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The map label for this gene is 108797067

Identifier: 108797067

GI number: 108797067

Start: 101422

End: 102039

Strand: Reverse

Name: 108797067

Synonym: Mmcs_0086

Alternate gene names: NA

Gene position: 102039-101422 (Counterclockwise)

Preceding gene: 108797077

Following gene: 108797066

Centisome position: 1.79

GC content: 67.15

Gene sequence:

>618_bases
ATGTGGCGGCGTCGGCCACAAAATCAGTCGCAGCAACTATTGTTTCGTCTCATGGGGGCGGTGGTCACTCGGGAGGGGTA
CTTCGAAACGGGCCTCGCGGTGCTCGCCGATCAGGGGTACGGCGGGCTGAAGCTCGCCGAGGTCTGCCACCGACTGGGCG
TCACGACGGGGTCGTTCTACCACTACTTCGCGAACTGGTCGGCCTATACGCGTGAGCTCGTCGAGTACTGGCGACAGCAG
GCCACGGTGCGGATCGTGGAGGCGGTCCGCGCGGAGAAAGATCCGCACCGCCGCATCGAGACCTTGATCGAGGAGGCGCT
CGCGCTGCCGCACGGCGCCGAGGCGGCGATCCGGGTCTGGAGTTCGATCGACCCGGACGTGCACGCCGTCCAGGCCGCGG
TGGACCGTCAGCGGTACGACATCATGCGTGAGTCCTCGCTCGAGGTCGTCGGCGACGAGCGGCAGGCGGAGGTCTTCGCG
GCTTGTTGCGTCTACATCCTGGTCGGGTACGAACAGGCCACCATCCCGCCCGACAACGTCGCGCTGCGTTGGCTCGCCGC
CGAGATGCTGCACACGCTGGACTCCGGCCGCTTGAACTCACTGCCCGACGCCCGCTGA

Upstream 100 bases:

>100_bases
ATAGGTAACGTTCTGTACCTGCACGTGGTGTCCTTCGTGCGCCCGAGGCTGCACTTTCAGCAAATCGCGGCGGCGGGCCG
CGAAATAGTCGCGGCGGGCC

Downstream 100 bases:

>100_bases
GCGTCGCCGCGGCGGTCTACCATCAGCGGTCATGCTGACCCCGGCCGTCCTGTGGCGCCGGGCCGCCGACCGCATCCAGC
GCCGTGACCCCGAACGGGAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR Family Regulatory Protein

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MWRRRPQNQSQQLLFRLMGAVVTREGYFETGLAVLADQGYGGLKLAEVCHRLGVTTGSFYHYFANWSAYTRELVEYWRQQ
ATVRIVEAVRAEKDPHRRIETLIEEALALPHGAEAAIRVWSSIDPDVHAVQAAVDRQRYDIMRESSLEVVGDERQAEVFA
ACCVYILVGYEQATIPPDNVALRWLAAEMLHTLDSGRLNSLPDAR

Sequences:

>Translated_205_residues
MWRRRPQNQSQQLLFRLMGAVVTREGYFETGLAVLADQGYGGLKLAEVCHRLGVTTGSFYHYFANWSAYTRELVEYWRQQ
ATVRIVEAVRAEKDPHRRIETLIEEALALPHGAEAAIRVWSSIDPDVHAVQAAVDRQRYDIMRESSLEVVGDERQAEVFA
ACCVYILVGYEQATIPPDNVALRWLAAEMLHTLDSGRLNSLPDAR
>Mature_205_residues
MWRRRPQNQSQQLLFRLMGAVVTREGYFETGLAVLADQGYGGLKLAEVCHRLGVTTGSFYHYFANWSAYTRELVEYWRQQ
ATVRIVEAVRAEKDPHRRIETLIEEALALPHGAEAAIRVWSSIDPDVHAVQAAVDRQRYDIMRESSLEVVGDERQAEVFA
ACCVYILVGYEQATIPPDNVALRWLAAEMLHTLDSGRLNSLPDAR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23290; Mature: 23290

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRRRPQNQSQQLLFRLMGAVVTREGYFETGLAVLADQGYGGLKLAEVCHRLGVTTGSFY
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHH
HYFANWSAYTRELVEYWRQQATVRIVEAVRAEKDPHRRIETLIEEALALPHGAEAAIRVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
SSIDPDVHAVQAAVDRQRYDIMRESSLEVVGDERQAEVFAACCVYILVGYEQATIPPDNV
HCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ALRWLAAEMLHTLDSGRLNSLPDAR
HHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MWRRRPQNQSQQLLFRLMGAVVTREGYFETGLAVLADQGYGGLKLAEVCHRLGVTTGSFY
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHH
HYFANWSAYTRELVEYWRQQATVRIVEAVRAEKDPHRRIETLIEEALALPHGAEAAIRVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
SSIDPDVHAVQAAVDRQRYDIMRESSLEVVGDERQAEVFAACCVYILVGYEQATIPPDNV
HCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ALRWLAAEMLHTLDSGRLNSLPDAR
HHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA