| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is devS [H]
Identifier: 108798050
GI number: 108798050
Start: 1173934
End: 1175634
Strand: Direct
Name: devS [H]
Synonym: Mmcs_1077
Alternate gene names: 108798050
Gene position: 1173934-1175634 (Clockwise)
Preceding gene: 108798049
Following gene: 108798055
Centisome position: 20.58
GC content: 69.66
Gene sequence:
>1701_bases ATGACCGGGGTCGGGCCGGGCGACCAGTGCAGCGTTCGCCCAATCGGCGAAACGCTGTCGCAGCTGCGGCTGCGTGAGCT GCTCACCGAGGTTCAGGACCGGGTCGAGGAGATCGTCGAGGGCCGGGACCGGCTCGACGGTCTGGTCGACGCGATGCTCA CGGTCACCTCCGGACTCGACCTGGACGCCACCCTGCGCACCATCGTGCACACGGCCATCGAGCTGATCGACGCGCGTTAC GGGGCACTGGGGGTGCGCGGACACGACCACGAGCTGGTCGAGTTCATCTACGAGGGCATCGACGAACCCACCCGGCTGGC GATCGGACCGCTGCCGCAGGGCCGGGGTGTCCTCGGCGTGCTGATCGACGACCCGCAGCCGATCCGGCTGGAAAACATCC ACGACCATCCCGCCTCGGTCGGCTTCCCCGAGCACCACCCCCCGATGCGCACCTTCCTCGGTGTGCCGATCCGGATCCGG GATGAGGTCTTCGGCAACCTGTATCTGTCGGAGAAGACGTCCGGACAACCGTTCAGCGAGGACGACGAGGTGCTGACCCA GGCCCTCGCGGCCGCCGCAGGCATCGCGATCGACAACGCCCGTCTGTTCGAACAGTCCCGCACGCGCCAGGCGTGGATCG AGGCGACCCGCGACATCGCGACCGAGTTGCTCGGCGGCGCTGATCCCGCGCGGGTGTACCGCCTGGTGGCCGAGGAGTCG CTCAAGCTGACCCACGCCGACGTCGCGTTCGTCGCCGTGCCCGCCGACGGTGACGAGCTCGTCATCGCCGACGCCGCCGG GGATACCCGCACGGACCCATCGGTGGCGTCGCTGATCCCGTTGCAGGGCAACGATATCGGTGAGGCGTTCGTGGCGCGGA CACCCCGGCTGGTCGAGGTGATCGCCGCGCAGACCGGCCTGCTCGACGACGCCGGCCCCGCGCTGATCCTGCCGATGAGG ACGACCGAGGCGGTCGCCGGGGTGGTGGTGCTGCTGCGGCGCGCCGGGCGGCCGGCGTTCACCGCCGAGCAGTTGGAGAT GATGGCGGCTTTCGTCGACCAGGCGGCGCTGGCCTGGCAGTCGGCGGTCGCCCAGCGCCGCATCCGCGAACTCGACGTCC TGACCGACCGCGATCGCATCGCCCGCGATCTGCACGATCAGGTGATCCAACGGCTGTTCGGGGTGGGGTTGACGCTGCAG GGCACGATTCCGCGCGCCCGGACGCCGGATGTGCAACGGCGGCTGATCGAATCCGTGGACGATCTGCAGGAGGTGATCCA GCAGATCCGCACGGCCATCTTCGACCTACAGGGCGGGTCGTCGGGCAGCACCCGGTTGCGCCAACGTCTCGACGAGGCCA TCGCCCATCTCGCCGGCGCCGAACTGCGGACGACGGTTCAGTACGTCGGGCCGTTGTCCGTGGTCGGTGCCGAACTCGCC GACCATGCCGAAGCGGTGGTGTCCGAAGCGGTCAGCAACGCCGTGCGTCACGCGCAGGCGACCGAGCTCTCGGTGCTGGT GACGGTGGACGACGATCTGCGGATCGAGATCAGGGACAACGGCGTCGGGATCCCGGACAACCTCACCGAGAGCGGTCTGG CCAACCTGCGCCGGCGCGCCGAAGAGGTCGGCGGTGCTCTCACGATCGAACCCGCCGCCGGAGGCGGTACCTGCCTGAGC TGGACCGCCCCACTGACCTGA
Upstream 100 bases:
>100_bases TCGTCTCCCGCCTCGACCGGTCGGACGGCGCCGCAGAAGGCTGACCGCTTCGTTTCCTGGATACAGTCCCCTGGCTGGTC ATCGGTGTGAGAATGCGCCT
Downstream 100 bases:
>100_bases AAGGCGAACGCGCACCGGGATTCTCGGTCACCCGTAGGGTGCGCCGTCAAGGCACGAGACGACCTCCCGAAGTGGTCGGC GAGGGGTGGGCGGCAGCGGA
