| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108798145
Identifier: 108798145
GI number: 108798145
Start: 1272763
End: 1273461
Strand: Direct
Name: 108798145
Synonym: Mmcs_1174
Alternate gene names: NA
Gene position: 1272763-1273461 (Clockwise)
Preceding gene: 108798144
Following gene: 108798146
Centisome position: 22.31
GC content: 73.68
Gene sequence:
>699_bases GTGACAGCTGCGACCAACCTCAGCCTGACCCATCGTACCCGCGCTGAGCAGGTCGAACACCTGCGCAAACAGATGGCCGC AGTGGCAGGCAAGGTCGGGTCGGGCCGACGTGGTCCGACCCCCTCCGCCGACCCGTCACCGGCCTCGGAAAGTTTGCTGC CGCTGCCCGAATCGCTGGCTGAGCAGCTGCCGAGGTCGTTGCCGCGCGGGACGGTCGCGGTGCTCGCGGGTGCCCGGTCA CTGCCGCTGGGCATGGTCGCGGCGACGACGGCGGCCGGTGGTCACGCCGCCATCGTCGGTCAACCCGATGCCGGTCTGCT GGCCGCGGTGGAGATGGGTGCGGACCTCAGCAGGCTGGCCGTCATCCCGGATCCGGGCGGCGATCCGGTGGAGGTGGCGG CGGTCCTGATGGACGGGATGGATCTGGTGGTGCTCGGGCTGGGCGGTCGGTCGGTACCCGCGGGCCGGGCCCGCGCGGTG ACGGCCCGGGCGCGGCAGAAGGGATGCACGCTGCTGGTCACCAACGGTGACTGGCCCGGGGCGACGGCCCGGTTGGAGGC CCGGGTGTGCGGTTTCGAGGTGGCAGGTGCCGGTTCGTCCGGGGCGCCGACGCCGGGGTGCGGGCGGATCAGCCGGGTGC GGTTGGCGATGCGGGCGAGAAGCCGGGGCCACGGCCCGGCCCTGGCGGTCGGTGAGTAG
Upstream 100 bases:
>100_bases ACCTGCCGGGCTTGACGCTTGTCGGTGGGTCGGTGTTTACTCGTCGTATCGAACATGAGTTCGAATAACGAGTGTTCCTG GTGATGTTGGAGGTGTGGTT
Downstream 100 bases:
>100_bases CGTGGCTCGGTCCCATCGAGAAACGGCCGCCCGGGTGCTCGCGGTCTGGTGCATGGACTGGCCGGCGGTCGCCGCCGCCG CGGCGGCGCACCTGCCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTAATNLSLTHRTRAEQVEHLRKQMAAVAGKVGSGRRGPTPSADPSPASESLLPLPESLAEQLPRSLPRGTVAVLAGARS LPLGMVAATTAAGGHAAIVGQPDAGLLAAVEMGADLSRLAVIPDPGGDPVEVAAVLMDGMDLVVLGLGGRSVPAGRARAV TARARQKGCTLLVTNGDWPGATARLEARVCGFEVAGAGSSGAPTPGCGRISRVRLAMRARSRGHGPALAVGE
Sequences:
>Translated_232_residues MTAATNLSLTHRTRAEQVEHLRKQMAAVAGKVGSGRRGPTPSADPSPASESLLPLPESLAEQLPRSLPRGTVAVLAGARS LPLGMVAATTAAGGHAAIVGQPDAGLLAAVEMGADLSRLAVIPDPGGDPVEVAAVLMDGMDLVVLGLGGRSVPAGRARAV TARARQKGCTLLVTNGDWPGATARLEARVCGFEVAGAGSSGAPTPGCGRISRVRLAMRARSRGHGPALAVGE >Mature_231_residues TAATNLSLTHRTRAEQVEHLRKQMAAVAGKVGSGRRGPTPSADPSPASESLLPLPESLAEQLPRSLPRGTVAVLAGARSL PLGMVAATTAAGGHAAIVGQPDAGLLAAVEMGADLSRLAVIPDPGGDPVEVAAVLMDGMDLVVLGLGGRSVPAGRARAVT ARARQKGCTLLVTNGDWPGATARLEARVCGFEVAGAGSSGAPTPGCGRISRVRLAMRARSRGHGPALAVGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23260; Mature: 23129
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATNLSLTHRTRAEQVEHLRKQMAAVAGKVGSGRRGPTPSADPSPASESLLPLPESLA CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH EQLPRSLPRGTVAVLAGARSLPLGMVAATTAAGGHAAIVGQPDAGLLAAVEMGADLSRLA HHHHHHCCCCEEEEEECCCCCCCHHEEEECCCCCCEEEEECCCCCEEEHHHCCCCCEEEE VIPDPGGDPVEVAAVLMDGMDLVVLGLGGRSVPAGRARAVTARARQKGCTLLVTNGDWPG EECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCC ATARLEARVCGFEVAGAGSSGAPTPGCGRISRVRLAMRARSRGHGPALAVGE CCEEEEEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure TAATNLSLTHRTRAEQVEHLRKQMAAVAGKVGSGRRGPTPSADPSPASESLLPLPESLA CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH EQLPRSLPRGTVAVLAGARSLPLGMVAATTAAGGHAAIVGQPDAGLLAAVEMGADLSRLA HHHHHHCCCCEEEEEECCCCCCCHHEEEECCCCCCEEEEECCCCCEEEHHHCCCCCEEEE VIPDPGGDPVEVAAVLMDGMDLVVLGLGGRSVPAGRARAVTARARQKGCTLLVTNGDWPG EECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCC ATARLEARVCGFEVAGAGSSGAPTPGCGRISRVRLAMRARSRGHGPALAVGE CCEEEEEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]