Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108797727

Identifier: 108797727

GI number: 108797727

Start: 794280

End: 795017

Strand: Direct

Name: 108797727

Synonym: Mmcs_0748

Alternate gene names: NA

Gene position: 794280-795017 (Clockwise)

Preceding gene: 108797726

Following gene: 108797728

Centisome position: 13.92

GC content: 71.95

Gene sequence:

>738_bases
ATGACCCAGATCGCGATCGTGCTCTACCCCGGCTTCACCGCCCTCGACTTCATCGGCCCCTACGAGGTGCTGCGCAGCCT
GCCCGACACCGAGATCCGTTTCGTCTGGCACGAACCCGGACCCGTCACCGCGGACTCCGGTGTGCTCGTCGTCGGCGCCA
CCCACTCGTTCGACGAGACCCCCTCACCCGACATCGTGCTGGTGCCCGGCGGCCCGACCTCCGGCGAACACGCCCGGGAC
GAGAAGCTGCTCGCCTGGATCCGCGCCGCGCACGCGACCACCACGTGGACGACGTCGGTGTGCACGGGGTCGATGATCCT
CGCCGCGGCCGGGGTGCTCGACGGCAGGCGCGCCACCTCCCACTGGATGGCGGTCCCGCTGCTCAAGCCCTTCGGTGTCA
CCCCCGTCGGTGACGAACGCGTGGTGCGGGACGGCAAGGTCGTCACCGCCGCGGGCGTCTCGGCGGGCCTCGACTTCGCG
CTGTGGCTGTCCGCGCAGCTCGCCGGCGAGGCGCAGGCCAAGGTCCGGCAGCTCATCCTCGAGTACGACCCGCAGCCGCC
GTTCGACTCCGGCCATGTGTCGAAAGCGTCGGCCGTGACGAAGGCCGCCGCCACCGCGGCGCTGGGCAAGGACACCTTCG
TCACCCACCGCCAGCTCGCGCCGTCGGCGAAGCTGCTGTGGGACACCGCGCTGCAGGCCGTCCGCGCGCGCAACCACCGC
CGGAAGGCGTCTGCCTAG

Upstream 100 bases:

>100_bases
GCTTCGGAACCGCAGAGACCATGCGCCGCAACTTCATCCGACGACTCGGCGTCTCACCCGATCACTACCGCAAGACGTTC
ACCGCCTGAGAGGACCGCCC

Downstream 100 bases:

>100_bases
GATCTGCCGCATGGGTATACCCGAGGTGGATCCGACCGCCGGCTCGCCGATGCTGAAAGTCGGTGCCAGGCTGCTGCGCC
CCCGGCCGGTGCGCTATCTG

Product: ThiJ/PfpI

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; Transcriptional Regulator; ThiJ/PfpI Family Protein; AraC Family Transcriptional Regulator; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; AraC/XylS Family Transcriptional Regulator; Intracellular Protease/Amidase Protein; Transcriptional Regulatory Protein; AraC Family Transcription Regulator; Thij/Pfpi Family Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; AraC Family Transcription Regulator Protein; Transcriptional Regulator ThiJ/PfpI Family Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTQIAIVLYPGFTALDFIGPYEVLRSLPDTEIRFVWHEPGPVTADSGVLVVGATHSFDETPSPDIVLVPGGPTSGEHARD
EKLLAWIRAAHATTTWTTSVCTGSMILAAAGVLDGRRATSHWMAVPLLKPFGVTPVGDERVVRDGKVVTAAGVSAGLDFA
LWLSAQLAGEAQAKVRQLILEYDPQPPFDSGHVSKASAVTKAAATAALGKDTFVTHRQLAPSAKLLWDTALQAVRARNHR
RKASA

Sequences:

>Translated_245_residues
MTQIAIVLYPGFTALDFIGPYEVLRSLPDTEIRFVWHEPGPVTADSGVLVVGATHSFDETPSPDIVLVPGGPTSGEHARD
EKLLAWIRAAHATTTWTTSVCTGSMILAAAGVLDGRRATSHWMAVPLLKPFGVTPVGDERVVRDGKVVTAAGVSAGLDFA
LWLSAQLAGEAQAKVRQLILEYDPQPPFDSGHVSKASAVTKAAATAALGKDTFVTHRQLAPSAKLLWDTALQAVRARNHR
RKASA
>Mature_244_residues
TQIAIVLYPGFTALDFIGPYEVLRSLPDTEIRFVWHEPGPVTADSGVLVVGATHSFDETPSPDIVLVPGGPTSGEHARDE
KLLAWIRAAHATTTWTTSVCTGSMILAAAGVLDGRRATSHWMAVPLLKPFGVTPVGDERVVRDGKVVTAAGVSAGLDFAL
WLSAQLAGEAQAKVRQLILEYDPQPPFDSGHVSKASAVTKAAATAALGKDTFVTHRQLAPSAKLLWDTALQAVRARNHRR
KASA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26034; Mature: 25903

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIAIVLYPGFTALDFIGPYEVLRSLPDTEIRFVWHEPGPVTADSGVLVVGATHSFDET
CCEEEEEEECCCHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCC
PSPDIVLVPGGPTSGEHARDEKLLAWIRAAHATTTWTTSVCTGSMILAAAGVLDGRRATS
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCC
HWMAVPLLKPFGVTPVGDERVVRDGKVVTAAGVSAGLDFALWLSAQLAGEAQAKVRQLIL
CEEEEECCCCCCCCCCCCCCEECCCCEEEECCCCCCCCEEEEHHHHHCCHHHHHHHHHHH
EYDPQPPFDSGHVSKASAVTKAAATAALGKDTFVTHRQLAPSAKLLWDTALQAVRARNHR
HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RKASA
HCCCC
>Mature Secondary Structure 
TQIAIVLYPGFTALDFIGPYEVLRSLPDTEIRFVWHEPGPVTADSGVLVVGATHSFDET
CEEEEEEECCCHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCC
PSPDIVLVPGGPTSGEHARDEKLLAWIRAAHATTTWTTSVCTGSMILAAAGVLDGRRATS
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCC
HWMAVPLLKPFGVTPVGDERVVRDGKVVTAAGVSAGLDFALWLSAQLAGEAQAKVRQLIL
CEEEEECCCCCCCCCCCCCCEECCCCEEEECCCCCCCCEEEEHHHHHCCHHHHHHHHHHH
EYDPQPPFDSGHVSKASAVTKAAATAALGKDTFVTHRQLAPSAKLLWDTALQAVRARNHR
HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RKASA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA