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The map label for this gene is ygfF [C]

Identifier: 108797083

GI number: 108797083

Start: 117241

End: 117927

Strand: Reverse

Name: ygfF [C]

Synonym: Mmcs_0102

Alternate gene names: 108797083

Gene position: 117927-117241 (Counterclockwise)

Preceding gene: 108797088

Following gene: 108797082

Centisome position: 2.07

GC content: 70.89

Gene sequence:

>687_bases
ATGCACCATGGACCCGAACGGATCGTCCTGATCACGGGTGCCTCAGGGGGCATCGGCGCCGAGGTCGCCCGGCATCTCGC
CGGCCCCGACACCCACGTCGTAGTCCACTACCGCGAGCACTCCGGCGCCGCGGACGCTGTCGCGGGCGCCATCCGCGACG
CGGGTGGTCGCGCGTCCACGCTGGGCGCCGACATCTCCGACGAAGCGGAGGCGGCGACGCTGATGGACTCCGTCGCGGCG
AGCTTCGGACGTCTGGACGCGCTGGTCCTCAACACGGCGAGCCGGGCCGAACTCGGCGCCGACCCCCGGTACGCCATGCG
CCTCAACCGCGATGCGCAGCGTCGCCTCGCCCAGTTGGCCGTGCCTCTGATGCCGGCAGGCGCCCGCATCGTGTTCGTCA
CCAGCCATCAGGCGCACTTCTTCCCGAACAAGGCGGTGCCCAAGGGGTACGTCGCCGTCGCGGCGAGCAAGCGCGCCGGG
GAGACCGCCCTGTACGGGATGCGTTCGGTCCTCGCCCATGCCGGCATCCACCTCACCGTGGTCTCCGGTGACCGGATCGA
CGGTCCGACGTTGCGCCCGCTGCCGACCGCCGACGAGTTCGCCGAGGCGATCGTGGGCGCGACCCGAACCCCGTTCCCCC
CGAGCATCGTCTACGTTGGTAAGACCGACTATCTGATGACCGCCTGA

Upstream 100 bases:

>100_bases
ACCGCAGCATAAGCTGCCTTACCGTTACCTTATCTTTTCCTTAACTTCCTTAATCCGGGTGTACGGTGGCTGCATCGCTC
GGTCGAGGAAGGAGCCAGAC

Downstream 100 bases:

>100_bases
CCGGCGGCGAGGGCGGCCACGCATTCCGCTCCCGCGGATGCCAAACTGTGCCGATGCTCATCGCGATACCGCGCGAGTCT
CAGCCCGGCGAGACACGCGT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: ORFC [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MHHGPERIVLITGASGGIGAEVARHLAGPDTHVVVHYREHSGAADAVAGAIRDAGGRASTLGADISDEAEAATLMDSVAA
SFGRLDALVLNTASRAELGADPRYAMRLNRDAQRRLAQLAVPLMPAGARIVFVTSHQAHFFPNKAVPKGYVAVAASKRAG
ETALYGMRSVLAHAGIHLTVVSGDRIDGPTLRPLPTADEFAEAIVGATRTPFPPSIVYVGKTDYLMTA

Sequences:

>Translated_228_residues
MHHGPERIVLITGASGGIGAEVARHLAGPDTHVVVHYREHSGAADAVAGAIRDAGGRASTLGADISDEAEAATLMDSVAA
SFGRLDALVLNTASRAELGADPRYAMRLNRDAQRRLAQLAVPLMPAGARIVFVTSHQAHFFPNKAVPKGYVAVAASKRAG
ETALYGMRSVLAHAGIHLTVVSGDRIDGPTLRPLPTADEFAEAIVGATRTPFPPSIVYVGKTDYLMTA
>Mature_228_residues
MHHGPERIVLITGASGGIGAEVARHLAGPDTHVVVHYREHSGAADAVAGAIRDAGGRASTLGADISDEAEAATLMDSVAA
SFGRLDALVLNTASRAELGADPRYAMRLNRDAQRRLAQLAVPLMPAGARIVFVTSHQAHFFPNKAVPKGYVAVAASKRAG
ETALYGMRSVLAHAGIHLTVVSGDRIDGPTLRPLPTADEFAEAIVGATRTPFPPSIVYVGKTDYLMTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 23791; Mature: 23791

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHGPERIVLITGASGGIGAEVARHLAGPDTHVVVHYREHSGAADAVAGAIRDAGGRAST
CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEE
LGADISDEAEAATLMDSVAASFGRLDALVLNTASRAELGADPRYAMRLNRDAQRRLAQLA
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCHHEEEECHHHHHHHHHHH
VPLMPAGARIVFVTSHQAHFFPNKAVPKGYVAVAASKRAGETALYGMRSVLAHAGIHLTV
CCCCCCCCEEEEEECCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEE
VSGDRIDGPTLRPLPTADEFAEAIVGATRTPFPPSIVYVGKTDYLMTA
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEC
>Mature Secondary Structure
MHHGPERIVLITGASGGIGAEVARHLAGPDTHVVVHYREHSGAADAVAGAIRDAGGRAST
CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEE
LGADISDEAEAATLMDSVAASFGRLDALVLNTASRAELGADPRYAMRLNRDAQRRLAQLA
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCHHEEEECHHHHHHHHHHH
VPLMPAGARIVFVTSHQAHFFPNKAVPKGYVAVAASKRAGETALYGMRSVLAHAGIHLTV
CCCCCCCCEEEEEECCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEE
VSGDRIDGPTLRPLPTADEFAEAIVGATRTPFPPSIVYVGKTDYLMTA
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868443 [H]