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The map label for this gene is bbsG [H]

Identifier: 108797079

GI number: 108797079

Start: 111714

End: 113015

Strand: Reverse

Name: bbsG [H]

Synonym: Mmcs_0098

Alternate gene names: 108797079

Gene position: 113015-111714 (Counterclockwise)

Preceding gene: 108797080

Following gene: 108797078

Centisome position: 1.98

GC content: 68.2

Gene sequence:

>1302_bases
ATGGAACGTCGGGCTCTCGGTCACCGACAGTGGCCCGGCGGACCGTCTGCGTGGGCATCGTCATATCGTGACGGCATGGA
CTTCGCGATGTCGGCCAAGGCGCTCGACTACCACCAGCGGCTCACCGATTTCATGGTCGAGCACGTCTTCCCCGCCGAGG
CGGACTACCACCGTTACCGCGAGGAGGCCGGACCGAAGGACCACACGGTCCCGCCGGTCGTCGAGGACCTCAAGAAGCTG
GCCAAGGAACGCGGCCTGTGGAACCTATTCCTGCCGTCGGAATCCGGGTTGTCCAACCTGGAGTACGCGGAACTGGCCGA
ACTGTCCGGGTGGAGCATGGAGATCGCCCCCGAGGTGATCAACTGTGCCGCCCCCGACACCGGCAACATGGAGACGCTGC
ACCTCTTCGCCAACGATGAGCAGCGCAAGCAGTGGCTCGACCCGCTGCTGAACGGCGAGATCCGCAGCGCGTTCGCGATG
ACCGAACCGGCCGTCGCCTCCTCCGACGCCCGCAACATCGAGACGACGATGCTGCGTGACGGATCCGACTACGTGATCAA
CGGCCGCAAGTGGTGGATCACCGGCGCGGCCGATCCGCGCTGCAAGCTCCTCATCGTGATGGGCCGCACCAACCCGGATG
CGGCCAGCCATCAGCAGCAGTCGATGATCCTGGTGCCCGCCGACACCCCCGGCGTCGACATCCAGCGGTCGCTTCCCGTG
TTCGGCTGGCAGGACCAGCACGGCCACTGCGAGATCGTGTTCGACAACGTCCGCGTGCCCGTCGAGAACCTGCTGCACGA
AGAGGGCAGCGGTTTCGCGATCGCCCAGGCCCGGCTCGGCCCGGGCCGCATCCACCACTGCATGCGGGCCCTCGGTGCCG
CCGAGCGGGCGCTGGCGCTGATGATCGACCGCGTCCAGAAGCGGGTGGCCTTCGGCAAGCCGCTGGCCGAACAGGGTGTG
GTGCGCGAGGCGATTGCCAAGTCCCGCAACGAGATCGACATGGCCCGGCTGCTGTGCCACAAGGCGGCGTGGACCATCGA
CCAGGAGGGCAACAAGGCCGCGCACGTGCTGGTGTCGCAGATCAAGTCGGTGGCCCCGCAGGTCGCCTGCGACGTCATCG
ACCGCGCGATCCAGGTGCACGGTGGGGCCGGGGTGTCCGACGACTTCCCGCTGGCCCGGCTCTACGCGTGGCACCGCGCG
ATGCGGCTGTTCGACGGCCCCGACGAGGTGCACATGCGGACCATCGCGCGCGCCGAACTGGGCCGCGAGAAGTCCCCGTT
CGCAGCCGCGGTGTGCCGCTAG

Upstream 100 bases:

>100_bases
GATTCAGCGGCTGGTCATCTCGCGCTCGCTCACGGCACGCTGAGCCGTTCGCCGTAGCAGACCCGCTCGAAGCCGTCCTG
GCGTCCGCGGCCGGCCGCGG

Downstream 100 bases:

>100_bases
TGGCCTCGGCCGGCGACGAACTGTCGGGCGCGTGGAACTTCCGCGACGTCTCCTCGCACACGGGCGTCGCCCCCGGGGTG
TTCTTCCGCGCCAGTGAGCT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MERRALGHRQWPGGPSAWASSYRDGMDFAMSAKALDYHQRLTDFMVEHVFPAEADYHRYREEAGPKDHTVPPVVEDLKKL
AKERGLWNLFLPSESGLSNLEYAELAELSGWSMEIAPEVINCAAPDTGNMETLHLFANDEQRKQWLDPLLNGEIRSAFAM
TEPAVASSDARNIETTMLRDGSDYVINGRKWWITGAADPRCKLLIVMGRTNPDAASHQQQSMILVPADTPGVDIQRSLPV
FGWQDQHGHCEIVFDNVRVPVENLLHEEGSGFAIAQARLGPGRIHHCMRALGAAERALALMIDRVQKRVAFGKPLAEQGV
VREAIAKSRNEIDMARLLCHKAAWTIDQEGNKAAHVLVSQIKSVAPQVACDVIDRAIQVHGGAGVSDDFPLARLYAWHRA
MRLFDGPDEVHMRTIARAELGREKSPFAAAVCR

Sequences:

>Translated_433_residues
MERRALGHRQWPGGPSAWASSYRDGMDFAMSAKALDYHQRLTDFMVEHVFPAEADYHRYREEAGPKDHTVPPVVEDLKKL
AKERGLWNLFLPSESGLSNLEYAELAELSGWSMEIAPEVINCAAPDTGNMETLHLFANDEQRKQWLDPLLNGEIRSAFAM
TEPAVASSDARNIETTMLRDGSDYVINGRKWWITGAADPRCKLLIVMGRTNPDAASHQQQSMILVPADTPGVDIQRSLPV
FGWQDQHGHCEIVFDNVRVPVENLLHEEGSGFAIAQARLGPGRIHHCMRALGAAERALALMIDRVQKRVAFGKPLAEQGV
VREAIAKSRNEIDMARLLCHKAAWTIDQEGNKAAHVLVSQIKSVAPQVACDVIDRAIQVHGGAGVSDDFPLARLYAWHRA
MRLFDGPDEVHMRTIARAELGREKSPFAAAVCR
>Mature_433_residues
MERRALGHRQWPGGPSAWASSYRDGMDFAMSAKALDYHQRLTDFMVEHVFPAEADYHRYREEAGPKDHTVPPVVEDLKKL
AKERGLWNLFLPSESGLSNLEYAELAELSGWSMEIAPEVINCAAPDTGNMETLHLFANDEQRKQWLDPLLNGEIRSAFAM
TEPAVASSDARNIETTMLRDGSDYVINGRKWWITGAADPRCKLLIVMGRTNPDAASHQQQSMILVPADTPGVDIQRSLPV
FGWQDQHGHCEIVFDNVRVPVENLLHEEGSGFAIAQARLGPGRIHHCMRALGAAERALALMIDRVQKRVAFGKPLAEQGV
VREAIAKSRNEIDMARLLCHKAAWTIDQEGNKAAHVLVSQIKSVAPQVACDVIDRAIQVHGGAGVSDDFPLARLYAWHRA
MRLFDGPDEVHMRTIARAELGREKSPFAAAVCR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=427, Percent_Identity=52.6932084309134, Blast_Score=424, Evalue=1e-119,
Organism=Homo sapiens, GI48976061, Length=427, Percent_Identity=52.6932084309134, Blast_Score=424, Evalue=1e-119,
Organism=Homo sapiens, GI38505218, Length=412, Percent_Identity=50.7281553398058, Blast_Score=405, Evalue=1e-113,
Organism=Homo sapiens, GI4557231, Length=406, Percent_Identity=26.3546798029557, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI187960098, Length=406, Percent_Identity=26.3546798029557, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI21361497, Length=383, Percent_Identity=28.1984334203655, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI4557233, Length=428, Percent_Identity=28.9719626168224, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI7656849, Length=352, Percent_Identity=29.8295454545455, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4501859, Length=281, Percent_Identity=28.8256227758007, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI76496475, Length=419, Percent_Identity=26.9689737470167, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI4557235, Length=380, Percent_Identity=27.8947368421053, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4501857, Length=391, Percent_Identity=27.1099744245524, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI226958412, Length=391, Percent_Identity=25.5754475703325, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI226958414, Length=372, Percent_Identity=25.8064516129032, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4503943, Length=294, Percent_Identity=27.5510204081633, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI7669494, Length=266, Percent_Identity=28.1954887218045, Blast_Score=82, Evalue=8e-16,
Organism=Escherichia coli, GI87081958, Length=401, Percent_Identity=28.428927680798, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1786223, Length=361, Percent_Identity=25.4847645429363, Blast_Score=96, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17562446, Length=403, Percent_Identity=48.8833746898263, Blast_Score=368, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI17534899, Length=353, Percent_Identity=29.4617563739377, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17570075, Length=405, Percent_Identity=26.6666666666667, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI71985184, Length=338, Percent_Identity=30.7692307692308, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17569725, Length=361, Percent_Identity=26.0387811634349, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17508101, Length=287, Percent_Identity=30.3135888501742, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17538396, Length=352, Percent_Identity=28.6931818181818, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=267, Percent_Identity=29.5880149812734, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17551932, Length=357, Percent_Identity=27.4509803921569, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17505929, Length=313, Percent_Identity=28.7539936102236, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=367, Percent_Identity=25.6130790190736, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71985192, Length=276, Percent_Identity=29.7101449275362, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI71990804, Length=208, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=188, Percent_Identity=27.6595744680851, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=303, Percent_Identity=26.0726072607261, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=188, Percent_Identity=27.6595744680851, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356377, Length=343, Percent_Identity=31.7784256559767, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24660351, Length=399, Percent_Identity=28.5714285714286, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24646207, Length=378, Percent_Identity=29.3650793650794, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24666513, Length=282, Percent_Identity=30.4964539007092, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281363737, Length=341, Percent_Identity=26.9794721407625, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21355753, Length=279, Percent_Identity=25.4480286738351, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 48143; Mature: 48143

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRALGHRQWPGGPSAWASSYRDGMDFAMSAKALDYHQRLTDFMVEHVFPAEADYHRYR
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EEAGPKDHTVPPVVEDLKKLAKERGLWNLFLPSESGLSNLEYAELAELSGWSMEIAPEVI
HHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEECHHHH
NCAAPDTGNMETLHLFANDEQRKQWLDPLLNGEIRSAFAMTEPAVASSDARNIETTMLRD
HCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHEEEC
GSDYVINGRKWWITGAADPRCKLLIVMGRTNPDAASHQQQSMILVPADTPGVDIQRSLPV
CCCEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
FGWQDQHGHCEIVFDNVRVPVENLLHEEGSGFAIAQARLGPGRIHHCMRALGAAERALAL
CCCCCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
MIDRVQKRVAFGKPLAEQGVVREAIAKSRNEIDMARLLCHKAAWTIDQEGNKAAHVLVSQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEECCCCCHHHHHHHHH
IKSVAPQVACDVIDRAIQVHGGAGVSDDFPLARLYAWHRAMRLFDGPDEVHMRTIARAEL
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GREKSPFAAAVCR
CCCCCCCHHHHCC
>Mature Secondary Structure
MERRALGHRQWPGGPSAWASSYRDGMDFAMSAKALDYHQRLTDFMVEHVFPAEADYHRYR
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EEAGPKDHTVPPVVEDLKKLAKERGLWNLFLPSESGLSNLEYAELAELSGWSMEIAPEVI
HHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEECHHHH
NCAAPDTGNMETLHLFANDEQRKQWLDPLLNGEIRSAFAMTEPAVASSDARNIETTMLRD
HCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHEEEC
GSDYVINGRKWWITGAADPRCKLLIVMGRTNPDAASHQQQSMILVPADTPGVDIQRSLPV
CCCEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
FGWQDQHGHCEIVFDNVRVPVENLLHEEGSGFAIAQARLGPGRIHHCMRALGAAERALAL
CCCCCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
MIDRVQKRVAFGKPLAEQGVVREAIAKSRNEIDMARLLCHKAAWTIDQEGNKAAHVLVSQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEECCCCCHHHHHHHHH
IKSVAPQVACDVIDRAIQVHGGAGVSDDFPLARLYAWHRAMRLFDGPDEVHMRTIARAEL
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GREKSPFAAAVCR
CCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]