| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is rfbP [H]
Identifier: 108798272
GI number: 108798272
Start: 1405712
End: 1407136
Strand: Reverse
Name: rfbP [H]
Synonym: Mmcs_1301
Alternate gene names: 108798272
Gene position: 1407136-1405712 (Counterclockwise)
Preceding gene: 108798273
Following gene: 108798268
Centisome position: 24.66
GC content: 68.7
Gene sequence:
>1425_bases ATGCGTGACAGCAGCGCCAGAGTGCAGGCCGCCGAAATACTCAGTGTGCTCGGCGGAACCACGTTCGCGGTCGCGGTCAG CTCCGACGTCGCCGTGCACCGGGAGACCTGGGTACGCGTCATCTTCGGTGTCGGCATGGTGGCGGCGTGGGCGGTGTTGC TGACCGCGCAGAGATCCAGCGACCCGAAGATCCTGGGCCGCGGATTCGAGGAGTACAAGCGCGTCCTGGTGGCCACCGGC AAGCTCCTCGGCCTCGTCGCCGTGGTCCTCCTGGTCACGGGCAGCCCGCTACCGCGCCAGACCCTGCTGATCGCGATCGC CACGGGCCTCGGCGGATGCATGCTGGCGCATCTGGTGAGCACCGTCGTCCTCGTCCGGCAGCGGATCCACCCGGACGGGC AGCGCACCCGCCTGCTCCTGGTCGGCACCCGCGCCGAGGCGGACCGCGTCGCGGCCGCGGTGGCCGAGGACGCGCGTGCG GGCTACGAGGTCGTGGCTTTCCACGCACTGGGTGCCCACTCGAACGAATTGGTCAGCGTCACAGGTGGATCCGAGGTACC CGGCGAGATCCCCGAGGAACCGGTGGTGGACACCGCCGAGATCACGGAGTTGGCCAGGGTGCATCAAGCGCAGTCGGTGG TCATCAGCTCCGCCGACCGCTTGAGCGACGAGTGCCTGCGCGATCTGCGGTGGGCGCTGCATCCGTACGGCGTCGACCTG ATGGTGGTGCCGGGCGTGGCCGCGGTCGCCCAGCCGAAGCTCAGTCTGGAACGGCTGAACGGACTTTCGCTGCTACGGGT GGACGAACCGGGTTACTCGTCGTTGTCCGCACTGGGCAAGGCACTGTTCGACCGCCTTCTGTCGCTGGTCCTGCTGGTGG TGGCCGCACCCCTGTTCGTGGTGGTCGCCGCCCTGATCAAGCTGGAGGACGGTGGTCCGGTGTTCTACCGGCCCGCCCGC GTCGGGCGGCACGGAGAACCCTTCCGGATGTGGAAGTTCCGGTCGATGCAGCCCGAGGCCGACGCACGCCTGGCCGAGGT GCGCGCACTGTCCGGCAAGTCCGGCGACGCGTTCTACAAGTGGGCAGAAGACCCACGGGTCACCCGGATCGGCAGGGCGC TGCGCCGCACCAGCCTCGATGAACTGCCCCAGCTCATCAACGTCGTCGTCGGTGAGATGAGCCTGATCGGACCCCGGCCG ATGGTCGACGGCGAGGGCGCCGAGTTTCCCGGGTTCGTCGAGCGCCGACTCCTGGTGAAACCGGGGATGACCGGTCTGTG GCAGGTGTCGGGCCGTTCGGACATCAGCGAACAGGACCGCGTCCGGCTCGACCTGTACTACGTGGAGAACTGGTCGATGG ATCAGGACCTGCGAATCCTGGCCAGGACCGCGATGACCGTGGCCCGCGGCCGCGGCGCCTACTGA
Upstream 100 bases:
>100_bases CCCGAGGTCACGAGCTGGAATTCGTCGGTGGGACTCGCCGGCCGCGTGGTGCGCGAGGTGATCGACAACCGCGAGTCGGC CAGGCGCCGGACGGTGGCCA
Downstream 100 bases:
>100_bases CCGTGACGGCTCAGCGCAGCAGCGCCCGCGACATCACAACGCGCTGAATCTGATTCGTGCCCTCGTAGATCTGGGTGATC TTGGCGTCACGCATCATCCG
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: Galactosyl-P-P-undecaprenol synthase [H]
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MRDSSARVQAAEILSVLGGTTFAVAVSSDVAVHRETWVRVIFGVGMVAAWAVLLTAQRSSDPKILGRGFEEYKRVLVATG KLLGLVAVVLLVTGSPLPRQTLLIAIATGLGGCMLAHLVSTVVLVRQRIHPDGQRTRLLLVGTRAEADRVAAAVAEDARA GYEVVAFHALGAHSNELVSVTGGSEVPGEIPEEPVVDTAEITELARVHQAQSVVISSADRLSDECLRDLRWALHPYGVDL MVVPGVAAVAQPKLSLERLNGLSLLRVDEPGYSSLSALGKALFDRLLSLVLLVVAAPLFVVVAALIKLEDGGPVFYRPAR VGRHGEPFRMWKFRSMQPEADARLAEVRALSGKSGDAFYKWAEDPRVTRIGRALRRTSLDELPQLINVVVGEMSLIGPRP MVDGEGAEFPGFVERRLLVKPGMTGLWQVSGRSDISEQDRVRLDLYYVENWSMDQDLRILARTAMTVARGRGAY
Sequences:
>Translated_474_residues MRDSSARVQAAEILSVLGGTTFAVAVSSDVAVHRETWVRVIFGVGMVAAWAVLLTAQRSSDPKILGRGFEEYKRVLVATG KLLGLVAVVLLVTGSPLPRQTLLIAIATGLGGCMLAHLVSTVVLVRQRIHPDGQRTRLLLVGTRAEADRVAAAVAEDARA GYEVVAFHALGAHSNELVSVTGGSEVPGEIPEEPVVDTAEITELARVHQAQSVVISSADRLSDECLRDLRWALHPYGVDL MVVPGVAAVAQPKLSLERLNGLSLLRVDEPGYSSLSALGKALFDRLLSLVLLVVAAPLFVVVAALIKLEDGGPVFYRPAR VGRHGEPFRMWKFRSMQPEADARLAEVRALSGKSGDAFYKWAEDPRVTRIGRALRRTSLDELPQLINVVVGEMSLIGPRP MVDGEGAEFPGFVERRLLVKPGMTGLWQVSGRSDISEQDRVRLDLYYVENWSMDQDLRILARTAMTVARGRGAY >Mature_474_residues MRDSSARVQAAEILSVLGGTTFAVAVSSDVAVHRETWVRVIFGVGMVAAWAVLLTAQRSSDPKILGRGFEEYKRVLVATG KLLGLVAVVLLVTGSPLPRQTLLIAIATGLGGCMLAHLVSTVVLVRQRIHPDGQRTRLLLVGTRAEADRVAAAVAEDARA GYEVVAFHALGAHSNELVSVTGGSEVPGEIPEEPVVDTAEITELARVHQAQSVVISSADRLSDECLRDLRWALHPYGVDL MVVPGVAAVAQPKLSLERLNGLSLLRVDEPGYSSLSALGKALFDRLLSLVLLVVAAPLFVVVAALIKLEDGGPVFYRPAR VGRHGEPFRMWKFRSMQPEADARLAEVRALSGKSGDAFYKWAEDPRVTRIGRALRRTSLDELPQLINVVVGEMSLIGPRP MVDGEGAEFPGFVERRLLVKPGMTGLWQVSGRSDISEQDRVRLDLYYVENWSMDQDLRILARTAMTVARGRGAY
Specific function: Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=298, Percent_Identity=31.2080536912752, Blast_Score=142, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: =2.7.8.6 [H]
Molecular weight: Translated: 51384; Mature: 51384
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSSARVQAAEILSVLGGTTFAVAVSSDVAVHRETWVRVIFGVGMVAAWAVLLTAQRSS CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPKILGRGFEEYKRVLVATGKLLGLVAVVLLVTGSPLPRQTLLIAIATGLGGCMLAHLVS CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHH TVVLVRQRIHPDGQRTRLLLVGTRAEADRVAAAVAEDARAGYEVVAFHALGAHSNELVSV HHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEE TGGSEVPGEIPEEPVVDTAEITELARVHQAQSVVISSADRLSDECLRDLRWALHPYGVDL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE MVVPGVAAVAQPKLSLERLNGLSLLRVDEPGYSSLSALGKALFDRLLSLVLLVVAAPLFV EEECCCHHHHCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAALIKLEDGGPVFYRPARVGRHGEPFRMWKFRSMQPEADARLAEVRALSGKSGDAFYK HHHHHHEECCCCCEEECCHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE WAEDPRVTRIGRALRRTSLDELPQLINVVVGEMSLIGPRPMVDGEGAEFPGFVERRLLVK ECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEEC PGMTGLWQVSGRSDISEQDRVRLDLYYVENWSMDQDLRILARTAMTVARGRGAY CCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRDSSARVQAAEILSVLGGTTFAVAVSSDVAVHRETWVRVIFGVGMVAAWAVLLTAQRSS CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPKILGRGFEEYKRVLVATGKLLGLVAVVLLVTGSPLPRQTLLIAIATGLGGCMLAHLVS CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHH TVVLVRQRIHPDGQRTRLLLVGTRAEADRVAAAVAEDARAGYEVVAFHALGAHSNELVSV HHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEE TGGSEVPGEIPEEPVVDTAEITELARVHQAQSVVISSADRLSDECLRDLRWALHPYGVDL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE MVVPGVAAVAQPKLSLERLNGLSLLRVDEPGYSSLSALGKALFDRLLSLVLLVVAAPLFV EEECCCHHHHCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAALIKLEDGGPVFYRPARVGRHGEPFRMWKFRSMQPEADARLAEVRALSGKSGDAFYK HHHHHHEECCCCCEEECCHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE WAEDPRVTRIGRALRRTSLDELPQLINVVVGEMSLIGPRPMVDGEGAEFPGFVERRLLVK ECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEEC PGMTGLWQVSGRSDISEQDRVRLDLYYVENWSMDQDLRILARTAMTVARGRGAY CCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1710759; 11677609 [H]