKRDWRVMGAYTAFLVALFTEMYGIPLTVYLLGSWLGSRFPLLRNTHAGG HLWNDLIGWTGDPHLSPFHLASYVAIGGGFWLVAVGWRHLHDAAQADRLATTGPYAQVRHPQYDGFLLVMIGFLLQWPTI PTLIMFPILACIYARLARTEERAVAKQFGREWHEYAARTPAFVPKMGPWDRTRPRIVDTQDHHGRVASASSNSVDRQQNT SQTEREQS >Mature_247_residues ADADYGLWPLVILNTMLFAVFGLSFFHPHAKRDWRVMGAYTAFLVALFTEMYGIPLTVYLLGSWLGSRFPLLRNTHAGGH LWNDLIGWTGDPHLSPFHLASYVAIGGGFWLVAVGWRHLHDAAQADRLATTGPYAQVRHPQYDGFLLVMIGFLLQWPTIP TLIMFPILACIYARLARTEERAVAKQFGREWHEYAARTPAFVPKMGPWDRTRPRIVDTQDHHGRVASASSNSVDRQQNTS QTEREQS
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28105; Mature: 27973
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADADYGLWPLVILNTMLFAVFGLSFFHPHAKRDWRVMGAYTAFLVALFTEMYGIPLTVY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH LLGSWLGSRFPLLRNTHAGGHLWNDLIGWTGDPHLSPFHLASYVAIGGGFWLVAVGWRHL HHHHHHHCCCCHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH HDAAQADRLATTGPYAQVRHPQYDGFLLVMIGFLLQWPTIPTLIMFPILACIYARLARTE HHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ERAVAKQFGREWHEYAARTPAFVPKMGPWDRTRPRIVDTQDHHGRVASASSNSVDRQQNT HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCEECCCCCCCHHHHCC SQTEREQS CHHHHCCC >Mature Secondary Structure ADADYGLWPLVILNTMLFAVFGLSFFHPHAKRDWRVMGAYTAFLVALFTEMYGIPLTVY CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH LLGSWLGSRFPLLRNTHAGGHLWNDLIGWTGDPHLSPFHLASYVAIGGGFWLVAVGWRHL HHHHHHHCCCCHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH HDAAQADRLATTGPYAQVRHPQYDGFLLVMIGFLLQWPTIPTLIMFPILACIYARLARTE HHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ERAVAKQFGREWHEYAARTPAFVPKMGPWDRTRPRIVDTQDHHGRVASASSNSVDRQQNT HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCEECCCCCCCHHHHCC SQTEREQS CHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA