| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798365
Identifier: 108798365
GI number: 108798365
Start: 1508398
End: 1509102
Strand: Direct
Name: 108798365
Synonym: Mmcs_1394
Alternate gene names: NA
Gene position: 1508398-1509102 (Clockwise)
Preceding gene: 108798360
Following gene: 108798367
Centisome position: 26.44
GC content: 67.38
Gene sequence:
>705_bases ATGAATTCGACGCAACCTGCAGCATCGGGAGAGCAGACGGTCACCCCGGCAACGGCAGGTGTGTCGGCCGATCATCCCGG CGTCGACGAACTGTTCGCGCTGCTCGCCTACGGTGAGGTGGCGGCGTTCTACCGGTTGACCGAGGAAGCGCGCATGGCGC CCAACCTGCGCGGACGCATCAACATGGCGAGTATGGCGGCCGCCGAGATGAACCACTACGAGTTGCTGCGCGACGCCATG GAGCGCCGCGGCGTCGACGTGGTCCCGGCGATGACGAAGTACGCCTCGGCGCTGGAGAACTACCACCGGTTGACGACGCC GAGCACGTGGCTCGAGGCACTGGTCAAGACCTATGTCGGTGATGCCCTGGCCGCCGATTTCTACAACGAGATCGCCGGTG CCCTGCCCGACCAGGTGGCCGCGGTGGTGCGCGGTGTGCTCTCCGAGACCGGACACTCGCAGTTCGTGGTCGCCGAGGTT CGTGCCGCGGTCACGGCCAGCGATCGGCAGAGGCACCGGTTGGCGCTGTGGTCGCGGCGGCTGCTCGGTGAGGCGATCAC CCAGGCGCAGTACGTCCTGGCCGACCACGACGAACTGGTCGACCTCGTGATGTCCGGCGGGGAAGGGCTGCCCCAGATGG CGGAGTTCTTCGACCGGTTGCAGCAGACCCACCACGCCCGGATGCAGGAACTCGGCCTGGCCTGA
Upstream 100 bases:
>100_bases CGGGAGCGGCTCGTCTCGAATAAGTCGCTGCCTGCGGACATCATACCCCGGATGGCTTTGCCGGGATGGATCGGCGCTCG CCGGCGATTACAGTTGGGCC
Downstream 100 bases:
>100_bases GCCGCTACTGCGTGCAGGTGGCAATCATCGAATTGTTGTTCTGGGTCACCAGCGCCGCGCCTGCGGCGTCGGTGATCGCG CAGTTGAGTTGACCCCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MNSTQPAASGEQTVTPATAGVSADHPGVDELFALLAYGEVAAFYRLTEEARMAPNLRGRINMASMAAAEMNHYELLRDAM ERRGVDVVPAMTKYASALENYHRLTTPSTWLEALVKTYVGDALAADFYNEIAGALPDQVAAVVRGVLSETGHSQFVVAEV RAAVTASDRQRHRLALWSRRLLGEAITQAQYVLADHDELVDLVMSGGEGLPQMAEFFDRLQQTHHARMQELGLA
Sequences:
>Translated_234_residues MNSTQPAASGEQTVTPATAGVSADHPGVDELFALLAYGEVAAFYRLTEEARMAPNLRGRINMASMAAAEMNHYELLRDAM ERRGVDVVPAMTKYASALENYHRLTTPSTWLEALVKTYVGDALAADFYNEIAGALPDQVAAVVRGVLSETGHSQFVVAEV RAAVTASDRQRHRLALWSRRLLGEAITQAQYVLADHDELVDLVMSGGEGLPQMAEFFDRLQQTHHARMQELGLA >Mature_234_residues MNSTQPAASGEQTVTPATAGVSADHPGVDELFALLAYGEVAAFYRLTEEARMAPNLRGRINMASMAAAEMNHYELLRDAM ERRGVDVVPAMTKYASALENYHRLTTPSTWLEALVKTYVGDALAADFYNEIAGALPDQVAAVVRGVLSETGHSQFVVAEV RAAVTASDRQRHRLALWSRRLLGEAITQAQYVLADHDELVDLVMSGGEGLPQMAEFFDRLQQTHHARMQELGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25557; Mature: 25557
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTQPAASGEQTVTPATAGVSADHPGVDELFALLAYGEVAAFYRLTEEARMAPNLRGRI CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NMASMAAAEMNHYELLRDAMERRGVDVVPAMTKYASALENYHRLTTPSTWLEALVKTYVG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DALAADFYNEIAGALPDQVAAVVRGVLSETGHSQFVVAEVRAAVTASDRQRHRLALWSRR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGEAITQAQYVLADHDELVDLVMSGGEGLPQMAEFFDRLQQTHHARMQELGLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSTQPAASGEQTVTPATAGVSADHPGVDELFALLAYGEVAAFYRLTEEARMAPNLRGRI CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NMASMAAAEMNHYELLRDAMERRGVDVVPAMTKYASALENYHRLTTPSTWLEALVKTYVG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DALAADFYNEIAGALPDQVAAVVRGVLSETGHSQFVVAEVRAAVTASDRQRHRLALWSRR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGEAITQAQYVLADHDELVDLVMSGGEGLPQMAEFFDRLQQTHHARMQELGLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA