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The map label for this gene is nodI [H]

Identifier: 108764010

GI number: 108764010

Start: 727476

End: 728174

Strand: Reverse

Name: nodI [H]

Synonym: MXAN_0629

Alternate gene names: 108764010

Gene position: 728174-727476 (Counterclockwise)

Preceding gene: 108757045

Following gene: 108764032

Centisome position: 7.97

GC content: 71.96

Gene sequence:

>699_bases
TTGAAAGCCGTCCCCCCGGCATCAAGAAAGGAGCGCAGCGCCGTGATTCAAGCCAGGGACCTGGGCGCCGGCTATGGCCC
TCGCGCGGTGCTTGCGAAGCTCTCTTTCGATTTGCCCTGGCGGCGCGCCAGCGTGGTGCTGGGCCCGGGTGGCAGTGGCA
AGAGCACCCTGCTGCGGGCCCTGGTCAACGACCGGCTCGGAGACGGCGCTGACTTCTGGGTGCGGGGCCAGCTCACCCTT
CCCGTATCGGCGCAGGCGGTGGTGCCCCAAGGCCGGCCCGCGGAGTCCCGCACACTGGGCGAGCTGCTCGGCCCCGATGC
GCGCCAGACGCTGGAGTCCGTGTGGGCCTGCGCGCCAGCGGCGGCGGTGCGGCTGGACCGCCTGCGCGAGCGGCCGGTGG
CGCTGCTGCCCGAAGGGCTGTGGCGGCTGGCCCTGCTCACCGTCGCCATCGCCAACAAGGCGCCCCTGGTCCTCCTGGAC
GAGCCCGAAGTGGGACTGTCGGGAGACGGCGTCCGCTGGTTGGCGCGGCGGCTGCTGATGCTGCGGGCCGAGCGCACGGT
GGTGCTCGTCACGCAGCACCTCCCGCTGGCGCGCATGGTCGCCGACCACGTGCTGCTCCTTGATGAAGGGATGCTCGTGG
ACCAGGCCCCGCCCCGTCACTTCTTCGACGAGCCTGAGCTCCGTCGCCACACCTGCTGA

Upstream 100 bases:

>100_bases
GCGCGGAGTGGCGGGAGACACTGGAGCGGCTCGCCACGGGCCTCCTGGGCGAACACGGCGCGGTGCCTCTTCCCGAACAG
GAGGCACTGGCCGCCCCCCG

Downstream 100 bases:

>100_bases
CGGTTCAGCGTGACACGCCACACCGTTCCACCGCGCCGCTCGCTTCAGGCGGGCGCGGGCATGGGCGCTGGCCGCAGACG
TGAGGTGGCGAAGAGGGTGG

Product: ABC transporter ATP-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: Nodulation ATP-binding protein I [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKAVPPASRKERSAVIQARDLGAGYGPRAVLAKLSFDLPWRRASVVLGPGGSGKSTLLRALVNDRLGDGADFWVRGQLTL
PVSAQAVVPQGRPAESRTLGELLGPDARQTLESVWACAPAAAVRLDRLRERPVALLPEGLWRLALLTVAIANKAPLVLLD
EPEVGLSGDGVRWLARRLLMLRAERTVVLVTQHLPLARMVADHVLLLDEGMLVDQAPPRHFFDEPELRRHTC

Sequences:

>Translated_232_residues
MKAVPPASRKERSAVIQARDLGAGYGPRAVLAKLSFDLPWRRASVVLGPGGSGKSTLLRALVNDRLGDGADFWVRGQLTL
PVSAQAVVPQGRPAESRTLGELLGPDARQTLESVWACAPAAAVRLDRLRERPVALLPEGLWRLALLTVAIANKAPLVLLD
EPEVGLSGDGVRWLARRLLMLRAERTVVLVTQHLPLARMVADHVLLLDEGMLVDQAPPRHFFDEPELRRHTC
>Mature_232_residues
MKAVPPASRKERSAVIQARDLGAGYGPRAVLAKLSFDLPWRRASVVLGPGGSGKSTLLRALVNDRLGDGADFWVRGQLTL
PVSAQAVVPQGRPAESRTLGELLGPDARQTLESVWACAPAAAVRLDRLRERPVALLPEGLWRLALLTVAIANKAPLVLLD
EPEVGLSGDGVRWLARRLLMLRAERTVVLVTQHLPLARMVADHVLLLDEGMLVDQAPPRHFFDEPELRRHTC

Specific function: Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG1126

COG function: function code E; ABC-type polar amino acid transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015851
- InterPro:   IPR005978
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 25289; Mature: 25289

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVPPASRKERSAVIQARDLGAGYGPRAVLAKLSFDLPWRRASVVLGPGGSGKSTLLRA
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
LVNDRLGDGADFWVRGQLTLPVSAQAVVPQGRPAESRTLGELLGPDARQTLESVWACAPA
HHHHCCCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCHH
AAVRLDRLRERPVALLPEGLWRLALLTVAIANKAPLVLLDEPEVGLSGDGVRWLARRLLM
HHHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
LRAERTVVLVTQHLPLARMVADHVLLLDEGMLVDQAPPRHFFDEPELRRHTC
HHCCCEEEEEECCCCHHHHHHHHHHEECCCEEECCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKAVPPASRKERSAVIQARDLGAGYGPRAVLAKLSFDLPWRRASVVLGPGGSGKSTLLRA
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
LVNDRLGDGADFWVRGQLTLPVSAQAVVPQGRPAESRTLGELLGPDARQTLESVWACAPA
HHHHCCCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCHH
AAVRLDRLRERPVALLPEGLWRLALLTVAIANKAPLVLLDEPEVGLSGDGVRWLARRLLM
HHHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
LRAERTVVLVTQHLPLARMVADHVLLLDEGMLVDQAPPRHFFDEPELRRHTC
HHCCCEEEEEECCCCHHHHHHHHHHEECCCEEECCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]