| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108764096
Identifier: 108764096
GI number: 108764096
Start: 160655
End: 162178
Strand: Reverse
Name: 108764096
Synonym: MXAN_0138
Alternate gene names: NA
Gene position: 162178-160655 (Counterclockwise)
Preceding gene: 108758657
Following gene: 108756899
Centisome position: 1.77
GC content: 67.45
Gene sequence:
>1524_bases GTGGGCACATCCAGGACGATGTTCGACGTGGTGGTGGTGGGTGGTGGCGCTTGCGGCGGATGGACAGCCAAGCAGCTGAC GGAAGCAGGCTTGCGTGTCCTGGTGCTCGAAGCGGGCCGAGGCATGGGCGCGGACCGGATGCTGTGGATGCTCCACCGCA TGCGCCAATCCCTTGGCTACCTGGCGGAGACGGACGACCAGCGCAAGGTGCGCCAGTCGGTGCAGAGCACCACCTTCGCG TGGCCCTTCCACCCGCACGCCTTCGTCGACGACGTGGACAATCCCTACACCACGCCGGAGGACCAGCCCTTCACGTGGAT TCGTGCGCGGCAGGTGGGCGGGCGCACGTCCGTGAAGGCACACGGGCGCCAGTTCTACCGGCTGTCTGACTTCAACTTCA AAGCAGGCACGCAGGATGGACAGGGACCGGACTGGCCGCTGACGCTGGCGGACCTGGCGCCGCACTACGAGACGGTGGAG CGGTGGATGGGCATCCACGGCAACGCGGATGGCCTGGACATTCTGCCGGACTCCGTCTTCGCGGGTTCCATCACCATGAC GCCCGCGGAGCAGCGCCTGAAGGAACAGGTGGAGCGCCGCTGGCCGGAACGCCGCGTCATCGTCCGCCGCACCGCGGGAG CGCCCGTGACGATGCCCGCCGCGTTGAAGACGGGCCGGCTCGCGCTGCGCACGAACGCGGTGGTGGACCAGGTGCTGTAC GACGCGGCGACAGGGCGTGCCACGGGGGTGCACTACCTCGACGCGAGGTCGGGCAAGTCCTACGAAGCCCACGCGCGGGT GGTGGTGCTGGCGGCGGGCGCGATTGAATCCACGCGGCTGCTGCTGAACTCGCGATGCAGCGCGTTCCCGGACGGATTGG CGAACACGTCGGGGCAGTTGGGCCGCAACCTGATGGACCACACGTACATGCTGGGCATCGAGGCGAAGATGAACCTGCCT CCCGAAGCCCAGCGGCAGGAGCATAGCTGGGCGTACATCCCCCAGTTCCGCAACGTGGCCACGAAGGAGCAGGACTTCGC GCGCGGCTACGGCGTGCAGGTCTTCACCTTTGGAGACAACTGCCACTTCGTGCCCTTCGGGGAGATGGTGCCGCGCGCGG AGAACCGCGTGACGCTCAGTCCGACGGTGAAGGACCGCTGGGGCATCCCCGCCGCGCACATCGAATGCCGACACTCCGCC AACGAGCTGAAGATGGCCGAGGACGCGCTGGCGGCTTGCAAGGAGATGATGGAAGCAGCCGGCTTCACCGTCGAGAAGGC CAACGCCACGTTGTCCACGCCGGGCATGGCCATCCACGAGGTGGGCACGGCGCGCATGGGCACGGACGCGAAGACGTCGG TGCTCAATCCCCACAACCAGAGCTGGGACGTGCCCAACCTCTTCATCAACGACGGTGCCTGCTTCCCGTCCCAGGGACCG CAGAACCCCACGCTGACGATGATGGCCATCGCCGTGCGCGCCAGTGCGCACATCGTGAAGGAGTTCAAGGCCGGGCGGCT GTGA
Upstream 100 bases:
>100_bases AGACGGGACCCACGTTGCTCCGCCACGTACTGAGCAGCTTACACTCCACATAGACAACTCACAGTGCCATCAAAGACGGC ACTGTCGCGCCAGGAAACCT
Downstream 100 bases:
>100_bases CGGGGTGGCGAGCGTTGCCGCTCCGGCGCTGCATGCCGTAGCGTGCTCGCGATGATTCAAGTCGACGAGCTCGGAGAAAA GACGACGTTCGCTGAGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase; Choline Dehydrogenase; Gluconate 2-Dehydrogenase; GMC Family Oxidoreductase; 2-Keto-Gluconate Dehydrogenase; GMC Oxidoreductase Family Protein; Oxidoreductase Protein; FAD Dependent Oxidoreductase; Dehydrogenase; GMC Oxidoreductase Family; Oxidoreductase GMC Family; Glucoside 3-Dehydrogenase; Choline Dehydrogenase-Like Flavoprotein; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Glucose Dehydrogenase Subunit Alpha; Oxidoreductase-Like Protein; Fad Dependent Oxidoreductase; Dehydrogenase-Like Protein; Glucose Dehydrogenase; Choline Dehydrogenase And Flavoproteins-Like Protein; Dehydrogluconate Dehydrogenase; Dehydrogenase Oxidoreductase Protein; Dehydrogenase Flavoprotein Subunit; Glucase Dehydrogenase Subunit Alpha; GMC Oxidoreductase; Flavoproteins Oxidoreductases; Oxidoreductase Chain; Gluconate Dehydrogenase; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit; Pyranose Oxidase; Capsular Polysaccharide Biosynthesis Oxidoreductase; Gluconate 2-Dehydrogenase Alpha Chain
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MGTSRTMFDVVVVGGGACGGWTAKQLTEAGLRVLVLEAGRGMGADRMLWMLHRMRQSLGYLAETDDQRKVRQSVQSTTFA WPFHPHAFVDDVDNPYTTPEDQPFTWIRARQVGGRTSVKAHGRQFYRLSDFNFKAGTQDGQGPDWPLTLADLAPHYETVE RWMGIHGNADGLDILPDSVFAGSITMTPAEQRLKEQVERRWPERRVIVRRTAGAPVTMPAALKTGRLALRTNAVVDQVLY DAATGRATGVHYLDARSGKSYEAHARVVVLAAGAIESTRLLLNSRCSAFPDGLANTSGQLGRNLMDHTYMLGIEAKMNLP PEAQRQEHSWAYIPQFRNVATKEQDFARGYGVQVFTFGDNCHFVPFGEMVPRAENRVTLSPTVKDRWGIPAAHIECRHSA NELKMAEDALAACKEMMEAAGFTVEKANATLSTPGMAIHEVGTARMGTDAKTSVLNPHNQSWDVPNLFINDGACFPSQGP QNPTLTMMAIAVRASAHIVKEFKAGRL
Sequences:
>Translated_507_residues MGTSRTMFDVVVVGGGACGGWTAKQLTEAGLRVLVLEAGRGMGADRMLWMLHRMRQSLGYLAETDDQRKVRQSVQSTTFA WPFHPHAFVDDVDNPYTTPEDQPFTWIRARQVGGRTSVKAHGRQFYRLSDFNFKAGTQDGQGPDWPLTLADLAPHYETVE RWMGIHGNADGLDILPDSVFAGSITMTPAEQRLKEQVERRWPERRVIVRRTAGAPVTMPAALKTGRLALRTNAVVDQVLY DAATGRATGVHYLDARSGKSYEAHARVVVLAAGAIESTRLLLNSRCSAFPDGLANTSGQLGRNLMDHTYMLGIEAKMNLP PEAQRQEHSWAYIPQFRNVATKEQDFARGYGVQVFTFGDNCHFVPFGEMVPRAENRVTLSPTVKDRWGIPAAHIECRHSA NELKMAEDALAACKEMMEAAGFTVEKANATLSTPGMAIHEVGTARMGTDAKTSVLNPHNQSWDVPNLFINDGACFPSQGP QNPTLTMMAIAVRASAHIVKEFKAGRL >Mature_506_residues GTSRTMFDVVVVGGGACGGWTAKQLTEAGLRVLVLEAGRGMGADRMLWMLHRMRQSLGYLAETDDQRKVRQSVQSTTFAW PFHPHAFVDDVDNPYTTPEDQPFTWIRARQVGGRTSVKAHGRQFYRLSDFNFKAGTQDGQGPDWPLTLADLAPHYETVER WMGIHGNADGLDILPDSVFAGSITMTPAEQRLKEQVERRWPERRVIVRRTAGAPVTMPAALKTGRLALRTNAVVDQVLYD AATGRATGVHYLDARSGKSYEAHARVVVLAAGAIESTRLLLNSRCSAFPDGLANTSGQLGRNLMDHTYMLGIEAKMNLPP EAQRQEHSWAYIPQFRNVATKEQDFARGYGVQVFTFGDNCHFVPFGEMVPRAENRVTLSPTVKDRWGIPAAHIECRHSAN ELKMAEDALAACKEMMEAAGFTVEKANATLSTPGMAIHEVGTARMGTDAKTSVLNPHNQSWDVPNLFINDGACFPSQGPQ NPTLTMMAIAVRASAHIVKEFKAGRL
Specific function: Unknown
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55836; Mature: 55705
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSRTMFDVVVVGGGACGGWTAKQLTEAGLRVLVLEAGRGMGADRMLWMLHRMRQSLGY CCCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC LAETDDQRKVRQSVQSTTFAWPFHPHAFVDDVDNPYTTPEDQPFTWIRARQVGGRTSVKA HHCCCHHHHHHHHHHHCEEECCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHH HGRQFYRLSDFNFKAGTQDGQGPDWPLTLADLAPHYETVERWMGIHGNADGLDILPDSVF CCCEEEEEECCCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEE AGSITMTPAEQRLKEQVERRWPERRVIVRRTAGAPVTMPAALKTGRLALRTNAVVDQVLY ECEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHCCCCEEEEHHHHHHHHHH DAATGRATGVHYLDARSGKSYEAHARVVVLAAGAIESTRLLLNSRCSAFPDGLANTSGQL HHCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHH GRNLMDHTYMLGIEAKMNLPPEAQRQEHSWAYIPQFRNVATKEQDFARGYGVQVFTFGDN HHHHHHCEEEEEEEEECCCCCHHHHCCCCEEECHHHHHHHCCHHHHHCCCCEEEEEECCC CHFVPFGEMVPRAENRVTLSPTVKDRWGIPAAHIECRHSANELKMAEDALAACKEMMEAA CEEEECHHHCCCCCCCEEECCCCHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHC GFTVEKANATLSTPGMAIHEVGTARMGTDAKTSVLNPHNQSWDVPNLFINDGACFPSQGP CCEEEECCCEECCCCCEEECCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCC QNPTLTMMAIAVRASAHIVKEFKAGRL CCCCEEEHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GTSRTMFDVVVVGGGACGGWTAKQLTEAGLRVLVLEAGRGMGADRMLWMLHRMRQSLGY CCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC LAETDDQRKVRQSVQSTTFAWPFHPHAFVDDVDNPYTTPEDQPFTWIRARQVGGRTSVKA HHCCCHHHHHHHHHHHCEEECCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHH HGRQFYRLSDFNFKAGTQDGQGPDWPLTLADLAPHYETVERWMGIHGNADGLDILPDSVF CCCEEEEEECCCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEE AGSITMTPAEQRLKEQVERRWPERRVIVRRTAGAPVTMPAALKTGRLALRTNAVVDQVLY ECEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHCCCCEEEEHHHHHHHHHH DAATGRATGVHYLDARSGKSYEAHARVVVLAAGAIESTRLLLNSRCSAFPDGLANTSGQL HHCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHH GRNLMDHTYMLGIEAKMNLPPEAQRQEHSWAYIPQFRNVATKEQDFARGYGVQVFTFGDN HHHHHHCEEEEEEEEECCCCCHHHHCCCCEEECHHHHHHHCCHHHHHCCCCEEEEEECCC CHFVPFGEMVPRAENRVTLSPTVKDRWGIPAAHIECRHSANELKMAEDALAACKEMMEAA CEEEECHHHCCCCCCCEEECCCCHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHC GFTVEKANATLSTPGMAIHEVGTARMGTDAKTSVLNPHNQSWDVPNLFINDGACFPSQGP CCEEEECCCEECCCCCEEECCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCC QNPTLTMMAIAVRASAHIVKEFKAGRL CCCCEEEHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA