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The map label for this gene is ynjA [H]

Identifier: 108798195

GI number: 108798195

Start: 1323496

End: 1324074

Strand: Reverse

Name: ynjA [H]

Synonym: Mmcs_1224

Alternate gene names: 108798195

Gene position: 1324074-1323496 (Counterclockwise)

Preceding gene: 108798198

Following gene: 108798193

Centisome position: 23.21

GC content: 67.01

Gene sequence:

>579_bases
ATGACACACACATCGCGTATCGAACCCCTTGCCCCGCAGCGTGCCTCGCTGTTGACCAAGCTGTTCTACCGGATGGCCAA
ACGCCGCTTCGGTGAGGTGCCCGAACCGTTCGCCGTCGCCGCCCACCATCCGCGGCTGATGCTCGCCAACGTCGTTCACG
AAGGTCTGCTGCAGTCGGGTTCGAAGGTCCTGCCGGCCAGCGTCCGTGAGCTCGCGGTGTTCTGGACCGCGCGCACCGTC
GGCTGTTCGTGGTGTGTCGACTTCGGCGCGATGTTGCAGCGCCTCGACGGCCTCGACGTCGAGCGGCTCACCGAGATCGA
TCACTACGCCACCTCACCGCTCTACACCGACGACGAGCGCGCGGCGATCGCCTACGCCGACGCGATGACCACAGACCCCC
ACACCGTCACCGACGACCAGGTGGCCGATCTGCGCCGCCGGTTCGGGGAGGCCGGGGTGATCGAGCTGACCTACCAGATC
GGGGTGGAGAACATGCGAGCCCGGATGTATGCGGCGCTGGGCATCACCGAGCAGGGGTTCAGTACCGACGCCTGCCGGGT
GCCATGGGCGAAGCCGTGA

Upstream 100 bases:

>100_bases
TCGCCCCGACTCGATATTGACCCCTACCGAGCTTATCGACTCGGCAGTGACAGCGTTACAAGCGCTGTCACTATTCCGGG
GGCTATCTCGTCGTAGGGGT

Downstream 100 bases:

>100_bases
ACTTGTCCGGGTTGGCGACGTCCCAGATCGCGCACACCTTGCCGTCGCGCACGGTCAGCGCCTGGATGCGCGGCGCCATC
GCGGGCCACTCACCGTCGGC

Product: putative transposase fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTHTSRIEPLAPQRASLLTKLFYRMAKRRFGEVPEPFAVAAHHPRLMLANVVHEGLLQSGSKVLPASVRELAVFWTARTV
GCSWCVDFGAMLQRLDGLDVERLTEIDHYATSPLYTDDERAAIAYADAMTTDPHTVTDDQVADLRRRFGEAGVIELTYQI
GVENMRARMYAALGITEQGFSTDACRVPWAKP

Sequences:

>Translated_192_residues
MTHTSRIEPLAPQRASLLTKLFYRMAKRRFGEVPEPFAVAAHHPRLMLANVVHEGLLQSGSKVLPASVRELAVFWTARTV
GCSWCVDFGAMLQRLDGLDVERLTEIDHYATSPLYTDDERAAIAYADAMTTDPHTVTDDQVADLRRRFGEAGVIELTYQI
GVENMRARMYAALGITEQGFSTDACRVPWAKP
>Mature_191_residues
THTSRIEPLAPQRASLLTKLFYRMAKRRFGEVPEPFAVAAHHPRLMLANVVHEGLLQSGSKVLPASVRELAVFWTARTVG
CSWCVDFGAMLQRLDGLDVERLTEIDHYATSPLYTDDERAAIAYADAMTTDPHTVTDDQVADLRRRFGEAGVIELTYQIG
VENMRARMYAALGITEQGFSTDACRVPWAKP

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=162, Percent_Identity=30.8641975308642, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 21453; Mature: 21322

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHTSRIEPLAPQRASLLTKLFYRMAKRRFGEVPEPFAVAAHHPRLMLANVVHEGLLQSG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCC
SKVLPASVRELAVFWTARTVGCSWCVDFGAMLQRLDGLDVERLTEIDHYATSPLYTDDER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
AAIAYADAMTTDPHTVTDDQVADLRRRFGEAGVIELTYQIGVENMRARMYAALGITEQGF
CEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCC
STDACRVPWAKP
CCCCCCCCCCCC
>Mature Secondary Structure 
THTSRIEPLAPQRASLLTKLFYRMAKRRFGEVPEPFAVAAHHPRLMLANVVHEGLLQSG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCC
SKVLPASVRELAVFWTARTVGCSWCVDFGAMLQRLDGLDVERLTEIDHYATSPLYTDDER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
AAIAYADAMTTDPHTVTDDQVADLRRRFGEAGVIELTYQIGVENMRARMYAALGITEQGF
CEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCC
STDACRVPWAKP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]