| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108798328
Identifier: 108798328
GI number: 108798328
Start: 1471513
End: 1472013
Strand: Direct
Name: 108798328
Synonym: Mmcs_1357
Alternate gene names: NA
Gene position: 1471513-1472013 (Clockwise)
Preceding gene: 108798327
Following gene: 108798329
Centisome position: 25.79
GC content: 70.66
Gene sequence:
>501_bases ATGCGCGTCTACATCCCGGTCACCCTCGCCATGCTCGCCCAGCTCGTCGCCGACCGGTCGCTGCGCGCCGTGAACGGCAC CGCGTTCGCCGTCACGCCCACCCTGCGCGAGTCCTACGCCGAGGGTGACGACGAGGAACTGGCCGAGGTGGCGTTGCGCG ATGCGGCCCTGGCCTCCCTGCGGCTGTTGGCCGCCGACGACGGCGCGTCGAACCTGCCCCCTCGGCGTGCGGTGCTCGTC GCCGATGTCGAGGGCGCGGCGGCCCGGCCGGACCTCGACGATGCGGTGGTCCGGTTGACCGGCCCCGTGGAGTATTCGGA GGTGATCGCCGCCTACGTCGACAACGCCGACGCGGAGGGTGCGGTCAGGCTCGCCATCAATGCCGTGGACGTCGCCGATT TCGGGGACGAGGACGCCGAACTGACCGTCGGCGATGCACAGGACCACGATCTGGCGTGGTACGCCCCACAGGAACTGCCG TTCCTGCTCGACCTGCTCTAA
Upstream 100 bases:
>100_bases GCGGTGGACAGTGCGGTCATCCACGGCGTCATCGAACACGGCGACGACTTCATCATCTCGGTGGAGAAGGATCCCGACGC CAGGTAGCTAGTCTCGCGGG
Downstream 100 bases:
>100_bases AACTGGATACGGGACCGTAGGTTACGGTACCGTAGGTTCATGGCCAAGAGTCAGATCAAAGTCTCGGCCAGAGTTGCCGA CACCGTCCGTCCCCGTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MRVYIPVTLAMLAQLVADRSLRAVNGTAFAVTPTLRESYAEGDDEELAEVALRDAALASLRLLAADDGASNLPPRRAVLV ADVEGAAARPDLDDAVVRLTGPVEYSEVIAAYVDNADAEGAVRLAINAVDVADFGDEDAELTVGDAQDHDLAWYAPQELP FLLDLL
Sequences:
>Translated_166_residues MRVYIPVTLAMLAQLVADRSLRAVNGTAFAVTPTLRESYAEGDDEELAEVALRDAALASLRLLAADDGASNLPPRRAVLV ADVEGAAARPDLDDAVVRLTGPVEYSEVIAAYVDNADAEGAVRLAINAVDVADFGDEDAELTVGDAQDHDLAWYAPQELP FLLDLL >Mature_166_residues MRVYIPVTLAMLAQLVADRSLRAVNGTAFAVTPTLRESYAEGDDEELAEVALRDAALASLRLLAADDGASNLPPRRAVLV ADVEGAAARPDLDDAVVRLTGPVEYSEVIAAYVDNADAEGAVRLAINAVDVADFGDEDAELTVGDAQDHDLAWYAPQELP FLLDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17619; Mature: 17619
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVYIPVTLAMLAQLVADRSLRAVNGTAFAVTPTLRESYAEGDDEELAEVALRDAALASL CEEEEEHHHHHHHHHHHCCCCEEECCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHE RLLAADDGASNLPPRRAVLVADVEGAAARPDLDDAVVRLTGPVEYSEVIAAYVDNADAEG EEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC AVRLAINAVDVADFGDEDAELTVGDAQDHDLAWYAPQELPFLLDLL EEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEECCCCCCHHHHCC >Mature Secondary Structure MRVYIPVTLAMLAQLVADRSLRAVNGTAFAVTPTLRESYAEGDDEELAEVALRDAALASL CEEEEEHHHHHHHHHHHCCCCEEECCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHE RLLAADDGASNLPPRRAVLVADVEGAAARPDLDDAVVRLTGPVEYSEVIAAYVDNADAEG EEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC AVRLAINAVDVADFGDEDAELTVGDAQDHDLAWYAPQELPFLLDLL EEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEECCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA