Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108798407

Identifier: 108798407

GI number: 108798407

Start: 1563133

End: 1563972

Strand: Reverse

Name: 108798407

Synonym: Mmcs_1436

Alternate gene names: NA

Gene position: 1563972-1563133 (Counterclockwise)

Preceding gene: 108798409

Following gene: 108798405

Centisome position: 27.41

GC content: 64.05

Gene sequence:

>840_bases
ATGACGGCGCTAAGAATCCTCGCCGTGAGTCTGACCGCCGCCGTAGTCGCGGCATGTTCGTCGAACACGGTGGACAGCAC
GCCCGCGATAGTGCCTGGCATGGTGCATATTCATGGCCTGGGAATCAACCCCGCCGACGACCAGCTCTACGTCGCGACGC
ACTATGGCCTGTTCCGCGCAGGCGAGGATCAGGCACCGCAGCGAGTCGGCGACCTAGCACAGGACTTCATGGGCTTCACC
GTTACCGGCGGCGACGAGTTCCTAGCCAGCGGCCACCCCGATCCTGCCGACCGGTCACAACCACCGCATCTGGGTCTGAT
CAAAAGCGACGATGCCGGCCGATCATGGGAATCGCTATCGCTCAAAGGCAGCGCCGACTTCCACGCATTGGAATACCGTC
ACAACCGGATCTACGGCCATGACAGCCAATCGGGTCGGGTCATGATGAGCACCGACGAAAAGTCCTGGCAACAGCGCGCA
GAGATCGCTGCACACGACCTTGCCGTCTCGCCCGCAGACGCCAACGACATCCTCGCCACAACCCAACAGGGCCTGTTTCG
TAGCGCCGACGGCGCGATGACCTTCGGCGCCGTTGCCGGCGCTCCGGCCCTCGTCTTTGTCAGCTGGCCAGACAGCGGCC
CTCTCATCGGAGCCGACGCGCAAGGAACCCTGTACACCAGCATCGACGGCCAAACCTGGCAGCCACAGCATCGCCTCAAC
GCGACACCTCAAGCCCTCCTGGCCGCCGGCGACCGCCAGGTCTACGTCGCCACCGACACCGCCATCTACCAATCAGGCGA
TGACGGCGCCACAGTCAGCGTGCTCAGCACCGTCGACTGA

Upstream 100 bases:

>100_bases
GACGGCCTACGACGATCACCGAAACACCCAGCACTGCTGGACACCGGCAACGCCAACCTACTATGAAGCTACGTAGATCC
GTCGACGAGAGGAATCCCTT

Downstream 100 bases:

>100_bases
GGGCCCCACACCGTCTTGCCGGCGTCGTTCAAGGCACCTCACTCCATACGTTCCGACACCTAACGGAGCATGCGATAGCC
GCCGACCACCACCTCGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; BNR Repeat Domain Protein; Group-Specific Protein; BNR Repeat-Containing Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase BNR Repeat-Containing Protein; Glycosyl Hydrolase; BNR/Asp-Box Repeat Domain Protein

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRAGEDQAPQRVGDLAQDFMGFT
VTGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLSLKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRA
EIAAHDLAVSPADANDILATTQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLN
ATPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD

Sequences:

>Translated_279_residues
MTALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRAGEDQAPQRVGDLAQDFMGFT
VTGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLSLKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRA
EIAAHDLAVSPADANDILATTQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLN
ATPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD
>Mature_278_residues
TALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRAGEDQAPQRVGDLAQDFMGFTV
TGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLSLKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRAE
IAAHDLAVSPADANDILATTQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLNA
TPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29389; Mature: 29258

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEC
GEDQAPQRVGDLAQDFMGFTVTGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLS
CCCCCHHHHHHHHHHHCCEEEECCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE
LKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRAEIAAHDLAVSPADANDILAT
ECCCCCEEEEEEECCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHEEECCCCCCHHHHH
TQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLN
HHHHHHCCCCCCEEEHHHCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCHHHCC
ATPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD
CCHHHHHCCCCCEEEEEECCEEEECCCCCCEEEEEEECC
>Mature Secondary Structure 
TALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEC
GEDQAPQRVGDLAQDFMGFTVTGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLS
CCCCCHHHHHHHHHHHCCEEEECCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE
LKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRAEIAAHDLAVSPADANDILAT
ECCCCCEEEEEEECCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHEEECCCCCCHHHHH
TQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLN
HHHHHHCCCCCCEEEHHHCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCHHHCC
ATPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD
CCHHHHHCCCCCEEEEEECCEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA