| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798321
Identifier: 108798321
GI number: 108798321
Start: 1461584
End: 1462912
Strand: Reverse
Name: 108798321
Synonym: Mmcs_1350
Alternate gene names: NA
Gene position: 1462912-1461584 (Counterclockwise)
Preceding gene: 108798325
Following gene: 108798316
Centisome position: 25.64
GC content: 66.59
Gene sequence:
>1329_bases TTGGATGTACCCATGGCAGACGATGAGCGACAGTCGGCGATCGTCAATTGCCTGGAGCAGGCCTTCAAGGATCTGATGGA CGCCGACCCGGACGCATTCCGCACCAAGTTCCGCAAGATGGCGGCCGAACCGTTCGCGTTCTACCGCGGCAGCGCCTGCC TGTTCTACGCCGACGTCGCCGCCGCCGAGGACCGCTGGGCCGACGAGCGCACCAGCCGGGTCTGGATCCAGGGCGACCTG CATGCGGAGAACTTCGGCACCTACATGGACGGCGCCGGGAAGCTGATCTTCGACGTCAACGACTTCGACGAGGCCTATGT CGGCCACTTCACCTGGGACCTCAAGCGGTTCGCCGCGAGCGTGGCCCTGATGTGCTGGCAGAAGGCCCTCTCCGACGGTG AGATCACCAATCTGATCGAGACGTTCACGCGCGCCTACCTCGAGCAGGTGCAGTGGTTCCGGCAGGTCGACGACGATTCG TCGTTCTCGCTCAACCTCGACACCGCGCGCGGTGCGGTGCTGTCCGCCCTGCAGTCGGCGCTCCTGTCCACCCGCTCGGA GATGCTCGACCGGATGACCAAGGTCGACAACTCAGAACGCACGTTCCGCGACGGCGCCGGGGTCCGCCGACTCGACGACG CCGAGCGGGCGAAGGTGCAGGACGCCTTCGACCGCTACCTCACCACGATCCCGGAGGCCAAGCGATTCCACGGCATCGCC TATGACATCAAGGACGTGGTCGGCAAGGCCGGCCACGGCATCGGCAGCGCCGGGCTGCCGACCTACACGATCCTCATCGA GGGGTTCAACCAGGCGCTGGACAACGACGTGGTGCTGTCGATGAAACAGGGCAACGTCGCCGCCCCGAGCCGGGTCGTCG GCGACCACGCCGTCCACGACTACTTCGAACACCACGGGCACCGGACCGCGGTGTCACAACGCGCGCTGCAGGCGCATGCC GACCCGCTGCTCGGCTACACCGACGTCGACGGCGTGGGCTTCGTCGTCAGCGAGCTCTCCCCCTACGAGTCTGATCTGGA ATGGGACGAGCTGACCGAGCCGGACGAACTGGGCGAGGTGATCACGCAGCTCGGTCGGGCGGTGGCCAAGGTGCACTGCG TCGGCGACAGCGACAGCGACCAGTCGCTGGTGCAATTCCAGACCGAGGACGCAATCATGACGGTCATCGGCGAGCGTGCC GACGAGTTCGTCGCCGACATCGTCGAATTCGGCCTGGACTACGCGGCGCAGGTCCGCGACGACCACCGGCTGTTCGTCGA CGCCTTCCGCGAGGGACGCATCCCCGGGGTCACCTCGACGCTGCGCTGA
Upstream 100 bases:
>100_bases GCATTCGAGCGGGAGGACGAGGTCGAGCATGGTCGCAGTGTCGGCGCAGGGTGTGACAGCCGGAATCGTGCAGTCCGGTG CGCCGATCGCCCGTCCGGCG
Downstream 100 bases:
>100_bases AGGGTGCTCAGCCCGGCAGCACGGGGATCGTGCCTGCGACCATCAGCGGACGCACCTCGGTCCAGGTGGGGTCGCCCTCG GCGGTCGACGGCGACAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MDVPMADDERQSAIVNCLEQAFKDLMDADPDAFRTKFRKMAAEPFAFYRGSACLFYADVAAAEDRWADERTSRVWIQGDL HAENFGTYMDGAGKLIFDVNDFDEAYVGHFTWDLKRFAASVALMCWQKALSDGEITNLIETFTRAYLEQVQWFRQVDDDS SFSLNLDTARGAVLSALQSALLSTRSEMLDRMTKVDNSERTFRDGAGVRRLDDAERAKVQDAFDRYLTTIPEAKRFHGIA YDIKDVVGKAGHGIGSAGLPTYTILIEGFNQALDNDVVLSMKQGNVAAPSRVVGDHAVHDYFEHHGHRTAVSQRALQAHA DPLLGYTDVDGVGFVVSELSPYESDLEWDELTEPDELGEVITQLGRAVAKVHCVGDSDSDQSLVQFQTEDAIMTVIGERA DEFVADIVEFGLDYAAQVRDDHRLFVDAFREGRIPGVTSTLR
Sequences:
>Translated_442_residues MDVPMADDERQSAIVNCLEQAFKDLMDADPDAFRTKFRKMAAEPFAFYRGSACLFYADVAAAEDRWADERTSRVWIQGDL HAENFGTYMDGAGKLIFDVNDFDEAYVGHFTWDLKRFAASVALMCWQKALSDGEITNLIETFTRAYLEQVQWFRQVDDDS SFSLNLDTARGAVLSALQSALLSTRSEMLDRMTKVDNSERTFRDGAGVRRLDDAERAKVQDAFDRYLTTIPEAKRFHGIA YDIKDVVGKAGHGIGSAGLPTYTILIEGFNQALDNDVVLSMKQGNVAAPSRVVGDHAVHDYFEHHGHRTAVSQRALQAHA DPLLGYTDVDGVGFVVSELSPYESDLEWDELTEPDELGEVITQLGRAVAKVHCVGDSDSDQSLVQFQTEDAIMTVIGERA DEFVADIVEFGLDYAAQVRDDHRLFVDAFREGRIPGVTSTLR >Mature_442_residues MDVPMADDERQSAIVNCLEQAFKDLMDADPDAFRTKFRKMAAEPFAFYRGSACLFYADVAAAEDRWADERTSRVWIQGDL HAENFGTYMDGAGKLIFDVNDFDEAYVGHFTWDLKRFAASVALMCWQKALSDGEITNLIETFTRAYLEQVQWFRQVDDDS SFSLNLDTARGAVLSALQSALLSTRSEMLDRMTKVDNSERTFRDGAGVRRLDDAERAKVQDAFDRYLTTIPEAKRFHGIA YDIKDVVGKAGHGIGSAGLPTYTILIEGFNQALDNDVVLSMKQGNVAAPSRVVGDHAVHDYFEHHGHRTAVSQRALQAHA DPLLGYTDVDGVGFVVSELSPYESDLEWDELTEPDELGEVITQLGRAVAKVHCVGDSDSDQSLVQFQTEDAIMTVIGERA DEFVADIVEFGLDYAAQVRDDHRLFVDAFREGRIPGVTSTLR
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49289; Mature: 49289
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVPMADDERQSAIVNCLEQAFKDLMDADPDAFRTKFRKMAAEPFAFYRGSACLFYADVA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCEEEEEEHHH AAEDRWADERTSRVWIQGDLHAENFGTYMDGAGKLIFDVNDFDEAYVGHFTWDLKRFAAS HHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH VALMCWQKALSDGEITNLIETFTRAYLEQVQWFRQVDDDSSFSLNLDTARGAVLSALQSA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHH LLSTRSEMLDRMTKVDNSERTFRDGAGVRRLDDAERAKVQDAFDRYLTTIPEAKRFHGIA HHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHH YDIKDVVGKAGHGIGSAGLPTYTILIEGFNQALDNDVVLSMKQGNVAAPSRVVGDHAVHD HHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH YFEHHGHRTAVSQRALQAHADPLLGYTDVDGVGFVVSELSPYESDLEWDELTEPDELGEV HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCHHHHHHH ITQLGRAVAKVHCVGDSDSDQSLVQFQTEDAIMTVIGERADEFVADIVEFGLDYAAQVRD HHHHHHHHHEEEECCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC DHRLFVDAFREGRIPGVTSTLR CHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDVPMADDERQSAIVNCLEQAFKDLMDADPDAFRTKFRKMAAEPFAFYRGSACLFYADVA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCEEEEEEHHH AAEDRWADERTSRVWIQGDLHAENFGTYMDGAGKLIFDVNDFDEAYVGHFTWDLKRFAAS HHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH VALMCWQKALSDGEITNLIETFTRAYLEQVQWFRQVDDDSSFSLNLDTARGAVLSALQSA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHH LLSTRSEMLDRMTKVDNSERTFRDGAGVRRLDDAERAKVQDAFDRYLTTIPEAKRFHGIA HHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHH YDIKDVVGKAGHGIGSAGLPTYTILIEGFNQALDNDVVLSMKQGNVAAPSRVVGDHAVHD HHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH YFEHHGHRTAVSQRALQAHADPLLGYTDVDGVGFVVSELSPYESDLEWDELTEPDELGEV HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCHHHHHHH ITQLGRAVAKVHCVGDSDSDQSLVQFQTEDAIMTVIGERADEFVADIVEFGLDYAAQVRD HHHHHHHHHEEEECCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC DHRLFVDAFREGRIPGVTSTLR CHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA