Click here to switch to the map view.

The map label for this gene is 108798079

Identifier: 108798079

GI number: 108798079

Start: 1207560

End: 1208552

Strand: Reverse

Name: 108798079

Synonym: Mmcs_1107

Alternate gene names: NA

Gene position: 1208552-1207560 (Counterclockwise)

Preceding gene: 108798088

Following gene: 108798076

Centisome position: 21.18

GC content: 71.3

Gene sequence:

>993_bases
ATGACCGTTCGGTCGCCGGGCACTGACACCCTGCGTACGGCCCTTTCGCTGGCCAACCGTGCGCCCTCCATCCACAACTC
CCAACCGTGGCACTGGCAGGTGGGCGCCCACAGCGTGCACCTTTACGTCGACGAGTCGCTGCGCCTGGCGCACACCGACC
CGGACGCCCGGGAGCTCATCGTCAGCTGCGGTGCCGCGCTGAACCACTGCGCGGTCGCGCTCACCGCGCTCGGATGGCCA
CCCAAGATCCGCCGCCTCCCGAACCCCGACGACCCCTCGCACCTCGCGTCGCTGGAACTGCACTCGCATCCGCCGAGTGA
GTCGGATATCGCACTCGCCGCCGCGATCCCCCGCCGGCGCACCGACCGGCGCCACTTCAGCGACTGGCCGGTGTCGATGG
GAGACATCGCGTTGATGGGCTCACGGGCCGCCCGCGCGGGTGTGACCATGCGACGCGTCGAGCTGACACCCACGTTCCGA
ACGACACTCGCCCTGGCCGTCGGGCAACACGCGGCCGATCCGGAGTACCTGGCGGAGCTCACCGGCTGGACCGGACGCCA
CGCGTCGACGGTCGGGGTGCCGGCCCGGAACACTCCCGAATCCGACCCGACGGCGGCGGTGCCCGCGCGGCTGTTCGCCG
GCACCACGCTCGAACAGCCGGCCGGCGCGGAGCCGTCGCAGGACAGCGGTGTGGTCGTGGCGCTGGGCACCGTGACCGAC
GATGTCATGGGCCGGTTGCGTGCGGGCGAGGCGGCCAGCATCGTTCTGCTCACCGCGACGACGCTGGGGCTGGCCACGTG
TCCGGTCACCGAACCGCTCGAGATCAGCGCGACGCGTGACGCCATCCGCGACGACGTCTTCGACGACGTGATGTATCCGC
AGATCCTGCTGCGTGTCGGCTGGGCGCCCGTCAACGCGGACCCGCTGCCGGCGACACCACGACGTCCGCTCGGTGAGCTG
GCGACGTGGCTGGACGGATCGGTGCTCGTCTGA

Upstream 100 bases:

>100_bases
GGGGAATCGAAAGGTCCATCCGATTCGGGACCTTCGTCTCTGTCCGACCACGAGGCGCCCGCGGCACCGTGGTGAGGACA
TCATCTCGAGAGGCAAGATC

Downstream 100 bases:

>100_bases
GAGCGCGGTCAGGGGTCCTGCTGCAGATCGACCTCGACCGATACCACCGACCCGTCGAGGTGTCGACGACACGGCCAGCC
GGAATCGGTCAGCACCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTVRSPGTDTLRTALSLANRAPSIHNSQPWHWQVGAHSVHLYVDESLRLAHTDPDARELIVSCGAALNHCAVALTALGWP
PKIRRLPNPDDPSHLASLELHSHPPSESDIALAAAIPRRRTDRRHFSDWPVSMGDIALMGSRAARAGVTMRRVELTPTFR
TTLALAVGQHAADPEYLAELTGWTGRHASTVGVPARNTPESDPTAAVPARLFAGTTLEQPAGAEPSQDSGVVVALGTVTD
DVMGRLRAGEAASIVLLTATTLGLATCPVTEPLEISATRDAIRDDVFDDVMYPQILLRVGWAPVNADPLPATPRRPLGEL
ATWLDGSVLV

Sequences:

>Translated_330_residues
MTVRSPGTDTLRTALSLANRAPSIHNSQPWHWQVGAHSVHLYVDESLRLAHTDPDARELIVSCGAALNHCAVALTALGWP
PKIRRLPNPDDPSHLASLELHSHPPSESDIALAAAIPRRRTDRRHFSDWPVSMGDIALMGSRAARAGVTMRRVELTPTFR
TTLALAVGQHAADPEYLAELTGWTGRHASTVGVPARNTPESDPTAAVPARLFAGTTLEQPAGAEPSQDSGVVVALGTVTD
DVMGRLRAGEAASIVLLTATTLGLATCPVTEPLEISATRDAIRDDVFDDVMYPQILLRVGWAPVNADPLPATPRRPLGEL
ATWLDGSVLV
>Mature_329_residues
TVRSPGTDTLRTALSLANRAPSIHNSQPWHWQVGAHSVHLYVDESLRLAHTDPDARELIVSCGAALNHCAVALTALGWPP
KIRRLPNPDDPSHLASLELHSHPPSESDIALAAAIPRRRTDRRHFSDWPVSMGDIALMGSRAARAGVTMRRVELTPTFRT
TLALAVGQHAADPEYLAELTGWTGRHASTVGVPARNTPESDPTAAVPARLFAGTTLEQPAGAEPSQDSGVVVALGTVTDD
VMGRLRAGEAASIVLLTATTLGLATCPVTEPLEISATRDAIRDDVFDDVMYPQILLRVGWAPVNADPLPATPRRPLGELA
TWLDGSVLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 35237; Mature: 35106

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRSPGTDTLRTALSLANRAPSIHNSQPWHWQVGAHSVHLYVDESLRLAHTDPDARELI
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCEEEEECCCHHHHHH
VSCGAALNHCAVALTALGWPPKIRRLPNPDDPSHLASLELHSHPPSESDIALAAAIPRRR
HHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHEEEEEECCCCCCCCCEEEEECCCCHH
TDRRHFSDWPVSMGDIALMGSRAARAGVTMRRVELTPTFRTTLALAVGQHAADPEYLAEL
CCCCCCCCCCCCCCCEEEECCCHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHH
TGWTGRHASTVGVPARNTPESDPTAAVPARLFAGTTLEQPAGAEPSQDSGVVVALGTVTD
CCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCH
DVMGRLRAGEAASIVLLTATTLGLATCPVTEPLEISATRDAIRDDVFDDVMYPQILLRVG
HHHHHHCCCCCCEEEEEEEHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
WAPVNADPLPATPRRPLGELATWLDGSVLV
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TVRSPGTDTLRTALSLANRAPSIHNSQPWHWQVGAHSVHLYVDESLRLAHTDPDARELI
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCEEEEECCCHHHHHH
VSCGAALNHCAVALTALGWPPKIRRLPNPDDPSHLASLELHSHPPSESDIALAAAIPRRR
HHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHEEEEEECCCCCCCCCEEEEECCCCHH
TDRRHFSDWPVSMGDIALMGSRAARAGVTMRRVELTPTFRTTLALAVGQHAADPEYLAEL
CCCCCCCCCCCCCCCEEEECCCHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHH
TGWTGRHASTVGVPARNTPESDPTAAVPARLFAGTTLEQPAGAEPSQDSGVVVALGTVTD
CCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCH
DVMGRLRAGEAASIVLLTATTLGLATCPVTEPLEISATRDAIRDDVFDDVMYPQILLRVG
HHHHHHCCCCCCEEEEEEEHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
WAPVNADPLPATPRRPLGELATWLDGSVLV
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]