| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is gpmA [H]
Identifier: 108797639
GI number: 108797639
Start: 720299
End: 721045
Strand: Direct
Name: gpmA [H]
Synonym: Mmcs_0659
Alternate gene names: 108797639
Gene position: 720299-721045 (Clockwise)
Preceding gene: 108797638
Following gene: 108797640
Centisome position: 12.62
GC content: 68.27
Gene sequence:
>747_bases ATGGGAGATTCCACGCTGATCCTGCTTCGTCACGGCGAAAGTGAATGGAACGCGAAGAACCTGTTCACCGGGTGGGTCGA CGTCGACCTGACCGACAAGGGCCGGGCCGAGGCCACGCGGGCGGGTGAGCTGATCGCCGATCTGGACCGGTTGCCCGACG TGCTGTACACCTCGCTGCTGCGGCGCGCGATCACCACGGCCAACATCGCGTTGGACAAGGCGGACCGGCACTGGATCCCG GTGCACCGGGACTGGCGGCTCAACGAGCGGCACTACGGGGCGCTGCAGGGGCTGAACAAGGCCGAGACCAAAGAGAAGTA CGGCGAGGAGCAGTTCATGGCCTGGCGGCGCAGCTACGACACCCCGCCGCCGCCGATCGAGGCCGGCAGCGAGTACAGCC AGGACCGCGATCCGCGCTACGCCGACATCGACGGCGGACCGCTCACCGAATGCCTGGCCGACGTGGTGGCCCGCTTCGTG CCCTACTTCGAGCAGACGATCGTGCCGGATCTGCGCGAGGGCAGGACCGTGCTGATCGCCGCGCACGGCAACTCACTGCG TGCGCTGGTCAAGTACCTCGACGGCATGTCCGACGAGGACGTGGTCGGGCTGAACATCCCGACCGGCATACCGCTGCGCT ACGACCTGGACTCCGATCTGAAGCCGACGGTGGCAGGCGGCACGTACCTCGATCCGGAGGCCGCGGCGGCCGGCGCGGCG GCCGTGGCATCCCAGGGCGCGAAGTAA
Upstream 100 bases:
>100_bases CGCGCGGCGAATCGCTGAAGAATCTGCGCGCCTTCGAGCACCTCATCGACGACGACTGACGGCTCGGGTGCAACCACCGC CCCCGTGAGAAGATTCAGCC
Downstream 100 bases:
>100_bases GGGCCCCGAATCGAGGGGGCCAACACAAACACGCGGTGAACTGCGGCCGAACTCCTGCGATTCGCGGTGTGACTTGTCTC GATTTGGCCGCACGCTGCTG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MGDSTLILLRHGESEWNAKNLFTGWVDVDLTDKGRAEATRAGELIADLDRLPDVLYTSLLRRAITTANIALDKADRHWIP VHRDWRLNERHYGALQGLNKAETKEKYGEEQFMAWRRSYDTPPPPIEAGSEYSQDRDPRYADIDGGPLTECLADVVARFV PYFEQTIVPDLREGRTVLIAAHGNSLRALVKYLDGMSDEDVVGLNIPTGIPLRYDLDSDLKPTVAGGTYLDPEAAAAGAA AVASQGAK
Sequences:
>Translated_248_residues MGDSTLILLRHGESEWNAKNLFTGWVDVDLTDKGRAEATRAGELIADLDRLPDVLYTSLLRRAITTANIALDKADRHWIP VHRDWRLNERHYGALQGLNKAETKEKYGEEQFMAWRRSYDTPPPPIEAGSEYSQDRDPRYADIDGGPLTECLADVVARFV PYFEQTIVPDLREGRTVLIAAHGNSLRALVKYLDGMSDEDVVGLNIPTGIPLRYDLDSDLKPTVAGGTYLDPEAAAAGAA AVASQGAK >Mature_247_residues GDSTLILLRHGESEWNAKNLFTGWVDVDLTDKGRAEATRAGELIADLDRLPDVLYTSLLRRAITTANIALDKADRHWIPV HRDWRLNERHYGALQGLNKAETKEKYGEEQFMAWRRSYDTPPPPIEAGSEYSQDRDPRYADIDGGPLTECLADVVARFVP YFEQTIVPDLREGRTVLIAAHGNSLRALVKYLDGMSDEDVVGLNIPTGIPLRYDLDSDLKPTVAGGTYLDPEAAAAGAAA VASQGAK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=250, Percent_Identity=49.6, Blast_Score=253, Evalue=9e-68, Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=49.6, Blast_Score=234, Evalue=5e-62, Organism=Homo sapiens, GI4502445, Length=252, Percent_Identity=43.6507936507937, Blast_Score=223, Evalue=9e-59, Organism=Homo sapiens, GI40353764, Length=252, Percent_Identity=43.6507936507937, Blast_Score=223, Evalue=9e-59, Organism=Homo sapiens, GI71274132, Length=250, Percent_Identity=47.2, Blast_Score=221, Evalue=6e-58, Organism=Homo sapiens, GI310129614, Length=165, Percent_Identity=49.6969696969697, Blast_Score=147, Evalue=8e-36, Organism=Escherichia coli, GI1786970, Length=224, Percent_Identity=54.0178571428571, Blast_Score=254, Evalue=6e-69, Organism=Saccharomyces cerevisiae, GI6322697, Length=245, Percent_Identity=64.0816326530612, Blast_Score=296, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6320183, Length=297, Percent_Identity=33.6700336700337, Blast_Score=163, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6324516, Length=291, Percent_Identity=32.9896907216495, Blast_Score=161, Evalue=1e-40, Organism=Drosophila melanogaster, GI24646216, Length=250, Percent_Identity=49.2, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI85725270, Length=250, Percent_Identity=47.6, Blast_Score=227, Evalue=6e-60, Organism=Drosophila melanogaster, GI85725272, Length=250, Percent_Identity=47.6, Blast_Score=227, Evalue=6e-60, Organism=Drosophila melanogaster, GI24650981, Length=250, Percent_Identity=47.6, Blast_Score=227, Evalue=6e-60, Organism=Drosophila melanogaster, GI28571815, Length=247, Percent_Identity=38.0566801619433, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI28571817, Length=247, Percent_Identity=38.0566801619433, Blast_Score=161, Evalue=3e-40, Organism=Drosophila melanogaster, GI24648979, Length=247, Percent_Identity=38.0566801619433, Blast_Score=161, Evalue=3e-40,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 27378; Mature: 27247
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSTLILLRHGESEWNAKNLFTGWVDVDLTDKGRAEATRAGELIADLDRLPDVLYTSLL CCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RRAITTANIALDKADRHWIPVHRDWRLNERHYGALQGLNKAETKEKYGEEQFMAWRRSYD HHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHCCC TPPPPIEAGSEYSQDRDPRYADIDGGPLTECLADVVARFVPYFEQTIVPDLREGRTVLIA CCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE AHGNSLRALVKYLDGMSDEDVVGLNIPTGIPLRYDLDSDLKPTVAGGTYLDPEAAAAGAA ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCCEECCCCEECHHHHHHHHH AVASQGAK HHHHCCCC >Mature Secondary Structure GDSTLILLRHGESEWNAKNLFTGWVDVDLTDKGRAEATRAGELIADLDRLPDVLYTSLL CCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RRAITTANIALDKADRHWIPVHRDWRLNERHYGALQGLNKAETKEKYGEEQFMAWRRSYD HHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHCCC TPPPPIEAGSEYSQDRDPRYADIDGGPLTECLADVVARFVPYFEQTIVPDLREGRTVLIA CCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE AHGNSLRALVKYLDGMSDEDVVGLNIPTGIPLRYDLDSDLKPTVAGGTYLDPEAAAAGAA ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCCEECCCCEECHHHHHHHHH AVASQGAK HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA