| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798108
Identifier: 108798108
GI number: 108798108
Start: 1234741
End: 1236030
Strand: Direct
Name: 108798108
Synonym: Mmcs_1136
Alternate gene names: NA
Gene position: 1234741-1236030 (Clockwise)
Preceding gene: 108798107
Following gene: 108798111
Centisome position: 21.64
GC content: 72.09
Gene sequence:
>1290_bases GTGGCCGGGACCTTCGATGTGGCGGGCCGGTTGGCCGAAGGACGGCCTGCCGTCGACGATTTCACGCGCTACGTCTCGGC GTGTCAGGTGCTCGGCACCTGCGGTCACGGCCTGAACGACCGGCTGGAGCAGGCCTACGCCAGTGAGGCGGGCCTGGATC TGTACGCGCTCGACGCCGACCACGCCGCACTCCGCGCGGCGGTCGCCGCGGTGCGCGAGGCTCAGGAACTGCAGGACGCG CAGCTGAATGCGTTGAGTGCGGCGTGGACGGGGACGGGTGCGGATGCGGCCGCCGAGTTCCTGCACCGGCACAGTGCCGC ATCGGCGCAAGCGGTCACCGCGCTGTCCACCGCGGCCGAGCAGGTGGGCGCCCTGCGCGACGAGCTCTGGCGGATCGTCG ACGCCAAGGTCGCAGCCGCGGAAGCCGTCGACGCGCGAACCGCCGGCGTGCGCGGGGAATGGCGGGCGGCCGCGGAGACC GTCACCACGGGGGTGGGTGACCAGGCCACCGCCAGCGAATTGGTCGACGCCCACGTCGCACCGTTCGTCGAACAGGACGT GCGAGCGGAGTGGGTCGCCGCCATGGAGGCTGCGAGCGCGGCAGTCGCGCAGTGCTTCGACACCGCCACCACTGCGGTGA GAAGCGAAGGGCCACCGCGCTTTCCGGAGCCTGCGGAGTCATGGTCGCCTGCGCCCACGCCTACTGTGGCCGCGGCCGCG CCGGGGCCGCCGCCACCTGCGACGGCACCCGCGCCGATGACCGAACCCGCGGCCGCAGCCGCGATGCCCACGGCGCCGAT GCCCACGGCGGGCGCGCTACCGGATATGGGCTCGGGCCTCTCGGGTCTTTCGGGTCTATCCGGTGGTGTCGGGGGTCTCG GTCAGCAACTCGGCGAGATGGTCAGTGGCCTGATGCCCTCGCTCGGCGAGGCACTCGGTGACCCGCCCGATCTCGACGAG CCCGACGACGCGCTCGAACTCGACGAAGACGCGCACGAAGACGAAGACGACAAAGAAGAGGACGACGAAGAGGCCGAAGA ACAGAAGGCTGAGCCCGACCCGGAATCCGAGCCCGAGGAGCCGGCCGCGGTTGAAAAGCCTGAGGCCGCCACTGTCGATG CCACTGCCGACGAGCCCATGCCTTCGCCGCCCGTGCCCGAGCCGCCCGCCCCGACGCCGCCCCCGGCGCCCGCGGCTCCA TTGGCCGAACCGATTGCACCGCCACCCGGGCCGGACTCGGCGACACCGTGTGAGATCGCCGCGAACGAGGTTCCGCAGGT TGGCGAGTGA
Upstream 100 bases:
>100_bases GTGGGCGCGCTCGGCGGGTGGGGTCGCTTCGGAGTTGCGCGCGTCGGCCGTTCGGTATGCCCAGGCCGACGCCGACGCGG CATTGCGGGTGCGGTGAGCC
Downstream 100 bases:
>100_bases GTTCCGCGACTCAGGGGAGCAGCGCCTGCAAGTCCTCCACGAAACGCACCGATTCGCGGCGGTCGGCGGTCACCGGCTGC AGCAGCAGGGTGGTGGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MAGTFDVAGRLAEGRPAVDDFTRYVSACQVLGTCGHGLNDRLEQAYASEAGLDLYALDADHAALRAAVAAVREAQELQDA QLNALSAAWTGTGADAAAEFLHRHSAASAQAVTALSTAAEQVGALRDELWRIVDAKVAAAEAVDARTAGVRGEWRAAAET VTTGVGDQATASELVDAHVAPFVEQDVRAEWVAAMEAASAAVAQCFDTATTAVRSEGPPRFPEPAESWSPAPTPTVAAAA PGPPPPATAPAPMTEPAAAAAMPTAPMPTAGALPDMGSGLSGLSGLSGGVGGLGQQLGEMVSGLMPSLGEALGDPPDLDE PDDALELDEDAHEDEDDKEEDDEEAEEQKAEPDPESEPEEPAAVEKPEAATVDATADEPMPSPPVPEPPAPTPPPAPAAP LAEPIAPPPGPDSATPCEIAANEVPQVGE
Sequences:
