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The map label for this gene is abrB [H]

Identifier: 108798214

GI number: 108798214

Start: 1345868

End: 1347019

Strand: Direct

Name: abrB [H]

Synonym: Mmcs_1243

Alternate gene names: 108798214

Gene position: 1345868-1347019 (Clockwise)

Preceding gene: 108798211

Following gene: 108798216

Centisome position: 23.59

GC content: 72.31

Gene sequence:

>1152_bases
TTGGCATTGACCCGTTGGGGAGGTTGGATGCGGCGGATGCTGAAGTGGGTGTTGCTGGCGGCGGCGTCGGTCGCCGTCAC
CGTTCCGCTGACCCTCGCCGGCGTGCCGTCGGCCGGACTGTTCGCGGCACTGGCCGTCGGCGTCGTACTCGCACTGCTCT
CGCTGGCACCCGCCGGGGTTCCCCGGCCCGCGGGGGTGGTGGCGCAGGGAGTCCTCGGGGTCTACATCGGCACGATGGTG
CAGCACAACGCCTTCGCCGCGCTCGGTTCGGACTGGCCGTTCGTCGTCGGCATCGCCGTCGCGACCCTGCTGCTGAGCGT
GGCCGCGGGGGCGTTGCTCGGACTGCATCGCGAGGTCACCCCGCTGACCGGGTCGCTGGCGCTGACCGCCGGCGGCGCCT
CCGGCCTGGTGGCCATCGCCCGCGACCTCGGCGGCGACGACCGGGTGGTGTCGGTGGTGCAGTACCTGCGGGTGGCCCTG
GTGACGGCGTCCATGCCGCTGGTCGTCGCGTTCGTCTACCACCCCGACAAATCCCACCCCTCCGCGGGCATGGCCCAACA
GTCAACGGCGCCTTGGTATCTGAGCCTCGCCATGCTGGCGGCCCTGGTGCTGGTCGGCGCCGTGGGCGGTCGGCTGCTGC
GGTTGCCGGGCGCCGGTCTGCTCGGGCCGATGGCGCTCACCGTGGTGTTGCAGCTGACCGGTCTGTCGTTCGGGTTGTCG
GTCCCGGCGCTCCTGGTGCAGGCCGCCTACTTCGTGATCGGCTGGCAGGCCGGGTTGGCGTTCACCACCGAGTCGCTGCG
CGCGATCGCCCGGATCCTGCCCGCCGCGCTCGCGCTGATCGCGGTGCTGGGCGTCGGCACGGCCGGTCTCGGGGTGGTGC
TCGCCCACTACACCGCGCTGACGCCGCTCGAGGGATACCTCGCGACCAGCCCCGGCGGGGTGTACGCGGTGCTGGCGACG
GCGGTGGAGACGGGGTCCAACGTCACGTTCATCATCGCCGCGCAGGTCTTGCGGGTGCTGCTCATGCTGTTCGCCTCACC
GCTGCTGGCCCGCTTCGTCGTGTGGGCGAGCCGGCGGCTGAGCCGTCACGCCGGCGATCAGAGCGATGCGACGACGCCGG
CCAGCAGAGCACCCATCCGCGTCGCGGACTGA

Upstream 100 bases:

>100_bases
GGGAGCGGCGCGATCGGTCATGAACAAGTTATACCTTCACAGTTGTCAGGTCCGTAGCGCTTTCGTTGCATGTTGCGTCA
TGGAAATGCCAAGGACATAC

Downstream 100 bases:

>100_bases
CGGCCCGCCTCCAGCACCTCCTGGTGCGAGAGCGGCTGCCCGGTCATGCCGGCGGCCAGATTGGTCACCAGCGAGATCGC
CAGCACCTCGGCGCCCGCCG

Product: putative ammonia monooxygenase

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MALTRWGGWMRRMLKWVLLAAASVAVTVPLTLAGVPSAGLFAALAVGVVLALLSLAPAGVPRPAGVVAQGVLGVYIGTMV
QHNAFAALGSDWPFVVGIAVATLLLSVAAGALLGLHREVTPLTGSLALTAGGASGLVAIARDLGGDDRVVSVVQYLRVAL
VTASMPLVVAFVYHPDKSHPSAGMAQQSTAPWYLSLAMLAALVLVGAVGGRLLRLPGAGLLGPMALTVVLQLTGLSFGLS
VPALLVQAAYFVIGWQAGLAFTTESLRAIARILPAALALIAVLGVGTAGLGVVLAHYTALTPLEGYLATSPGGVYAVLAT
AVETGSNVTFIIAAQVLRVLLMLFASPLLARFVVWASRRLSRHAGDQSDATTPASRAPIRVAD

Sequences:

>Translated_383_residues
MALTRWGGWMRRMLKWVLLAAASVAVTVPLTLAGVPSAGLFAALAVGVVLALLSLAPAGVPRPAGVVAQGVLGVYIGTMV
QHNAFAALGSDWPFVVGIAVATLLLSVAAGALLGLHREVTPLTGSLALTAGGASGLVAIARDLGGDDRVVSVVQYLRVAL
VTASMPLVVAFVYHPDKSHPSAGMAQQSTAPWYLSLAMLAALVLVGAVGGRLLRLPGAGLLGPMALTVVLQLTGLSFGLS
VPALLVQAAYFVIGWQAGLAFTTESLRAIARILPAALALIAVLGVGTAGLGVVLAHYTALTPLEGYLATSPGGVYAVLAT
AVETGSNVTFIIAAQVLRVLLMLFASPLLARFVVWASRRLSRHAGDQSDATTPASRAPIRVAD
>Mature_382_residues
ALTRWGGWMRRMLKWVLLAAASVAVTVPLTLAGVPSAGLFAALAVGVVLALLSLAPAGVPRPAGVVAQGVLGVYIGTMVQ
HNAFAALGSDWPFVVGIAVATLLLSVAAGALLGLHREVTPLTGSLALTAGGASGLVAIARDLGGDDRVVSVVQYLRVALV
TASMPLVVAFVYHPDKSHPSAGMAQQSTAPWYLSLAMLAALVLVGAVGGRLLRLPGAGLLGPMALTVVLQLTGLSFGLSV
PALLVQAAYFVIGWQAGLAFTTESLRAIARILPAALALIAVLGVGTAGLGVVLAHYTALTPLEGYLATSPGGVYAVLATA
VETGSNVTFIIAAQVLRVLLMLFASPLLARFVVWASRRLSRHAGDQSDATTPASRAPIRVAD

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=355, Percent_Identity=30.7042253521127, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 38990; Mature: 38859

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTRWGGWMRRMLKWVLLAAASVAVTVPLTLAGVPSAGLFAALAVGVVLALLSLAPAGV
CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
PRPAGVVAQGVLGVYIGTMVQHNAFAALGSDWPFVVGIAVATLLLSVAAGALLGLHREVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLTGSLALTAGGASGLVAIARDLGGDDRVVSVVQYLRVALVTASMPLVVAFVYHPDKSHP
CCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCC
SAGMAQQSTAPWYLSLAMLAALVLVGAVGGRLLRLPGAGLLGPMALTVVLQLTGLSFGLS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCHHCHH
VPALLVQAAYFVIGWQAGLAFTTESLRAIARILPAALALIAVLGVGTAGLGVVLAHYTAL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TPLEGYLATSPGGVYAVLATAVETGSNVTFIIAAQVLRVLLMLFASPLLARFVVWASRRL
CCCCCEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRHAGDQSDATTPASRAPIRVAD
HHHCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
ALTRWGGWMRRMLKWVLLAAASVAVTVPLTLAGVPSAGLFAALAVGVVLALLSLAPAGV
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
PRPAGVVAQGVLGVYIGTMVQHNAFAALGSDWPFVVGIAVATLLLSVAAGALLGLHREVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLTGSLALTAGGASGLVAIARDLGGDDRVVSVVQYLRVALVTASMPLVVAFVYHPDKSHP
CCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCC
SAGMAQQSTAPWYLSLAMLAALVLVGAVGGRLLRLPGAGLLGPMALTVVLQLTGLSFGLS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCHHCHH
VPALLVQAAYFVIGWQAGLAFTTESLRAIARILPAALALIAVLGVGTAGLGVVLAHYTAL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TPLEGYLATSPGGVYAVLATAVETGSNVTFIIAAQVLRVLLMLFASPLLARFVVWASRRL
CCCCCEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRHAGDQSDATTPASRAPIRVAD
HHHCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]