| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108798396
Identifier: 108798396
GI number: 108798396
Start: 1548739
End: 1548993
Strand: Direct
Name: 108798396
Synonym: Mmcs_1425
Alternate gene names: NA
Gene position: 1548739-1548993 (Clockwise)
Preceding gene: 108798395
Following gene: 108798397
Centisome position: 27.14
GC content: 56.86
Gene sequence:
>255_bases GTGTCTGAGGAGGCCGACGGTAGCCGTCGCAACTGGCGCCATCGCGAAAAGCGTTTAAGTACAAGGACACTGGCCAAGCG CGTGAGTCCAGAGGATCACGAAGTAGTAGTTGCATATGCCAAGACCTTGCACGTCACAGTCGCTGACCTTCTCGGCCCAG CTGTCGAGGAGCTCATCTTTCAGGCTCGCGCTTTCACGGCGATGACGACTGAAGATGTGTCGGATCACGATGGTCATGAA GCTGTCGGTGGCTGA
Upstream 100 bases:
>100_bases ATCGCCGGAAGCAGTGTCCTATTGCCTCGACAGCAGAAGCGAATGGCTTGACGGAAAATGATACGAGCGTTCCGAGCTGG CGTGGTGAGGGCGGAGGCCA
Downstream 100 bases:
>100_bases ATGCGCAGTGTATATCGTTCTTGGAGTTCAAGAATCGGATACATCCCGGGAGGAGACGACTTGTTCAAGTCGGACCGAAT GGTAGCGACCGTGTCTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSEEADGSRRNWRHREKRLSTRTLAKRVSPEDHEVVVAYAKTLHVTVADLLGPAVEELIFQARAFTAMTTEDVSDHDGHE AVGG
Sequences:
>Translated_84_residues MSEEADGSRRNWRHREKRLSTRTLAKRVSPEDHEVVVAYAKTLHVTVADLLGPAVEELIFQARAFTAMTTEDVSDHDGHE AVGG >Mature_83_residues SEEADGSRRNWRHREKRLSTRTLAKRVSPEDHEVVVAYAKTLHVTVADLLGPAVEELIFQARAFTAMTTEDVSDHDGHEA VGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9356; Mature: 9225
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEADGSRRNWRHREKRLSTRTLAKRVSPEDHEVVVAYAKTLHVTVADLLGPAVEELIF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH QARAFTAMTTEDVSDHDGHEAVGG HHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SEEADGSRRNWRHREKRLSTRTLAKRVSPEDHEVVVAYAKTLHVTVADLLGPAVEELIF CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH QARAFTAMTTEDVSDHDGHEAVGG HHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA