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The map label for this gene is 108798306

Identifier: 108798306

GI number: 108798306

Start: 1442618

End: 1443325

Strand: Direct

Name: 108798306

Synonym: Mmcs_1335

Alternate gene names: NA

Gene position: 1442618-1443325 (Clockwise)

Preceding gene: 108798305

Following gene: 108798307

Centisome position: 25.28

GC content: 68.22

Gene sequence:

>708_bases
TTGACCGCTGCGACCGGGGCGAGCGAAGCGACGGGAAAGGCTAGTCTTCCGCGTGTGAGCAGCCCGCGCGACCGCCGCGT
CCCCTACGCCGAGGCGTCGAGGGTGCTGCTGCGCGACTCGATCCTCGACGGGATGCGCGACCTGCTGCGCAGCCGGGACT
GGTCGTCGATCACGCTGACCGATGTGGCCAAGGCCGCCGGGATCAGCCGTCAGACCATCTACAACGAATTCGGCTCCCGG
CACGGGCTGGCCCAGGGATATGCCCTGCGCCTGGCGGACCGTCTCGTCGACGCGGTGGACGAGGCGATCGAAGGCAACGT
CGGCGAGGTGTACGCCGCCTTCCTGGAGGGGTTCCGCGCGTTCTTCACCGAATCCGCCGCCGATCCGCTGGTGATCTCGC
TGCTGTCGGGGGACACCAAACCGGACCTGCTGCAGATCATCACCACCGACAGCGGCCCGATCATCACCCGCTGCTCGGAC
CGGTTGACGTCGACCTTCCGGAACAGCTGGGTCAAGGCCAGCGACGAGGACGCCGGAATCCTGGCCCGGGCGATCGTGCG
CCTGGCGATGAGTTACGTCTCCATGCCGCCGGAGGCCGACCACGATGTGGCCGGTGACCTGGCCCGGCTGATGACTCCCT
TCGCGGAGCGCTACGGTGTTATCGAGCAGGATCCGCGGCTGGCGAAGACGCACCGCCCCGATCGCTAA

Upstream 100 bases:

>100_bases
TCGCGCCGGGCACCCGCTGGGACGACATCCCCGACGACTGGAGCTGCCCGGACTGCGGCGCGGCGAAGTCGGACTTCGAG
ATGGTGGAGGTCGCGCGGGG

Downstream 100 bases:

>100_bases
TCTGACACTCAGCTAAGTAAATGCGACGCGCGCACGAGAAGGAAACACATGACCACGACTGAGCAGCGACTGACGGTCGA
GAGCCGCAACGGCATCGACT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTAATGASEATGKASLPRVSSPRDRRVPYAEASRVLLRDSILDGMRDLLRSRDWSSITLTDVAKAAGISRQTIYNEFGSR
HGLAQGYALRLADRLVDAVDEAIEGNVGEVYAAFLEGFRAFFTESAADPLVISLLSGDTKPDLLQIITTDSGPIITRCSD
RLTSTFRNSWVKASDEDAGILARAIVRLAMSYVSMPPEADHDVAGDLARLMTPFAERYGVIEQDPRLAKTHRPDR

Sequences:

>Translated_235_residues
MTAATGASEATGKASLPRVSSPRDRRVPYAEASRVLLRDSILDGMRDLLRSRDWSSITLTDVAKAAGISRQTIYNEFGSR
HGLAQGYALRLADRLVDAVDEAIEGNVGEVYAAFLEGFRAFFTESAADPLVISLLSGDTKPDLLQIITTDSGPIITRCSD
RLTSTFRNSWVKASDEDAGILARAIVRLAMSYVSMPPEADHDVAGDLARLMTPFAERYGVIEQDPRLAKTHRPDR
>Mature_234_residues
TAATGASEATGKASLPRVSSPRDRRVPYAEASRVLLRDSILDGMRDLLRSRDWSSITLTDVAKAAGISRQTIYNEFGSRH
GLAQGYALRLADRLVDAVDEAIEGNVGEVYAAFLEGFRAFFTESAADPLVISLLSGDTKPDLLQIITTDSGPIITRCSDR
LTSTFRNSWVKASDEDAGILARAIVRLAMSYVSMPPEADHDVAGDLARLMTPFAERYGVIEQDPRLAKTHRPDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25644; Mature: 25513

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAATGASEATGKASLPRVSSPRDRRVPYAEASRVLLRDSILDGMRDLLRSRDWSSITLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
DVAKAAGISRQTIYNEFGSRHGLAQGYALRLADRLVDAVDEAIEGNVGEVYAAFLEGFRA
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FFTESAADPLVISLLSGDTKPDLLQIITTDSGPIITRCSDRLTSTFRNSWVKASDEDAGI
HHHHCCCCHHEEHHHCCCCCCHHEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHH
LARAIVRLAMSYVSMPPEADHDVAGDLARLMTPFAERYGVIEQDPRLAKTHRPDR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
TAATGASEATGKASLPRVSSPRDRRVPYAEASRVLLRDSILDGMRDLLRSRDWSSITLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
DVAKAAGISRQTIYNEFGSRHGLAQGYALRLADRLVDAVDEAIEGNVGEVYAAFLEGFRA
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FFTESAADPLVISLLSGDTKPDLLQIITTDSGPIITRCSDRLTSTFRNSWVKASDEDAGI
HHHHCCCCHHEEHHHCCCCCCHHEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHH
LARAIVRLAMSYVSMPPEADHDVAGDLARLMTPFAERYGVIEQDPRLAKTHRPDR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA