| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797150
Identifier: 108797150
GI number: 108797150
Start: 185252
End: 186580
Strand: Reverse
Name: 108797150
Synonym: Mmcs_0170
Alternate gene names: NA
Gene position: 186580-185252 (Counterclockwise)
Preceding gene: 108797151
Following gene: 108797148
Centisome position: 3.27
GC content: 69.15
Gene sequence:
>1329_bases ATGGATGGATTGTCTGGCGCGGTCGACCACCTCGTGGCGTCCATCGCCGCTATGCAAACCGCCTCCATCGACGAGCTCTC CCACGAACAGATCGTGGCCGAACTGGACCGCATCAAAGCAGCGGTGTGGGCGGTCCCCAGCGTGGAGCACCGCCTGACCG CGCGGCTGATGGACGCCGACCCCCATGAACTCGGGGCGACGTCGTTGAAGAGGCTGCTCGCCGACCGGCTCCGCATCTCC GACAAGACCGCCGGCGAGCGGCTCACCGACGCCCGCCAGTTGGGGCCGCGCCACACCCTGACCGGTGAGCGGGTGCAGAC CGAACTGGCCCACACCGCGGATGCGGTCGCCCGCGGCGACATCGGCACCGCCCACGTGCGCATCATCCAGGACTTCGTCA AGAAACTCCCGGCATGGGTGTCCTGGGACCGGCGCGAGGACTACGAACGCGACCTCGTCGGTCATGCGGTGGCGTTGCGG CCCGAGGACTTCCGCAAGGTCGCCGACACCCTGCTGGGGTTCATCGATCAGGACGGCACCGAACCCGACCACCACACCCA CCAACGCCGCCGTGAATTCACCGTCGGACGCCAGCAGGCCGACGGGATGAGCCGCGTTCAGGGCTGGCTCACCCCCGAAG CCCGCGCCTACTGGGATGTCATCGCCGCCAAATACGCCGCCCCCGGCACCAGCGTGCCCCACGACGACGCCGTCACCGGC CGCGACGACCGCACCACCGGCCAACGCCACCACGACGCCCTCACCCGAGCGATGCGCCACACCGTCGAATCCGGCTCCCT CGGCCACGTCGCCGGGGTACCGGCCACCATCGTGGCCACCACCACCATCAACGAGTTGGAACGCGCCGCCGGGTGGGCGC ACACCGGCGGCGGCAACCGCCTACCGATCCGCGACCTGATCCGGATGGCCGCCGAGTCGCGGCACTACCTGGCAGTCTTC GACGACCACACCGAAGAAATCCTCTACCTCGGCCGGGCGAAACGCTGCGCCACCACCGCCCAACGGTTGGCGTTGTTCGC CCGCGACAAGGGCTGCACCCACCCCCACTGCACCGTGCCGTTCTACTGGACCGAAGCCCACCACACCCGCGACTACGCCC AGGGTGGGTGCACCGACATCGACGACCTCACCCTGGCCTGTCAACCCGCCAACCTGCTCATCGAGAAGACCGGGTGGACC ACCCACCGCCCCGGCAACGGCCGCACCCAATGGACCCCACCCACCAACCAGGACACCGGCCAACCCCGCATCAACCACCA CTTCCACCCGCAGCGCTACCTCACCGACAACGACGACGAACCCGGGTAG
Upstream 100 bases:
>100_bases TGCGCACACTCGCGAACGCGGCGAAACCTCTGTCGTCACAGTGGTTTCGGTGGTCACAACCTCAGCGGTTTTGTCGGACC CTCGAACTAGTGTTCGATGC
Downstream 100 bases:
>100_bases CTAGTCGACCTTCTCCTCGACGTCGTCGGGCTCGGCCTGGATGCGCGGCCCTTCGTCGGCCTCGAGGTTCTCGACCGCGG CCGACTGGTCGCGGGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MDGLSGAVDHLVASIAAMQTASIDELSHEQIVAELDRIKAAVWAVPSVEHRLTARLMDADPHELGATSLKRLLADRLRIS DKTAGERLTDARQLGPRHTLTGERVQTELAHTADAVARGDIGTAHVRIIQDFVKKLPAWVSWDRREDYERDLVGHAVALR PEDFRKVADTLLGFIDQDGTEPDHHTHQRRREFTVGRQQADGMSRVQGWLTPEARAYWDVIAAKYAAPGTSVPHDDAVTG RDDRTTGQRHHDALTRAMRHTVESGSLGHVAGVPATIVATTTINELERAAGWAHTGGGNRLPIRDLIRMAAESRHYLAVF DDHTEEILYLGRAKRCATTAQRLALFARDKGCTHPHCTVPFYWTEAHHTRDYAQGGCTDIDDLTLACQPANLLIEKTGWT THRPGNGRTQWTPPTNQDTGQPRINHHFHPQRYLTDNDDEPG
Sequences:
>Translated_442_residues MDGLSGAVDHLVASIAAMQTASIDELSHEQIVAELDRIKAAVWAVPSVEHRLTARLMDADPHELGATSLKRLLADRLRIS DKTAGERLTDARQLGPRHTLTGERVQTELAHTADAVARGDIGTAHVRIIQDFVKKLPAWVSWDRREDYERDLVGHAVALR PEDFRKVADTLLGFIDQDGTEPDHHTHQRRREFTVGRQQADGMSRVQGWLTPEARAYWDVIAAKYAAPGTSVPHDDAVTG RDDRTTGQRHHDALTRAMRHTVESGSLGHVAGVPATIVATTTINELERAAGWAHTGGGNRLPIRDLIRMAAESRHYLAVF DDHTEEILYLGRAKRCATTAQRLALFARDKGCTHPHCTVPFYWTEAHHTRDYAQGGCTDIDDLTLACQPANLLIEKTGWT THRPGNGRTQWTPPTNQDTGQPRINHHFHPQRYLTDNDDEPG >Mature_442_residues MDGLSGAVDHLVASIAAMQTASIDELSHEQIVAELDRIKAAVWAVPSVEHRLTARLMDADPHELGATSLKRLLADRLRIS DKTAGERLTDARQLGPRHTLTGERVQTELAHTADAVARGDIGTAHVRIIQDFVKKLPAWVSWDRREDYERDLVGHAVALR PEDFRKVADTLLGFIDQDGTEPDHHTHQRRREFTVGRQQADGMSRVQGWLTPEARAYWDVIAAKYAAPGTSVPHDDAVTG RDDRTTGQRHHDALTRAMRHTVESGSLGHVAGVPATIVATTTINELERAAGWAHTGGGNRLPIRDLIRMAAESRHYLAVF DDHTEEILYLGRAKRCATTAQRLALFARDKGCTHPHCTVPFYWTEAHHTRDYAQGGCTDIDDLTLACQPANLLIEKTGWT THRPGNGRTQWTPPTNQDTGQPRINHHFHPQRYLTDNDDEPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 49177; Mature: 49177
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGLSGAVDHLVASIAAMQTASIDELSHEQIVAELDRIKAAVWAVPSVEHRLTARLMDAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC PHELGATSLKRLLADRLRISDKTAGERLTDARQLGPRHTLTGERVQTELAHTADAVARGD HHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC IGTAHVRIIQDFVKKLPAWVSWDRREDYERDLVGHAVALRPEDFRKVADTLLGFIDQDGT CCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCC EPDHHTHQRRREFTVGRQQADGMSRVQGWLTPEARAYWDVIAAKYAAPGTSVPHDDAVTG CCCHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC RDDRTTGQRHHDALTRAMRHTVESGSLGHVAGVPATIVATTTINELERAAGWAHTGGGNR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC LPIRDLIRMAAESRHYLAVFDDHTEEILYLGRAKRCATTAQRLALFARDKGCTHPHCTVP CCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEE FYWTEAHHTRDYAQGGCTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTQWTPPTNQDTG EEECCCHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC QPRINHHFHPQRYLTDNDDEPG CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDGLSGAVDHLVASIAAMQTASIDELSHEQIVAELDRIKAAVWAVPSVEHRLTARLMDAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC PHELGATSLKRLLADRLRISDKTAGERLTDARQLGPRHTLTGERVQTELAHTADAVARGD HHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC IGTAHVRIIQDFVKKLPAWVSWDRREDYERDLVGHAVALRPEDFRKVADTLLGFIDQDGT CCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCC EPDHHTHQRRREFTVGRQQADGMSRVQGWLTPEARAYWDVIAAKYAAPGTSVPHDDAVTG CCCHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC RDDRTTGQRHHDALTRAMRHTVESGSLGHVAGVPATIVATTTINELERAAGWAHTGGGNR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC LPIRDLIRMAAESRHYLAVFDDHTEEILYLGRAKRCATTAQRLALFARDKGCTHPHCTVP CCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEE FYWTEAHHTRDYAQGGCTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTQWTPPTNQDTG EEECCCHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC QPRINHHFHPQRYLTDNDDEPG CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]