Product: GAF sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MTGVGPGDQCSVRPIGETLSQLRLRELLTEVQDRVEEIVEGRDRLDGLVDAMLTVTSGLDLDATLRTIVHTAIELIDARY GALGVRGHDHELVEFIYEGIDEPTRLAIGPLPQGRGVLGVLIDDPQPIRLENIHDHPASVGFPEHHPPMRTFLGVPIRIR DEVFGNLYLSEKTSGQPFSEDDEVLTQALAAAAGIAIDNARLFEQSRTRQAWIEATRDIATELLGGADPARVYRLVAEES LKLTHADVAFVAVPADGDELVIADAAGDTRTDPSVASLIPLQGNDIGEAFVARTPRLVEVIAAQTGLLDDAGPALILPMR TTEAVAGVVVLLRRAGRPAFTAEQLEMMAAFVDQAALAWQSAVAQRRIRELDVLTDRDRIARDLHDQVIQRLFGVGLTLQ GTIPRARTPDVQRRLIESVDDLQEVIQQIRTAIFDLQGGSSGSTRLRQRLDEAIAHLAGAELRTTVQYVGPLSVVGAELA DHAEAVVSEAVSNAVRHAQATELSVLVTVDDDLRIEIRDNGVGIPDNLTESGLANLRRRAEEVGGALTIEPAAGGGTCLS WTAPLT
Sequences:
>Translated_566_residues MTGVGPGDQCSVRPIGETLSQLRLRELLTEVQDRVEEIVEGRDRLDGLVDAMLTVTSGLDLDATLRTIVHTAIELIDARY GALGVRGHDHELVEFIYEGIDEPTRLAIGPLPQGRGVLGVLIDDPQPIRLENIHDHPASVGFPEHHPPMRTFLGVPIRIR DEVFGNLYLSEKTSGQPFSEDDEVLTQALAAAAGIAIDNARLFEQSRTRQAWIEATRDIATELLGGADPARVYRLVAEES LKLTHADVAFVAVPADGDELVIADAAGDTRTDPSVASLIPLQGNDIGEAFVARTPRLVEVIAAQTGLLDDAGPALILPMR TTEAVAGVVVLLRRAGRPAFTAEQLEMMAAFVDQAALAWQSAVAQRRIRELDVLTDRDRIARDLHDQVIQRLFGVGLTLQ GTIPRARTPDVQRRLIESVDDLQEVIQQIRTAIFDLQGGSSGSTRLRQRLDEAIAHLAGAELRTTVQYVGPLSVVGAELA DHAEAVVSEAVSNAVRHAQATELSVLVTVDDDLRIEIRDNGVGIPDNLTESGLANLRRRAEEVGGALTIEPAAGGGTCLS WTAPLT >Mature_565_residues TGVGPGDQCSVRPIGETLSQLRLRELLTEVQDRVEEIVEGRDRLDGLVDAMLTVTSGLDLDATLRTIVHTAIELIDARYG ALGVRGHDHELVEFIYEGIDEPTRLAIGPLPQGRGVLGVLIDDPQPIRLENIHDHPASVGFPEHHPPMRTFLGVPIRIRD EVFGNLYLSEKTSGQPFSEDDEVLTQALAAAAGIAIDNARLFEQSRTRQAWIEATRDIATELLGGADPARVYRLVAEESL KLTHADVAFVAVPADGDELVIADAAGDTRTDPSVASLIPLQGNDIGEAFVARTPRLVEVIAAQTGLLDDAGPALILPMRT TEAVAGVVVLLRRAGRPAFTAEQLEMMAAFVDQAALAWQSAVAQRRIRELDVLTDRDRIARDLHDQVIQRLFGVGLTLQG TIPRARTPDVQRRLIESVDDLQEVIQQIRTAIFDLQGGSSGSTRLRQRLDEAIAHLAGAELRTTVQYVGPLSVVGAELAD HAEAVVSEAVSNAVRHAQATELSVLVTVDDDLRIEIRDNGVGIPDNLTESGLANLRRRAEEVGGALTIEPAAGGGTCLSW TAPLT
Specific function: Member of the two-component regulatory system devR/devS (dosR/dosS) involved in onset of the dormancy response. May act as a redox sensor (rather than a direct hypoxia sensor); the normal (aerobic growth) state is the Fe(3+) form, while the reduced (anaer
COG id: COG2203
COG function: function code T; FOG: GAF domain
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788812, Length=213, Percent_Identity=32.3943661971831, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1787474, Length=261, Percent_Identity=27.2030651340996, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016030 - InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61019; Mature: 60888
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVGPGDQCSVRPIGETLSQLRLRELLTEVQDRVEEIVEGRDRLDGLVDAMLTVTSGLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LDATLRTIVHTAIELIDARYGALGVRGHDHELVEFIYEGIDEPTRLAIGPLPQGRGVLGV HHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEE LIDDPQPIRLENIHDHPASVGFPEHHPPMRTFLGVPIRIRDEVFGNLYLSEKTSGQPFSE EECCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHHHCCEEEECCCCCCCCCC DDEVLTQALAAAAGIAIDNARLFEQSRTRQAWIEATRDIATELLGGADPARVYRLVAEES HHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LKLTHADVAFVAVPADGDELVIADAAGDTRTDPSVASLIPLQGNDIGEAFVARTPRLVEV CEEEECCEEEEEEECCCCEEEEEECCCCCCCCCCHHHEECCCCCCHHHHHHHCCHHHHHH IAAQTGLLDDAGPALILPMRTTEAVAGVVVLLRRAGRPAFTAEQLEMMAAFVDQAALAWQ HHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SAVAQRRIRELDVLTDRDRIARDLHDQVIQRLFGVGLTLQGTIPRARTPDVQRRLIESVD HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHH DLQEVIQQIRTAIFDLQGGSSGSTRLRQRLDEAIAHLAGAELRTTVQYVGPLSVVGAELA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH DHAEAVVSEAVSNAVRHAQATELSVLVTVDDDLRIEIRDNGVGIPDNLTESGLANLRRRA HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHH EEVGGALTIEPAAGGGTCLSWTAPLT HHHCCEEEEEECCCCCCEEECCCCCC >Mature Secondary Structure TGVGPGDQCSVRPIGETLSQLRLRELLTEVQDRVEEIVEGRDRLDGLVDAMLTVTSGLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LDATLRTIVHTAIELIDARYGALGVRGHDHELVEFIYEGIDEPTRLAIGPLPQGRGVLGV HHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEE LIDDPQPIRLENIHDHPASVGFPEHHPPMRTFLGVPIRIRDEVFGNLYLSEKTSGQPFSE EECCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHHHCCEEEECCCCCCCCCC DDEVLTQALAAAAGIAIDNARLFEQSRTRQAWIEATRDIATELLGGADPARVYRLVAEES HHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LKLTHADVAFVAVPADGDELVIADAAGDTRTDPSVASLIPLQGNDIGEAFVARTPRLVEV CEEEECCEEEEEEECCCCEEEEEECCCCCCCCCCHHHEECCCCCCHHHHHHHCCHHHHHH IAAQTGLLDDAGPALILPMRTTEAVAGVVVLLRRAGRPAFTAEQLEMMAAFVDQAALAWQ HHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SAVAQRRIRELDVLTDRDRIARDLHDQVIQRLFGVGLTLQGTIPRARTPDVQRRLIESVD HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHH DLQEVIQQIRTAIFDLQGGSSGSTRLRQRLDEAIAHLAGAELRTTVQYVGPLSVVGAELA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH DHAEAVVSEAVSNAVRHAQATELSVLVTVDDDLRIEIRDNGVGIPDNLTESGLANLRRRA HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHH EEVGGALTIEPAAGGGTCLSWTAPLT HHHCCEEEEEECCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]