>Translated_429_residues MAGTFDVAGRLAEGRPAVDDFTRYVSACQVLGTCGHGLNDRLEQAYASEAGLDLYALDADHAALRAAVAAVREAQELQDA QLNALSAAWTGTGADAAAEFLHRHSAASAQAVTALSTAAEQVGALRDELWRIVDAKVAAAEAVDARTAGVRGEWRAAAET VTTGVGDQATASELVDAHVAPFVEQDVRAEWVAAMEAASAAVAQCFDTATTAVRSEGPPRFPEPAESWSPAPTPTVAAAA PGPPPPATAPAPMTEPAAAAAMPTAPMPTAGALPDMGSGLSGLSGLSGGVGGLGQQLGEMVSGLMPSLGEALGDPPDLDE PDDALELDEDAHEDEDDKEEDDEEAEEQKAEPDPESEPEEPAAVEKPEAATVDATADEPMPSPPVPEPPAPTPPPAPAAP LAEPIAPPPGPDSATPCEIAANEVPQVGE >Mature_428_residues AGTFDVAGRLAEGRPAVDDFTRYVSACQVLGTCGHGLNDRLEQAYASEAGLDLYALDADHAALRAAVAAVREAQELQDAQ LNALSAAWTGTGADAAAEFLHRHSAASAQAVTALSTAAEQVGALRDELWRIVDAKVAAAEAVDARTAGVRGEWRAAAETV TTGVGDQATASELVDAHVAPFVEQDVRAEWVAAMEAASAAVAQCFDTATTAVRSEGPPRFPEPAESWSPAPTPTVAAAAP GPPPPATAPAPMTEPAAAAAMPTAPMPTAGALPDMGSGLSGLSGLSGGVGGLGQQLGEMVSGLMPSLGEALGDPPDLDEP DDALELDEDAHEDEDDKEEDDEEAEEQKAEPDPESEPEEPAAVEKPEAATVDATADEPMPSPPVPEPPAPTPPPAPAAPL AEPIAPPPGPDSATPCEIAANEVPQVGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43466; Mature: 43334
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTFDVAGRLAEGRPAVDDFTRYVSACQVLGTCGHGLNDRLEQAYASEAGLDLYALDAD CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCH HAALRAAVAAVREAQELQDAQLNALSAAWTGTGADAAAEFLHRHSAASAQAVTALSTAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QVGALRDELWRIVDAKVAAAEAVDARTAGVRGEWRAAAETVTTGVGDQATASELVDAHVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH PFVEQDVRAEWVAAMEAASAAVAQCFDTATTAVRSEGPPRFPEPAESWSPAPTPTVAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCEECCC PGPPPPATAPAPMTEPAAAAAMPTAPMPTAGALPDMGSGLSGLSGLSGGVGGLGQQLGEM CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH VSGLMPSLGEALGDPPDLDEPDDALELDEDAHEDEDDKEEDDEEAEEQKAEPDPESEPEE HHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC PAAVEKPEAATVDATADEPMPSPPVPEPPAPTPPPAPAAPLAEPIAPPPGPDSATPCEIA CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ANEVPQVGE HHCCCCCCC >Mature Secondary Structure AGTFDVAGRLAEGRPAVDDFTRYVSACQVLGTCGHGLNDRLEQAYASEAGLDLYALDAD CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCH HAALRAAVAAVREAQELQDAQLNALSAAWTGTGADAAAEFLHRHSAASAQAVTALSTAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QVGALRDELWRIVDAKVAAAEAVDARTAGVRGEWRAAAETVTTGVGDQATASELVDAHVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH PFVEQDVRAEWVAAMEAASAAVAQCFDTATTAVRSEGPPRFPEPAESWSPAPTPTVAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCEECCC PGPPPPATAPAPMTEPAAAAAMPTAPMPTAGALPDMGSGLSGLSGLSGGVGGLGQQLGEM CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH VSGLMPSLGEALGDPPDLDEPDDALELDEDAHEDEDDKEEDDEEAEEQKAEPDPESEPEE HHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC PAAVEKPEAATVDATADEPMPSPPVPEPPAPTPPPAPAAPLAEPIAPPPGPDSATPCEIA CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ANEVPQVGE HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA