| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798114
Identifier: 108798114
GI number: 108798114
Start: 1240741
End: 1241436
Strand: Direct
Name: 108798114
Synonym: Mmcs_1142
Alternate gene names: NA
Gene position: 1240741-1241436 (Clockwise)
Preceding gene: 108798111
Following gene: 108798115
Centisome position: 21.75
GC content: 66.95
Gene sequence:
>696_bases ATGAGCACACCATCGATCGTGTCGGCGCAGGAATGGCAGGACGCGCACCGGCAGATGCTGGTCAGGGAGAAGGAGATGAC GCGCGCCCGGGACGCACTCGCCGCGATGCGCAGGCGGATGCCGTGGATGGCGGTGGACAAGCCGTACGCGTTCGAGGGGC CGAACGGGCCGGCGACGCTGCTCGATCTCTTCGACGGCCGTCGTCAACTGATCGTGTACCGCGCCTTCGTCGAACCGGGT GTGCACGGCTGGCCCGACCACGGCTGTGTGGGCTGTTCGTTGATGGCCGACCACATCGGCAACCTCGCCCACCTCAACGC GCGCGACACCACGCTGGTCTACGCCTCGCGCGCATCGCAGCCGGACCTGGCGCGGGTGAAGGCGCGAATGGGTTGGGACA TCCCGTGGTTCACGATCACCGACGACTTCGACGCCGACTTCGGATGCGACCAGTGGCACGGCACCAACGCCTTCATCCGC GACGGCGACCGGGTCTTCCGCACGTACTTCATCAACGACCGCGGCGACGAGGCGTTCGTCAACACCTGGACGTTCCTCGA CATGACCGCGCTCGGCCGGCAGGAGACCTGGGAGGACTCGCCGGCGGGCTACCCGCAGGATCCGCCGTATGAATGGTGGT GCTGGCACGACGAATACGGCCAGTCCGAGGAGCGTGGCTGCTGTGTCGACCATTGA
Upstream 100 bases:
>100_bases ACCTGATCTTCAACCATGTTGTTGACTATAGCGGCCCGGGTGTGGTGTGCTGGGCGAAGTAACGTTCAACTATATTGTTT AATGTTGGTGAGGGGCCGCG
Downstream 100 bases:
>100_bases GGCGGTGCTGAGTGCCCGGCTCTACCGGGAGTGCTACCAGCGGATCGCCGAGCTGGTCGCCCCGCTCGACGACGCGGGGT GCAACACCCCGGTGCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSTPSIVSAQEWQDAHRQMLVREKEMTRARDALAAMRRRMPWMAVDKPYAFEGPNGPATLLDLFDGRRQLIVYRAFVEPG VHGWPDHGCVGCSLMADHIGNLAHLNARDTTLVYASRASQPDLARVKARMGWDIPWFTITDDFDADFGCDQWHGTNAFIR DGDRVFRTYFINDRGDEAFVNTWTFLDMTALGRQETWEDSPAGYPQDPPYEWWCWHDEYGQSEERGCCVDH
Sequences:
>Translated_231_residues MSTPSIVSAQEWQDAHRQMLVREKEMTRARDALAAMRRRMPWMAVDKPYAFEGPNGPATLLDLFDGRRQLIVYRAFVEPG VHGWPDHGCVGCSLMADHIGNLAHLNARDTTLVYASRASQPDLARVKARMGWDIPWFTITDDFDADFGCDQWHGTNAFIR DGDRVFRTYFINDRGDEAFVNTWTFLDMTALGRQETWEDSPAGYPQDPPYEWWCWHDEYGQSEERGCCVDH >Mature_230_residues STPSIVSAQEWQDAHRQMLVREKEMTRARDALAAMRRRMPWMAVDKPYAFEGPNGPATLLDLFDGRRQLIVYRAFVEPGV HGWPDHGCVGCSLMADHIGNLAHLNARDTTLVYASRASQPDLARVKARMGWDIPWFTITDDFDADFGCDQWHGTNAFIRD GDRVFRTYFINDRGDEAFVNTWTFLDMTALGRQETWEDSPAGYPQDPPYEWWCWHDEYGQSEERGCCVDH
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26642; Mature: 26511
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPSIVSAQEWQDAHRQMLVREKEMTRARDALAAMRRRMPWMAVDKPYAFEGPNGPATL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCCHHH LDLFDGRRQLIVYRAFVEPGVHGWPDHGCVGCSLMADHIGNLAHLNARDTTLVYASRASQ HHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEEECCCCC PDLARVKARMGWDIPWFTITDDFDADFGCDQWHGTNAFIRDGDRVFRTYFINDRGDEAFV CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCCEEE NTWTFLDMTALGRQETWEDSPAGYPQDPPYEWWCWHDEYGQSEERGCCVDH EEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure STPSIVSAQEWQDAHRQMLVREKEMTRARDALAAMRRRMPWMAVDKPYAFEGPNGPATL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCCHHH LDLFDGRRQLIVYRAFVEPGVHGWPDHGCVGCSLMADHIGNLAHLNARDTTLVYASRASQ HHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEEECCCCC PDLARVKARMGWDIPWFTITDDFDADFGCDQWHGTNAFIRDGDRVFRTYFINDRGDEAFV CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCCEEE NTWTFLDMTALGRQETWEDSPAGYPQDPPYEWWCWHDEYGQSEERGCCVDH EEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA