| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798115
Identifier: 108798115
GI number: 108798115
Start: 1241414
End: 1242091
Strand: Direct
Name: 108798115
Synonym: Mmcs_1143
Alternate gene names: NA
Gene position: 1241414-1242091 (Clockwise)
Preceding gene: 108798114
Following gene: 108798116
Centisome position: 21.76
GC content: 70.65
Gene sequence:
>678_bases GTGGCTGCTGTGTCGACCATTGAGGCGGTGCTGAGTGCCCGGCTCTACCGGGAGTGCTACCAGCGGATCGCCGAGCTGGT CGCCCCGCTCGACGACGCGGGGTGCAACACCCCGGTGCCGGCATGTCCGGCGTGGACGGTACGCGATGTCGTGGCCCACG TCGTCGCGGTCGCCCAGGAATGGTGCGACGGCCGCCTGTCCGGTGTGCCCACCGACGCGTACACCGCCGCGCAGGTCGCC CGATTCGACGAGACCTCGACTGTCGACCTGCTCGCCGCCGGATCCGAGGCGGTGCGGCGCCTGGACGAGTTGGCGCGCAG TCGTGGCCTGGTCGCCCCGGTCGGCGACATCGTCAGCCACGAGCACGACATCCGCGGGGCGCTCGGCCGCCCGGGAGCGC GCGACTCCGCGGCGGTGGGGTACGTGTTCGACCAGTTGGTCGACATGTTGGAGCCGCCCATGGCGCTGTGCGTGATCGTC GAAGACGGCGAGTACCACACCGGACCCGCCGACGGTGATGAACTGCGCTTGCGGACTTCGCGATTCGAAACGCTGCGCTG GCGCACAGGGCGCCGCAGCCATGCGCAACTGGTGGCGATGGACTGGTCGGGTGACCCCGCGCCGGTACTCGACGCGCTCT ACCTGTTCGGGCCGGCCGCCACCGACATCGTCGAGTAA
Upstream 100 bases:
>100_bases GGCCGGCAGGAGACCTGGGAGGACTCGCCGGCGGGCTACCCGCAGGATCCGCCGTATGAATGGTGGTGCTGGCACGACGA ATACGGCCAGTCCGAGGAGC
Downstream 100 bases:
>100_bases GCGCACCCGCACGCACCACCTGCCCACGTAGGGTGTGCGTGATGCGGCACTACTACAGCGCGGAGGCGATCCGCGACGCG GAAGCACCGTTGCTGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAAVSTIEAVLSARLYRECYQRIAELVAPLDDAGCNTPVPACPAWTVRDVVAHVVAVAQEWCDGRLSGVPTDAYTAAQVA RFDETSTVDLLAAGSEAVRRLDELARSRGLVAPVGDIVSHEHDIRGALGRPGARDSAAVGYVFDQLVDMLEPPMALCVIV EDGEYHTGPADGDELRLRTSRFETLRWRTGRRSHAQLVAMDWSGDPAPVLDALYLFGPAATDIVE
Sequences:
>Translated_225_residues MAAVSTIEAVLSARLYRECYQRIAELVAPLDDAGCNTPVPACPAWTVRDVVAHVVAVAQEWCDGRLSGVPTDAYTAAQVA RFDETSTVDLLAAGSEAVRRLDELARSRGLVAPVGDIVSHEHDIRGALGRPGARDSAAVGYVFDQLVDMLEPPMALCVIV EDGEYHTGPADGDELRLRTSRFETLRWRTGRRSHAQLVAMDWSGDPAPVLDALYLFGPAATDIVE >Mature_224_residues AAVSTIEAVLSARLYRECYQRIAELVAPLDDAGCNTPVPACPAWTVRDVVAHVVAVAQEWCDGRLSGVPTDAYTAAQVAR FDETSTVDLLAAGSEAVRRLDELARSRGLVAPVGDIVSHEHDIRGALGRPGARDSAAVGYVFDQLVDMLEPPMALCVIVE DGEYHTGPADGDELRLRTSRFETLRWRTGRRSHAQLVAMDWSGDPAPVLDALYLFGPAATDIVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24271; Mature: 24139
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSTIEAVLSARLYRECYQRIAELVAPLDDAGCNTPVPACPAWTVRDVVAHVVAVAQE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH WCDGRLSGVPTDAYTAAQVARFDETSTVDLLAAGSEAVRRLDELARSRGLVAPVGDIVSH HHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCC EHDIRGALGRPGARDSAAVGYVFDQLVDMLEPPMALCVIVEDGEYHTGPADGDELRLRTS CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHH RFETLRWRTGRRSHAQLVAMDWSGDPAPVLDALYLFGPAATDIVE HHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure AAVSTIEAVLSARLYRECYQRIAELVAPLDDAGCNTPVPACPAWTVRDVVAHVVAVAQE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH WCDGRLSGVPTDAYTAAQVARFDETSTVDLLAAGSEAVRRLDELARSRGLVAPVGDIVSH HHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCC EHDIRGALGRPGARDSAAVGYVFDQLVDMLEPPMALCVIVEDGEYHTGPADGDELRLRTS CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHH RFETLRWRTGRRSHAQLVAMDWSGDPAPVLDALYLFGPAATDIVE HHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA